Experiment: antimonate 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_855 and Pf6N2E2_856 are separated by 45 nucleotides Pf6N2E2_856 and Pf6N2E2_857 are separated by 296 nucleotides
Pf6N2E2_855 - Transcriptional regulator, IclR family, at 1,001,157 to 1,001,963
_855
Pf6N2E2_856 - Oxidoreductase, putative, at 1,002,009 to 1,003,016
_856
Pf6N2E2_857 - hypothetical protein, at 1,003,313 to 1,003,483
_857
Position (kb)
1002
1003
1004 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1001.069 kb on + strand at 1001.218 kb on - strand at 1001.347 kb on - strand, within Pf6N2E2_855 at 1001.548 kb on - strand, within Pf6N2E2_855 at 1001.548 kb on - strand, within Pf6N2E2_855 at 1001.819 kb on - strand, within Pf6N2E2_855 at 1002.151 kb on - strand, within Pf6N2E2_856 at 1002.164 kb on - strand, within Pf6N2E2_856 at 1002.167 kb on - strand, within Pf6N2E2_856 at 1002.167 kb on - strand, within Pf6N2E2_856 at 1002.167 kb on - strand, within Pf6N2E2_856 at 1002.167 kb on - strand, within Pf6N2E2_856 at 1002.167 kb on - strand, within Pf6N2E2_856 at 1002.167 kb on - strand, within Pf6N2E2_856 at 1002.167 kb on - strand, within Pf6N2E2_856 at 1002.167 kb on - strand, within Pf6N2E2_856 at 1002.167 kb on - strand, within Pf6N2E2_856 at 1002.254 kb on - strand, within Pf6N2E2_856 at 1002.254 kb on - strand, within Pf6N2E2_856 at 1002.254 kb on - strand, within Pf6N2E2_856 at 1002.254 kb on - strand, within Pf6N2E2_856 at 1002.284 kb on - strand, within Pf6N2E2_856 at 1002.433 kb on - strand, within Pf6N2E2_856 at 1002.547 kb on + strand, within Pf6N2E2_856 at 1002.636 kb on + strand, within Pf6N2E2_856 at 1002.637 kb on - strand, within Pf6N2E2_856 at 1002.712 kb on - strand, within Pf6N2E2_856 at 1002.712 kb on - strand, within Pf6N2E2_856 at 1002.865 kb on + strand, within Pf6N2E2_856 at 1002.865 kb on + strand, within Pf6N2E2_856 at 1002.866 kb on - strand, within Pf6N2E2_856 at 1002.970 kb on + strand at 1002.971 kb on - strand at 1002.971 kb on - strand at 1002.993 kb on + strand at 1002.994 kb on - strand at 1003.030 kb on - strand at 1003.030 kb on - strand at 1003.030 kb on - strand at 1003.039 kb on + strand at 1003.039 kb on + strand at 1003.039 kb on + strand at 1003.040 kb on - strand at 1003.040 kb on - strand at 1003.040 kb on - strand at 1003.040 kb on - strand at 1003.040 kb on - strand at 1003.040 kb on - strand at 1003.040 kb on - strand at 1003.088 kb on + strand at 1003.088 kb on + strand at 1003.088 kb on + strand at 1003.088 kb on + strand at 1003.089 kb on - strand at 1003.090 kb on + strand at 1003.090 kb on + strand at 1003.091 kb on - strand at 1003.123 kb on + strand at 1003.127 kb on - strand at 1003.296 kb on + strand at 1003.296 kb on + strand at 1003.296 kb on + strand at 1003.296 kb on + strand at 1003.297 kb on - strand at 1003.297 kb on - strand at 1003.297 kb on - strand at 1003.297 kb on - strand at 1003.297 kb on - strand at 1003.297 kb on - strand at 1003.304 kb on - strand at 1003.315 kb on - strand at 1003.315 kb on - strand at 1003.330 kb on - strand, within Pf6N2E2_857 at 1003.330 kb on - strand, within Pf6N2E2_857 at 1003.385 kb on + strand, within Pf6N2E2_857 at 1003.385 kb on + strand, within Pf6N2E2_857 at 1003.386 kb on - strand, within Pf6N2E2_857 at 1003.386 kb on - strand, within Pf6N2E2_857 at 1003.393 kb on + strand, within Pf6N2E2_857 at 1003.393 kb on + strand, within Pf6N2E2_857 at 1003.394 kb on - strand, within Pf6N2E2_857 at 1003.394 kb