Strain Fitness in Shewanella loihica PV-4 around Shew_2396
Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 5 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,810,373 | - | Shew_2395 | 0.80 | +0.1 | |
| 2,810,883 | - | +0.0 | |||
| 2,810,913 | + | -0.0 | |||
| 2,811,173 | + | -0.0 | |||
| 2,811,213 | + | Shew_2396 | 0.11 | -0.4 | |
| 2,811,228 | - | Shew_2396 | 0.17 | -0.3 | |
| 2,811,625 | + | Shew_2397 | 0.12 | -0.1 | |
| 2,812,165 | + | Shew_2397 | 0.71 | -0.1 | |
| 2,812,218 | - | Shew_2397 | 0.76 | +0.0 |
Or see this region's nucleotide sequence