Experiment: antimonate 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3705 and Pf6N2E2_3706 are separated by 27 nucleotides Pf6N2E2_3706 and Pf6N2E2_3707 are separated by 37 nucleotides Pf6N2E2_3707 and Pf6N2E2_3708 are separated by 335 nucleotides
Pf6N2E2_3705 - Putative sugar transporter, at 4,319,093 to 4,320,433
_3705
Pf6N2E2_3706 - Putative polysaccharide deacetylase, at 4,320,461 to 4,321,342
_3706
Pf6N2E2_3707 - Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases, at 4,321,380 to 4,322,753
_3707
Pf6N2E2_3708 - predicted biotin regulatory protein BioR (GntR family), at 4,323,089 to 4,324,090
_3708
Position (kb)
4321
4322
4323 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4320.423 kb on + strand at 4320.424 kb on - strand at 4320.450 kb on + strand at 4320.450 kb on + strand at 4320.451 kb on - strand at 4320.451 kb on - strand at 4320.451 kb on - strand at 4320.642 kb on + strand, within Pf6N2E2_3706 at 4320.753 kb on + strand, within Pf6N2E2_3706 at 4320.834 kb on + strand, within Pf6N2E2_3706 at 4320.870 kb on + strand, within Pf6N2E2_3706 at 4320.870 kb on + strand, within Pf6N2E2_3706 at 4320.870 kb on + strand, within Pf6N2E2_3706 at 4320.870 kb on + strand, within Pf6N2E2_3706 at 4320.870 kb on + strand, within Pf6N2E2_3706 at 4320.870 kb on + strand, within Pf6N2E2_3706 at 4320.870 kb on + strand, within Pf6N2E2_3706 at 4320.871 kb on - strand, within Pf6N2E2_3706 at 4320.871 kb on - strand, within Pf6N2E2_3706 at 4320.871 kb on - strand, within Pf6N2E2_3706 at 4320.871 kb on - strand, within Pf6N2E2_3706 at 4320.871 kb on - strand, within Pf6N2E2_3706 at 4320.871 kb on - strand, within Pf6N2E2_3706 at 4320.871 kb on - strand, within Pf6N2E2_3706 at 4320.871 kb on - strand, within Pf6N2E2_3706 at 4320.871 kb on - strand, within Pf6N2E2_3706 at 4320.873 kb on + strand, within Pf6N2E2_3706 at 4320.873 kb on + strand, within Pf6N2E2_3706 at 4320.874 kb on - strand, within Pf6N2E2_3706 at 4320.874 kb on - strand, within Pf6N2E2_3706 at 4320.874 kb on - strand, within Pf6N2E2_3706 at 4320.909 kb on + strand, within Pf6N2E2_3706 at 4320.909 kb on + strand, within Pf6N2E2_3706 at 4320.910 kb on - strand, within Pf6N2E2_3706 at 4321.024 kb on + strand, within Pf6N2E2_3706 at 4321.078 kb on + strand, within Pf6N2E2_3706 at 4321.078 kb on + strand, within Pf6N2E2_3706 at 4321.078 kb on + strand, within Pf6N2E2_3706 at 4321.079 kb on - strand, within Pf6N2E2_3706 at 4321.079 kb on - strand, within Pf6N2E2_3706 at 4321.250 kb on - strand, within Pf6N2E2_3706 at 4321.250 kb on - strand, within Pf6N2E2_3706 at 4321.305 kb on - strand at 4321.331 kb on - strand at 4321.331 kb on - strand at 4321.370 kb on + strand at 4321.371 kb on - strand at 4321.371 kb on - strand at 4322.766 kb on - strand at 4322.772 kb on + strand at 4322.813 kb on + strand at 4322.814 kb on - strand at 4322.831 kb on - strand at 4322.831 kb on - strand at 4322.831 kb on - strand at 4322.868 kb on - strand at 4322.868 kb on - strand at 4322.936 kb on - strand at 4322.939 kb on + strand at 4322.939 kb on + strand at 4322.939 kb on + strand at 4322.940 kb on - strand at 4322.940 kb on - strand at 4322.940 kb on - strand at 4322.944 kb on + strand at 4322.944 kb on + strand at 4322.944 kb on + strand at 4322.944 kb on + strand at 4322.945 kb on - strand at 4322.945 kb on - strand at 4322.945 kb on - strand at 4322.945 kb on - strand at 4322.962 kb on - strand at 4322.967 kb on + strand at 4323.150 kb on + strand at 4323.150 kb on + strand at 4323.150 kb on + strand at 4323.150 kb on + strand at 4323.150 kb on + strand at 4323.151 kb on - strand at 4323.195 kb on + strand, within Pf6N2E2_3708 