on - strand, within Pf6N2E2_857 at 1003.394 kb on - strand, within Pf6N2E2_857 at 1003.394 kb on - strand, within Pf6N2E2_857 at 1003.394 kb on - strand, within Pf6N2E2_857 at 1003.511 kb on + strand at 1003.512 kb on - strand at 1003.513 kb on + strand at 1003.513 kb on + strand at 1003.514 kb on - strand at 1003.596 kb on + strand at 1003.596 kb on + strand at 1003.597 kb on - strand at 1003.597 kb on - strand at 1003.597 kb on - strand at 1003.632 kb on - strand at 1003.632 kb on - strand at 1003.632 kb on - strand at 1003.736 kb on + strand at 1003.736 kb on + strand at 1003.739 kb on - strand at 1003.879 kb on + strand at 1003.880 kb on - strand at 1003.880 kb on - strand at 1004.000 kb on + strand at 1004.001 kb on - strand at 1004.001 kb on - strand at 1004.001 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction antimonate 0.005 M remove 1,001,069 + -0.2 1,001,218 - +1.5 1,001,347 - Pf6N2E2_855 0.24 -1.5 1,001,548 - Pf6N2E2_855 0.48 -0.1 1,001,548 - Pf6N2E2_855 0.48 -0.8 1,001,819 - Pf6N2E2_855 0.82 -1.8 1,002,151 - Pf6N2E2_856 0.14 +0.2 1,002,164 - Pf6N2E2_856 0.15 +0.3 1,002,167 - Pf6N2E2_856 0.16 -0.3 1,002,167 - Pf6N2E2_856 0.16 -0.1 1,002,167 - Pf6N2E2_856 0.16 -0.2 1,002,167 - Pf6N2E2_856 0.16 +0.8 1,002,167 - Pf6N2E2_856 0.16 +1.1 1,002,167 - Pf6N2E2_856 0.16 -1.1 1,002,167 - Pf6N2E2_856 0.16 +0.2 1,002,167 - Pf6N2E2_856 0.16 -2.3 1,002,167 - Pf6N2E2_856 0.16 +0.5 1,002,254 - Pf6N2E2_856 0.24 +1.8 1,002,254 - Pf6N2E2_856 0.24 +1.1 1,002,254 - Pf6N2E2_856 0.24 +0.5 1,002,254 - Pf6N2E2_856 0.24 +0.3 1,002,284 - Pf6N2E2_856 0.27 +0.2 1,002,433 - Pf6N2E2_856 0.42 +0.4 1,002,547 + Pf6N2E2_856 0.53 +0.8 1,002,636 + Pf6N2E2_856 0.62 +0.8 1,002,637 - Pf6N2E2_856 0.62 -1.0 1,002,712 - Pf6N2E2_856 0.70 +1.5 1,002,712 - Pf6N2E2_856 0.70 +0.9 1,002,865 + Pf6N2E2_856 0.85 -1.3 1,002,865 + Pf6N2E2_856 0.85 -0.2 1,002,866 - Pf6N2E2_856 0.85 +1.5 1,002,970 + +0.1 1,002,971 - -1.7 1,002,971 - +0.5 1,002,993 + +0.3 1,002,994 - +0.2 1,003,030 - +1.2 1,003,030 - +0.7 1,003,030 - +1.0 1,003,039 + -0.6 1,003,039 + +0.4 1,003,039 + +1.3 1,003,040 - -2.0 1,003,040 - +1.3 1,003,040 - -0.6 1,003,040 - +0.5 1,003,040 - +0.1 1,003,040 - -0.5 1,003,040 - +0.7 1,003,088 + +1.2 1,003,088 + -1.3 1,003,088 + -1.1 1,003,088 + +0.9 1,003,089 - -0.1 1,003,090 + +0.1 1,003,090 + +0.8 1,003,091 - -0.6 1,003,123 + +0.5 1,003,127 - +0.7 1,003,296 + +1.5 1,003,296 + +0.3 1,003,296 + +0.5 1,003,296 + -0.5 1,003,297 - +0.0 1,003,297 - +0.0 1,003,297 - -0.3 1,003,297 - +0.2 1,003,297 - +1.0 1,003,297 - +0.3 1,003,304 - -0.6 1,003,315 - +0.6 1,003,315 - +0.4 1,003,330 - Pf6N2E2_857 0.10 +0.7 1,003,330 - Pf6N2E2_857 0.10 +1.5 1,003,385 + Pf6N2E2_857 0.42 +0.8 1,003,385 + Pf6N2E2_857 0.42 -1.0 1,003,386 - Pf6N2E2_857 0.43 -0.5 1,003,386 - Pf6N2E2_857 0.43 +0.9 1,003,393 + Pf6N2E2_857 0.47 +0.5 1,003,393 + Pf6N2E2_857 0.47 -0.4 1,003,394 - Pf6N2E2_857 0.47 +0.2 1,003,394 - Pf6N2E2_857 0.47 +1.9 1,003,394 - Pf6N2E2_857 0.47 +0.2 1,003,394 - Pf6N2E2_857 0.47 -1.0 1,003,394 - Pf6N2E2_857 0.47 -0.3 1,003,511 + -0.7 1,003,512 - +1.7 1,003,513 + -0.2 1,003,513 + -0.8 1,003,514 - +0.5 1,003,596 + -0.1 1,003,596 + -0.5 1,003,597 - +0.4 1,003,597 - +1.6 1,003,597 - -0.4 1,003,632 - +0.1 1,003,632 - +0.3 1,003,632 - +0.1 1,003,736 + +0.1 1,003,736 + +0.7 1,003,739 - -0.3 1,003,879 + +1.0 1,003,880 - -0.3 1,003,880 - +1.0 1,004,000 + -0.1 1,004,001 - -0.3 1,004,001 - -0.2 1,004,001 - -0.6
Or see this region's nucleotide sequence