Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_11565

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
2,618,518	+				+0.0
2,618,518	+				-0.6
2,618,518	+				-0.1
2,618,518	+				+0.6
2,618,518	+				+1.1
2,618,518	+				-0.0
2,618,519	-				+0.4
2,618,519	-				-0.3
2,618,519	-				-0.5
2,618,519	-				-0.2
2,618,519	-				+0.1
2,618,519	-				+0.6
2,618,519	-				+0.0
2,618,519	-				-0.3
2,618,923	+				+0.3
2,618,924	-				+0.9
2,618,936	+				-1.0
2,618,936	+				-0.1
2,618,936	+				-0.1
2,618,936	+				-0.4
2,618,936	+				+0.3
2,618,936	+				+0.3
2,618,936	+				-0.2
2,618,936	+				-0.0
2,618,936	+				+1.0
2,618,936	+				-0.0
2,618,936	+				+0.1
2,618,937	-				-1.1
2,618,937	-				+0.9
2,618,937	-				+0.3
2,618,937	-				+0.6
2,618,937	-				-0.3
2,618,937	-				-0.2
2,618,937	-				+0.9
2,618,937	-				+0.6
2,618,937	-				-0.5
2,618,937	-				-0.4
2,618,937	-				+0.5
2,618,937	-				+1.0
2,618,942	+				-0.3
2,618,942	+				-1.3
2,618,942	+				+0.3
2,618,942	+				-0.5
2,618,942	+				-0.2
2,618,942	+				-0.9
2,618,942	+				-0.0
2,618,942	+				-0.3
2,618,943	-				+1.0
2,618,943	-				+0.1
2,618,943	-				-1.5
2,618,943	-				+0.0
2,618,943	-				+0.4
2,618,943	-				-0.4
2,619,316	+				+0.5
2,619,316	+				-0.9
2,619,316	+				-0.0
2,619,316	+				+0.3
2,619,316	+				-0.9
2,619,317	-				-0.1
2,619,317	-				+0.6
2,619,317	-				-0.3
2,619,317	-				+0.9
2,619,317	-				-0.4
2,619,317	-				-0.1
2,619,317	-				-0.5
2,619,317	-				-0.1
2,619,356	+				+0.1
2,619,356	+				+0.7
2,619,356	+				-2.2
2,619,357	-				+0.2
2,619,364	+				-0.8
2,619,364	+				+0.3
2,619,364	+				+1.1
2,619,365	-				+1.6
2,619,374	+				-0.4
2,619,374	+				-1.1
2,619,374	+				-0.0
2,619,374	+				-0.7
2,619,374	+				-0.2
2,619,374	+				-0.3
2,619,375	-				+0.6
2,619,442	+		AO356_11565	0.10	+0.2
2,619,442	+		AO356_11565	0.10	+0.4
2,619,442	+		AO356_11565	0.10	+0.7
2,619,443	-		AO356_11565	0.10	+0.4
2,619,443	-		AO356_11565	0.10	-0.2
2,619,443	-		AO356_11565	0.10	+1.2
2,619,443	-		AO356_11565	0.10	+0.2
2,619,443	-		AO356_11565	0.10	-1.2
2,619,443	-		AO356_11565	0.10	-0.4
2,619,443	-		AO356_11565	0.10	-0.4
2,619,743	+		AO356_11565	0.48	+1.1
2,619,743	+		AO356_11565	0.48	+0.0
2,619,743	+		AO356_11565	0.48	-0.7
2,619,743	+		AO356_11565	0.48	-0.3
2,619,743	+		AO356_11565	0.48	-0.2
2,619,744	-		AO356_11565	0.48	+0.9
2,619,744	-		AO356_11565	0.48	+0.3
2,619,744	-		AO356_11565	0.48	+1.0
2,619,744	-		AO356_11565	0.48	+1.0
2,619,787	+		AO356_11565	0.54	-0.3
2,619,787	+		AO356_11565	0.54	-2.4
2,619,787	+		AO356_11565	0.54	+0.4
