Strain Fitness in Shewanella loihica PV-4 around Shew_2410
Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 5 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,828,702 | + | -0.1 | |||
| 2,828,744 | + | Shew_2409 | 0.12 | -0.2 | |
| 2,829,277 | - | Shew_2409 | 0.85 | -0.0 | |
| 2,829,419 | + | -0.1 | |||
| 2,830,534 | - | Shew_2410 | 0.79 | -2.8 | |
| 2,831,475 | + | Shew_2411 | 0.28 | +0.2 |
Or see this region's nucleotide sequence