Experiment: antimonate 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3944 and Pf6N2E2_3945 are separated by 68 nucleotides Pf6N2E2_3945 and Pf6N2E2_3946 are separated by 49 nucleotides Pf6N2E2_3946 and Pf6N2E2_3947 are separated by 115 nucleotides Pf6N2E2_3947 and Pf6N2E2_3948 are separated by 86 nucleotides
Pf6N2E2_3944 - Protein of unknown function DUF81, at 4,581,868 to 4,582,668
_3944
Pf6N2E2_3945 - Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-), at 4,582,737 to 4,583,546
_3945
Pf6N2E2_3946 - Thymidylate synthase (EC 2.1.1.45), at 4,583,596 to 4,584,567
_3946
Pf6N2E2_3947 - Cd(II)/Pb(II)-responsive transcriptional regulator, at 4,584,683 to 4,585,129
_3947
Pf6N2E2_3948 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 4,585,216 to 4,587,435
_3948
Position (kb)
4583
4584
4585 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4582.637 kb on + strand at 4582.637 kb on + strand at 4582.637 kb on + strand at 4582.637 kb on + strand at 4582.637 kb on + strand at 4582.682 kb on + strand at 4582.723 kb on + strand at 4583.511 kb on + strand at 4583.511 kb on + strand at 4585.024 kb on - strand, within Pf6N2E2_3947 at 4585.071 kb on + strand, within Pf6N2E2_3947 at 4585.074 kb on + strand, within Pf6N2E2_3947 at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.180 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction antimonate 0.005 M remove 4,582,637 + +0.6 4,582,637 + -0.2 4,582,637 + +0.4 4,582,637 + +1.4 4,582,637 + +0.8 4,582,682 + +0.4 4,582,723 + +0.2 4,583,511 + -0.1 4,583,511 + +0.6 4,585,024 - Pf6N2E2_3947 0.76 +0.1 4,585,071 + Pf6N2E2_3947 0.87 +0.5 4,585,074 + Pf6N2E2_3947 0.87 +1.2 4,585,146 + -1.4 4,585,146 + -1.4 4,585,146 + +0.0 4,585,146 + -1.1 4,585,146 + +0.2 4,585,146 + +0.2 4,585,147 - +0.8 4,585,147 - -0.3 4,585,147 - -0.3 4,585,147 - -1.2 4,585,147 - -1.8 4,585,147 - +0.0 4,585,147 - -3.0 4,585,147 - +0.9 4,585,180 + -0.4
Or see this region's nucleotide sequence