at 4323.195 kb on + strand, within Pf6N2E2_3708 at 4323.195 kb on + strand, within Pf6N2E2_3708 at 4323.195 kb on + strand, within Pf6N2E2_3708 at 4323.196 kb on - strand, within Pf6N2E2_3708 at 4323.196 kb on - strand, within Pf6N2E2_3708 at 4323.198 kb on + strand, within Pf6N2E2_3708 at 4323.198 kb on + strand, within Pf6N2E2_3708 at 4323.198 kb on + strand, within Pf6N2E2_3708 at 4323.198 kb on + strand, within Pf6N2E2_3708 at 4323.308 kb on + strand, within Pf6N2E2_3708 at 4323.463 kb on + strand, within Pf6N2E2_3708 at 4323.463 kb on + strand, within Pf6N2E2_3708 at 4323.463 kb on + strand, within Pf6N2E2_3708 at 4323.464 kb on - strand, within Pf6N2E2_3708 at 4323.464 kb on - strand, within Pf6N2E2_3708 at 4323.464 kb on - strand, within Pf6N2E2_3708 at 4323.510 kb on - strand, within Pf6N2E2_3708 at 4323.636 kb on - strand, within Pf6N2E2_3708
Per-strain Table
Position Strand Gene LocusTag Fraction antimonate 0.005 M remove 4,320,423 + +0.5 4,320,424 - +0.1 4,320,450 + -0.1 4,320,450 + -0.1 4,320,451 - +0.9 4,320,451 - +0.6 4,320,451 - -1.5 4,320,642 + Pf6N2E2_3706 0.21 -1.5 4,320,753 + Pf6N2E2_3706 0.33 +0.2 4,320,834 + Pf6N2E2_3706 0.42 -0.5 4,320,870 + Pf6N2E2_3706 0.46 -0.0 4,320,870 + Pf6N2E2_3706 0.46 +1.8 4,320,870 + Pf6N2E2_3706 0.46 -2.4 4,320,870 + Pf6N2E2_3706 0.46 +1.2 4,320,870 + Pf6N2E2_3706 0.46 +2.5 4,320,870 + Pf6N2E2_3706 0.46 +0.1 4,320,870 + Pf6N2E2_3706 0.46 -0.1 4,320,871 - Pf6N2E2_3706 0.46 +0.5 4,320,871 - Pf6N2E2_3706 0.46 -0.9 4,320,871 - Pf6N2E2_3706 0.46 -1.9 4,320,871 - Pf6N2E2_3706 0.46 +0.3 4,320,871 - Pf6N2E2_3706 0.46 +1.5 4,320,871 - Pf6N2E2_3706 0.46 +0.6 4,320,871 - Pf6N2E2_3706 0.46 +0.8 4,320,871 - Pf6N2E2_3706 0.46 -1.4 4,320,871 - Pf6N2E2_3706 0.46 +0.1 4,320,873 + Pf6N2E2_3706 0.47 +1.7 4,320,873 + Pf6N2E2_3706 0.47 +0.5 4,320,874 - Pf6N2E2_3706 0.47 +0.1 4,320,874 - Pf6N2E2_3706 0.47 -0.2 4,320,874 - Pf6N2E2_3706 0.47 +0.3 4,320,909 + Pf6N2E2_3706 0.51 +0.3 4,320,909 + Pf6N2E2_3706 0.51 -0.3 4,320,910 - Pf6N2E2_3706 0.51 +0.5 4,321,024 + Pf6N2E2_3706 0.64 -2.2 4,321,078 + Pf6N2E2_3706 0.70 +0.1 4,321,078 + Pf6N2E2_3706 0.70 +0.6 4,321,078 + Pf6N2E2_3706 0.70 -0.5 4,321,079 - Pf6N2E2_3706 0.70 -1.4 4,321,079 - Pf6N2E2_3706 0.70 -1.4 4,321,250 - Pf6N2E2_3706 0.89 +0.4 4,321,250 - Pf6N2E2_3706 0.89 -0.3 4,321,305 - +0.7 4,321,331 - -1.2 4,321,331 - +0.4 4,321,370 + +0.2 4,321,371 - +0.6 4,321,371 - -0.5 4,322,766 - +2.7 4,322,772 + -0.2 4,322,813 + -0.2 4,322,814 - -0.6 4,322,831 - -0.2 4,322,831 - +0.4 4,322,831 - +0.2 4,322,868 - -1.3 4,322,868 - +0.9 4,322,936 - +0.0 4,322,939 + -0.1 4,322,939 + +0.1 4,322,939 + +0.1 4,322,940 - +1.1 4,322,940 - +0.3 4,322,940 - -0.0 4,322,944 + +0.1 4,322,944 + +1.0 4,322,944 + +0.7 4,322,944 + +0.7 4,322,945 - -0.2 4,322,945 - -0.3 4,322,945 - -0.4 4,322,945 - -0.3 4,322,962 - -0.8 4,322,967 + -1.4 4,323,150 + -0.7 4,323,150 + -0.9 4,323,150 + -0.5 4,323,150 + -0.6 4,323,150 + +0.9 4,323,151 - -0.5 4,323,195 + Pf6N2E2_3708 0.11 -0.5 4,323,195 + Pf6N2E2_3708 0.11 +0.0 4,323,195 + Pf6N2E2_3708 0.11 -0.4 4,323,195 + Pf6N2E2_3708 0.11 +0.9 4,323,196 - Pf6N2E2_3708 0.11 +0.1 4,323,196 - Pf6N2E2_3708 0.11 -0.4 4,323,198 + Pf6N2E2_3708 0.11 +1.1 4,323,198 + Pf6N2E2_3708 0.11 +0.8 4,323,198 + Pf6N2E2_3708 0.11 +0.3 4,323,198 + Pf6N2E2_3708 0.11 +0.6 4,323,308 + Pf6N2E2_3708 0.22 -0.0 4,323,463 + Pf6N2E2_3708 0.37 +3.6 4,323,463 + Pf6N2E2_3708 0.37 +1.2 4,323,463 + Pf6N2E2_3708 0.37 -1.0 4,323,464 - Pf6N2E2_3708 0.37 -0.9 4,323,464 - Pf6N2E2_3708 0.37 +0.1 4,323,464 - Pf6N2E2_3708 0.37 +2.0 4,323,510 - Pf6N2E2_3708 0.42 -0.2 4,323,636 - Pf6N2E2_3708 0.55 +0.3
Or see this region's nucleotide sequence