2,619,788	-		AO356_11565	0.54	-0.4
2,620,050	+		AO356_11565	0.87	+0.6
2,620,050	+		AO356_11565	0.87	+1.1
2,620,050	+		AO356_11565	0.87	-0.2
2,620,050	+		AO356_11565	0.87	+0.9
2,620,050	+		AO356_11565	0.87	+0.1
2,620,050	+		AO356_11565	0.87	+0.3
2,620,050	+		AO356_11565	0.87	-0.6
2,620,050	+		AO356_11565	0.87	+0.5
2,620,050	+		AO356_11565	0.87	-0.3
2,620,050	+		AO356_11565	0.87	+0.3
2,620,050	+		AO356_11565	0.87	+0.8
2,620,050	+		AO356_11565	0.87	+0.1
2,620,051	-		AO356_11565	0.87	+0.5
2,620,051	-		AO356_11565	0.87	+0.8
2,620,051	-		AO356_11565	0.87	+0.4
2,620,051	-		AO356_11565	0.87	-0.2
2,620,051	-		AO356_11565	0.87	-1.0
2,620,051	-		AO356_11565	0.87	+0.8
2,620,051	-		AO356_11565	0.87	+0.2
2,620,170	-				+0.6
2,620,192	-				-0.4
2,620,192	-				+0.4
2,620,222	+				-1.1
2,620,222	+				+0.1
2,620,222	+				+0.3
2,620,222	+				-0.9
2,620,222	+				-1.8
2,620,222	+				+0.6
2,620,222	+				+0.5
2,620,223	-				+0.6
2,620,223	-				+0.2
2,620,223	-				+0.0
2,620,223	-				-0.0
2,620,267	+				+0.3
2,620,267	+				+0.6
2,620,267	+				-0.1
2,620,267	+				+0.1
2,620,268	-				-0.4
2,620,268	-				+1.1
2,620,345	-				-0.3
2,620,412	-				+0.7
2,620,622	+		AO356_11570	0.27	-0.6
2,620,635	-		AO356_11570	0.29	-0.9
2,620,821	-		AO356_11570	0.55	-0.4
2,620,821	-		AO356_11570	0.55	-0.1
2,620,821	-		AO356_11570	0.55	+0.2
2,620,922	+		AO356_11570	0.69	+0.4
2,620,922	+		AO356_11570	0.69	+0.1
2,620,923	-		AO356_11570	0.69	+0.5
2,620,966	-		AO356_11570	0.75	+0.2
2,620,966	-		AO356_11570	0.75	+1.1
2,621,015	+		AO356_11570	0.82	+1.2
2,621,015	+		AO356_11570	0.82	-0.2
2,621,015	+		AO356_11570	0.82	+1.2
2,621,015	+		AO356_11570	0.82	-0.4
2,621,015	+		AO356_11570	0.82	+0.8
2,621,015	+		AO356_11570	0.82	+0.6
2,621,015	+		AO356_11570	0.82	+0.5
2,621,016	-		AO356_11570	0.82	-0.2
2,621,016	-		AO356_11570	0.82	+0.7
2,621,016	-		AO356_11570	0.82	-0.7
2,621,016	-		AO356_11570	0.82	-0.1
2,621,016	-		AO356_11570	0.82	+0.4
2,621,016	-		AO356_11570	0.82	+0.4
2,621,016	-		AO356_11570	0.82	-0.2
2,621,016	-		AO356_11570	0.82	+0.4
2,621,016	-		AO356_11570	0.82	-0.4
2,621,016	-		AO356_11570	0.82	-0.2
2,621,016	-		AO356_11570	0.82	-0.6
2,621,016	-		AO356_11570	0.82	+0.8
2,621,016	-		AO356_11570	0.82	-0.4
2,621,050	+		AO356_11570	0.86	-0.3
2,621,050	+		AO356_11570	0.86	-0.3
2,621,050	+		AO356_11570	0.86	-0.2
2,621,051	-		AO356_11570	0.87	-0.8
2,621,051	-		AO356_11570	0.87	-0.0
2,621,121	+				+0.2
2,621,121	+				-0.3
2,621,121	+				-0.9
2,621,121	+				+0.2
2,621,121	+				+0.2
2,621,122	-				-0.8
2,621,122	-				+0.8