Experiment: 1-ethyl-3-methylimidazolium acetate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01225 and AO356_01230 are separated by 169 nucleotides AO356_01230 and AO356_01235 are separated by 336 nucleotides
AO356_01225: AO356_01225 - alpha/beta hydrolase, at 280,786 to 281,724
_01225
AO356_01230: AO356_01230 - GntR family transcriptional regulator, at 281,894 to 282,607
_01230
AO356_01235: AO356_01235 - MFS transporter, at 282,944 to 284,293
_01235
Position (kb) 281
282
283 Strain fitness (log2 ratio) -1
0
1 at 281.059 kb on + strand, within AO356_01225 at 281.060 kb on - strand, within AO356_01225 at 281.060 kb on - strand, within AO356_01225 at 281.201 kb on - strand, within AO356_01225 at 281.201 kb on - strand, within AO356_01225 at 281.269 kb on + strand, within AO356_01225 at 281.269 kb on + strand, within AO356_01225 at 281.269 kb on + strand, within AO356_01225 at 281.269 kb on + strand, within AO356_01225 at 281.270 kb on - strand, within AO356_01225 at 281.418 kb on + strand, within AO356_01225 at 281.418 kb on + strand, within AO356_01225 at 281.419 kb on - strand, within AO356_01225 at 281.419 kb on - strand, within AO356_01225 at 281.419 kb on - strand, within AO356_01225 at 281.419 kb on - strand, within AO356_01225 at 281.524 kb on + strand, within AO356_01225 at 281.607 kb on + strand, within AO356_01225 at 281.607 kb on + strand, within AO356_01225 at 281.608 kb on - strand, within AO356_01225 at 281.608 kb on - strand, within AO356_01225 at 281.608 kb on - strand, within AO356_01225 at 281.608 kb on - strand, within AO356_01225 at 281.608 kb on - strand, within AO356_01225 at 281.736 kb on - strand at 281.736 kb on - strand at 281.736 kb on - strand at 282.032 kb on + strand, within AO356_01230 at 282.032 kb on + strand, within AO356_01230 at 282.032 kb on + strand, within AO356_01230 at 282.205 kb on - strand, within AO356_01230 at 282.571 kb on + strand at 282.572 kb on - strand at 283.058 kb on + strand at 283.058 kb on + strand at 283.059 kb on - strand at 283.059 kb on - strand at 283.059 kb on - strand at 283.059 kb on - strand at 283.131 kb on - strand, within AO356_01235 at 283.295 kb on + strand, within AO356_01235 at 283.295 kb on + strand, within AO356_01235 at 283.295 kb on + strand, within AO356_01235 at 283.296 kb on - strand, within AO356_01235 at 283.296 kb on - strand, within AO356_01235 at 283.352 kb on + strand, within AO356_01235 at 283.352 kb on + strand, within AO356_01235 at 283.353 kb on - strand, within AO356_01235 at 283.353 kb on - strand, within AO356_01235 at 283.355 kb on + strand, within AO356_01235 at 283.355 kb on + strand, within AO356_01235 at 283.505 kb on + strand, within AO356_01235 at 283.506 kb on - strand, within AO356_01235
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium acetate 5 mM remove 281,059 + AO356_01225 0.29 -0.5 281,060 - AO356_01225 0.29 -0.6 281,060 - AO356_01225 0.29 -0.1 281,201 - AO356_01225 0.44 +1.1 281,201 - AO356_01225 0.44 +1.7 281,269 + AO356_01225 0.51 -0.4 281,269 + AO356_01225 0.51 -1.2 281,269 + AO356_01225 0.51 +0.2 281,269 + AO356_01225 0.51 +0.5 281,270 - AO356_01225 0.52 +1.2 281,418 + AO356_01225 0.67 +0.1 281,418 + AO356_01225 0.67 -0.1 281,419 - AO356_01225 0.67 -0.2 281,419 - AO356_01225 0.67 +0.1 281,419 - AO356_01225 0.67 +0.8 281,419 - AO356_01225 0.67 -0.1 281,524 + AO356_01225 0.79 -0.1 281,607 + AO356_01225 0.87 -1.2 281,607 + AO356_01225 0.87 +0.4 281,608 - AO356_01225 0.88 +0.1 281,608 - AO356_01225 0.88 +0.2 281,608 - AO356_01225 0.88 -1.2 281,608 - AO356_01225 0.88 +1.3 281,608 - AO356_01225 0.88 -0.2 281,736 - -1.0 281,736 - +0.2 281,736 - +1.5 282,032 + AO356_01230 0.19 -1.0 282,032 + AO356_01230 0.19 -0.1 282,032 + AO356_01230 0.19 -0.7 282,205 - AO356_01230 0.44 -0.1 282,571 + -0.2 282,572 - -0.1 283,058 + -0.2 283,058 + +1.4 283,059 - -0.9 283,059 - +0.7 283,059 - +0.7 283,059 - +0.5 283,131 - AO356_01235 0.14 +1.3 283,295 + AO356_01235 0.26 +0.0 283,295 + AO356_01235 0.26 +0.2 283,295 + AO356_01235 0.26 +0.1 283,296 - AO356_01235 0.26 -0.1 283,296 - AO356_01235 0.26 -1.4 283,352 + AO356_01235 0.30 +1.3 283,352 + AO356_01235 0.30 -0.7 283,353 - AO356_01235 0.30 -0.0 283,353 - AO356_01235 0.30 +0.7 283,355 + AO356_01235 0.30 +0.2 283,355 + AO356_01235 0.30 -0.7 283,505 + AO356_01235 0.42 -0.4 283,506 - AO356_01235 0.42 -0.4
Or see this region's nucleotide sequence