Experiment: D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4012 and Ga0059261_4013 are separated by 102 nucleotides Ga0059261_4013 and Ga0059261_4014 are separated by 105 nucleotides Ga0059261_4014 and Ga0059261_4015 are separated by 108 nucleotides
Ga0059261_4012: Ga0059261_4012 - AMP nucleosidase, at 4,127,325 to 4,128,776
_4012
Ga0059261_4013: Ga0059261_4013 - hypothetical protein, at 4,128,879 to 4,129,118
_4013
Ga0059261_4014: Ga0059261_4014 - Peroxiredoxin, at 4,129,224 to 4,129,703
_4014
Ga0059261_4015: Ga0059261_4015 - Putative transcriptional regulator, at 4,129,812 to 4,130,372
_4015
Position (kb) 4128
4129
4130 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4128.172 kb on + strand at 4128.173 kb on - strand, within Ga0059261_4012 at 4128.186 kb on + strand at 4128.186 kb on + strand at 4128.187 kb on - strand at 4128.421 kb on + strand, within Ga0059261_4012 at 4128.421 kb on + strand, within Ga0059261_4012 at 4128.422 kb on - strand at 4128.472 kb on + strand, within Ga0059261_4012 at 4128.473 kb on - strand, within Ga0059261_4012 at 4128.473 kb on - strand, within Ga0059261_4012 at 4128.509 kb on - strand, within Ga0059261_4012 at 4128.698 kb on + strand at 4128.698 kb on + strand at 4128.698 kb on + strand at 4128.733 kb on + strand at 4128.788 kb on - strand at 4128.870 kb on + strand at 4128.870 kb on + strand at 4128.880 kb on + strand at 4128.880 kb on + strand at 4128.881 kb on - strand at 4128.919 kb on + strand, within Ga0059261_4013 at 4128.920 kb on - strand, within Ga0059261_4013 at 4128.920 kb on - strand, within Ga0059261_4013 at 4129.243 kb on + strand at 4129.244 kb on - strand at 4129.664 kb on - strand at 4129.798 kb on + strand at 4129.799 kb on - strand at 4129.799 kb on - strand at 4129.812 kb on - strand at 4129.812 kb on - strand at 4129.827 kb on + strand at 4129.827 kb on + strand at 4129.827 kb on + strand at 4129.828 kb on - strand at 4129.828 kb on - strand at 4129.828 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.064 mg/ml remove 4,128,172 + -2.0 4,128,173 - Ga0059261_4012 0.58 +2.2 4,128,186 + -1.0 4,128,186 + +0.2 4,128,187 - -1.0 4,128,421 + Ga0059261_4012 0.75 -1.7 4,128,421 + Ga0059261_4012 0.75 +0.6 4,128,422 - +0.6 4,128,472 + Ga0059261_4012 0.79 -0.1 4,128,473 - Ga0059261_4012 0.79 -2.4 4,128,473 - Ga0059261_4012 0.79 +0.2 4,128,509 - Ga0059261_4012 0.82 -2.0 4,128,698 + -0.2 4,128,698 + +0.6 4,128,698 + -2.4 4,128,733 + -1.0 4,128,788 - +0.2 4,128,870 + +1.6 4,128,870 + -0.6 4,128,880 + +0.3 4,128,880 + +0.4 4,128,881 - +0.4 4,128,919 + Ga0059261_4013 0.17 +0.0 4,128,920 - Ga0059261_4013 0.17 +0.4 4,128,920 - Ga0059261_4013 0.17 +0.3 4,129,243 + -0.1 4,129,244 - -0.1 4,129,664 - -0.1 4,129,798 + +0.2 4,129,799 - +0.0 4,129,799 - -0.5 4,129,812 - -0.1 4,129,812 - -0.2 4,129,827 + -0.6 4,129,827 + +0.1 4,129,827 + -1.0 4,129,828 - +0.5 4,129,828 - +0.4 4,129,828 - -0.1
Or see this region's nucleotide sequence