Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_07510 and AO356_07515 are separated by 75 nucleotides AO356_07515 and AO356_07520 are separated by 97 nucleotides AO356_07520 and AO356_07525 are separated by 59 nucleotides AO356_07525 and AO356_07530 overlap by 4 nucleotides
AO356_07510: AO356_07510 - DNA repair protein RecN, at 1,663,384 to 1,665,057
_07510
AO356_07515: AO356_07515 - Fur family transcriptional regulator, at 1,665,133 to 1,665,537
_07515
AO356_07520: AO356_07520 - hypothetical protein, at 1,665,635 to 1,666,162
_07520
AO356_07525: AO356_07525 - protein RnfH, at 1,666,222 to 1,666,524
_07525
AO356_07530: AO356_07530 - ribosome association toxin RatA, at 1,666,521 to 1,666,964
_07530
Position (kb)
1665
1666 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1664.281 kb on + strand, within AO356_07510 at 1664.282 kb on - strand, within AO356_07510 at 1664.282 kb on - strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.308 kb on + strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.309 kb on - strand, within AO356_07510 at 1664.310 kb on + strand, within AO356_07510 at 1664.311 kb on - strand, within AO356_07510 at 1664.311 kb on - strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.440 kb on + strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.441 kb on - strand, within AO356_07510 at 1664.453 kb on - strand, within AO356_07510 at 1664.453 kb on - strand, within AO356_07510 at 1664.756 kb on + strand, within AO356_07510 at 1664.756 kb on + strand, within AO356_07510 at 1664.757 kb on - strand, within AO356_07510 at 1664.757 kb on - strand, within AO356_07510 at 1664.894 kb on + strand at 1664.894 kb on + strand at 1664.895 kb on - strand at 1665.134 kb on + strand at 1665.134 kb on + strand at 1665.135 kb on - strand at 1665.135 kb on - strand at 1665.135 kb on - strand at 1666.160 kb on + strand at 1666.224 kb on - strand at 1666.502 kb on + strand at 1666.502 kb on + strand at 1666.503 kb on - strand at 1666.503 kb on - strand at 1666.503 kb on - strand at 1666.514 kb on - strand at 1666.514 kb on - strand at 1666.514 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium acetate 5 mM remove 1,664,281 + AO356_07510 0.54 -0.9 1,664,282 - AO356_07510 0.54 -0.5 1,664,282 - AO356_07510 0.54 -0.4 1,664,308 + AO356_07510 0.55 -1.2 1,664,308 + AO356_07510 0.55 -0.3 1,664,308 + AO356_07510 0.55 +0.9 1,664,308 + AO356_07510 0.55 -0.3 1,664,308 + AO356_07510 0.55 -0.1 1,664,308 + AO356_07510 0.55 -0.2 1,664,308 + AO356_07510 0.55 -0.3 1,664,308 + AO356_07510 0.55 +0.1 1,664,308 + AO356_07510 0.55 +0.1 1,664,308 + AO356_07510 0.55 -1.0 1,664,308 + AO356_07510 0.55 +0.6 1,664,308 + AO356_07510 0.55 -0.6 1,664,308 + AO356_07510 0.55 -0.3 1,664,308 + AO356_07510 0.55 -0.7 1,664,308 + AO356_07510 0.55 -1.0 1,664,308 + AO356_07510 0.55 -1.1 1,664,308 + AO356_07510 0.55 -0.0 1,664,308 + AO356_07510 0.55 +0.7 1,664,308 + AO356_07510 0.55 -0.1 1,664,309 - AO356_07510 0.55 +0.8 1,664,309 - AO356_07510 0.55 +0.1 1,664,309 - AO356_07510 0.55 -2.0 1,664,309 - AO356_07510 0.55 -0.7 1,664,309 - AO356_07510 0.55 +0.4 1,664,309 - AO356_07510 0.55 +0.7 1,664,309 - AO356_07510 0.55 -1.4 1,664,309 - AO356_07510 0.55 -1.3 1,664,309 - AO356_07510 0.55 +1.7 1,664,309 - AO356_07510 0.55 -0.0 1,664,309 - AO356_07510 0.55 +0.1 1,664,309 - AO356_07510 0.55 +1.1 1,664,309 - AO356_07510 0.55 +0.4 1,664,309 - AO356_07510 0.55 -1.2 1,664,309 - AO356_07510 0.55 +1.3 1,664,309 - AO356_07510 0.55 -0.5 1,664,309 - AO356_07510 0.55 -0.2 1,664,309 - AO356_07510 0.55 -0.8 1,664,310 + AO356_07510 0.55 +0.3 1,664,311 - AO356_07510 0.55 +0.5 1,664,311 - AO356_07510 0.55 -1.1 1,664,440 + AO356_07510 0.63 +1.5 1,664,440 + AO356_07510 0.63 -0.3 1,664,440 + AO356_07510 0.63 +1.1 1,664,440 + AO356_07510 0.63 +0.2 1,664,440 + AO356_07510 0.63 -0.6 1,664,440 + AO356_07510 0.63 -0.3 1,664,440 + AO356_07510 0.63 +0.1 1,664,440 + AO356_07510 0.63 -1.0 1,664,440 + AO356_07510 0.63 -0.5 1,664,441 - AO356_07510 0.63 -0.6 1,664,441 - AO356_07510 0.63 -0.0 1,664,441 - AO356_07510 0.63 -1.1 1,664,441 - AO356_07510 0.63 +0.2 1,664,441 - AO356_07510 0.63 +0.2 1,664,441 - AO356_07510 0.63 -0.9 1,664,441 - AO356_07510 0.63 -0.3 1,664,441 - AO356_07510 0.63 +0.2 1,664,441 - AO356_07510 0.63 -0.7 1,664,453 - AO356_07510 0.64 -0.1 1,664,453 - AO356_07510 0.64 -0.2 1,664,756 + AO356_07510 0.82 -1.6 1,664,756 + AO356_07510 0.82 +0.9 1,664,757 - AO356_07510 0.82 +0.8 1,664,757 - AO356_07510 0.82 -1.7 1,664,894 + +0.1 1,664,894 + -0.3 1,664,895 - -0.3 1,665,134 + -2.3 1,665,134 + -1.1 1,665,135 - +1.1 1,665,135 - +0.3 1,665,135 - +1.0 1,666,160 + +0.8 1,666,224 - -0.3 1,666,502 + -0.4 1,666,502 + -1.8 1,666,503 - -0.3 1,666,503 - -0.2 1,666,503 - -1.1 1,666,514 - -0.9 1,666,514 - -3.1 1,666,514 - -0.5
Or see this region's nucleotide sequence