Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04720

Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 5 mM
1,060,220	+				+1.2
1,060,230	+				-0.3
1,060,230	+				+0.2
1,060,230	+				+0.2
1,060,230	+				+0.7
1,060,231	-				-0.0
1,060,231	-				+0.1
1,060,280	+				-0.2
1,060,302	+				-1.4
1,060,302	+				-0.8
1,060,320	+				+1.4
1,060,321	-				+1.0
1,060,355	+				-0.2
1,060,355	+				+0.7
1,060,356	-				+0.4
1,060,356	-				-0.2
1,060,356	-				-0.4
1,060,356	-				+0.3
1,060,360	+				+0.7
1,060,360	+				-0.3
1,060,360	+				+0.0
1,060,406	+				-0.7
1,060,407	-				-0.3
1,060,407	-				-0.9
1,060,407	-				+0.0
1,060,483	+				-0.6
1,060,483	+				+0.5
1,060,483	+				-1.6
1,060,483	+				-1.1
1,060,484	-				+0.6
1,060,484	-				+0.5
1,060,494	+				-0.8
1,060,494	+				+0.3
1,060,495	-				-1.2
1,060,495	-				-0.2
1,060,518	+				-0.1
1,060,579	+				+0.4
1,060,579	+				+0.0
1,060,579	+				+0.5
1,060,579	+				-0.4
1,060,580	-				+0.9
1,060,580	-				+0.3
1,060,580	-				+0.4
1,060,647	+		AO356_04715	0.12	-0.2
1,060,648	-		AO356_04715	0.12	+0.1
1,060,721	+		AO356_04715	0.27	+0.2
1,060,721	+		AO356_04715	0.27	+0.7
1,060,722	-		AO356_04715	0.27	+0.3
1,060,729	+		AO356_04715	0.29	-0.1
1,060,729	+		AO356_04715	0.29	+0.6
1,060,730	-		AO356_04715	0.29	+0.3
1,061,173	+				-0.6
1,061,255	+				+0.4
1,061,255	+				+1.2
1,061,255	+				+0.4
1,061,255	+				+0.3
1,061,255	+				-0.8
1,061,255	+				+0.1
1,061,256	-				+0.3
1,061,256	-				+0.2
1,061,256	-				+0.5
1,061,256	-				-0.1
1,061,256	-				-0.4
1,061,256	-				+0.6
1,061,256	-				+0.7
1,061,256	-				-1.3
1,061,256	-				+0.0
1,061,256	-				+0.3
1,061,397	+		AO356_04720	0.29	-0.5
1,061,457	+		AO356_04720	0.39	-1.7
1,061,540	+		AO356_04720	0.52	+0.2
1,061,541	-		AO356_04720	0.52	-0.6
1,061,721	+		AO356_04720	0.81	+0.7
1,061,721	+		AO356_04720	0.81	-0.2
1,061,721	+		AO356_04720	0.81	+0.1
1,061,721	+		AO356_04720	0.81	+0.4
1,061,721	+		AO356_04720	0.81	+1.5
1,061,722	-		AO356_04720	0.81	-2.5
1,061,722	-		AO356_04720	0.81	-0.8
1,061,772	+		AO356_04720	0.89	+0.3
1,061,772	+		AO356_04720	0.89	+0.7
1,061,773	-		AO356_04720	0.89	-0.0
1,061,840	+				-0.4
1,061,840	+				+1.5
1,061,854	-				-0.5
1,061,991	+				+0.1
1,061,991	+				+0.0
1,061,991	+				-0.3
1,062,020	+		AO356_04725	0.16	+1.0
1,062,020	+		AO356_04725	0.16	-0.2
1,062,021	-		AO356_04725	0.16	+0.9
1,062,021	-		AO356_04725	0.16	-0.3
1,062,045	+		AO356_04725	0.23	+1.1
1,062,046	-		AO356_04725	0.23	+1.1
1,062,046	-		AO356_04725	0.23	+1.1
1,062,073	+		AO356_04725	0.30	-1.8
1,062,073	+		AO356_04725	0.30	-0.1
1,062,074	-		AO356_04725	0.31	-0.2
1,062,074	-		AO356_04725	0.31	-0.0
1,062,086	+		AO356_04725	0.34	-0.4
1,062,101	-		AO356_04725	0.38	-0.5
1,062,101	-		AO356_04725	0.38	+0.1
1,062,101	-		AO356_04725	0.38	-0.3
1,062,102	+		AO356_04725	0.38	+0.9
1,062,106	-		AO356_04725	0.39	-0.4
1,062,141	-		AO356_04725	0.49	-0.2
1,062,180	+		AO356_04725	0.60	+0.2
1,062,180	+		AO356_04725	0.60	+0.3
1,062,180	+		AO356_04725	0.60	+1.1
1,062,181	-		AO356_04725	0.60	+1.4
1,062,181	-		AO356_04725	0.60	-0.6
1,062,181	-		AO356_04725	0.60	-0.8
1,062,290	+				-1.9
1,062,290	+				+0.4
1,062,291	-				+3.6
1,062,291	-				-0.6
1,062,613	+		AO356_04730	0.64	-0.8
1,062,613	+		AO356_04730	0.64	-0.6
1,062,613	+		AO356_04730	0.64	+0.3
1,062,679	+		AO356_04730	0.80	-0.8
1,062,679	+		AO356_04730	0.80	-1.2
1,062,679	+		AO356_04730	0.80	-0.4
1,062,679	+		AO356_04730	0.80	+0.1
1,062,679	+		AO356_04730	0.80	+0.3
1,062,679	+		AO356_04730	0.80	+0.2
1,062,680	-		AO356_04730	0.80	-0.4
1,062,680	-		AO356_04730	0.80	-0.8
1,062,680	-		AO356_04730	0.80	-0.8
1,062,680	-		AO356_04730	0.80	+0.8
1,062,680	-		AO356_04730	0.80	-0.3
1,062,680	-		AO356_04730	0.80	+1.0
1,062,680	-		AO356_04730	0.80	+0.3
1,062,743	+				+0.7
1,062,743	+				+0.4
1,062,744	-				-2.1
1,062,744	-				+1.1
1,062,744	-				-1.6
1,062,798	+				-0.0
1,062,809	+				-2.6
1,062,809	+				-0.1
1,062,810	-				-1.1
1,062,810	-				+1.0
1,062,810	-				+0.4
1,062,826	+				+1.6
1,062,827	-				+0.6