Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2964

Experiment: D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.064 mg/ml
3,078,454	+		Ga0059261_2963	0.30	-0.5
3,078,454	+		Ga0059261_2963	0.30	+0.9
3,078,454	+		Ga0059261_2963	0.30	+0.6
3,078,454	+		Ga0059261_2963	0.30	-1.6
3,078,454	+		Ga0059261_2963	0.30	-0.2
3,078,454	+		Ga0059261_2963	0.30	+0.4
3,078,454	+		Ga0059261_2963	0.30	-0.6
3,078,454	+		Ga0059261_2963	0.30	+0.3
3,078,455	+		Ga0059261_2963	0.30	-1.1
3,078,455	-		Ga0059261_2963	0.30	+0.1
3,078,455	-		Ga0059261_2963	0.30	+0.4
3,078,455	-		Ga0059261_2963	0.30	+0.0
3,078,455	-		Ga0059261_2963	0.30	-0.4
3,078,455	-		Ga0059261_2963	0.30	-1.0
3,078,455	-		Ga0059261_2963	0.30	+0.1
3,078,455	-				+1.6
3,078,455	-		Ga0059261_2963	0.30	+0.8
3,078,457	+		Ga0059261_2963	0.30	+0.1
3,078,457	+		Ga0059261_2963	0.30	+0.3
3,078,457	+		Ga0059261_2963	0.30	-0.7
3,078,457	+		Ga0059261_2963	0.30	+0.6
3,078,457	+		Ga0059261_2963	0.30	-0.8
3,078,457	+		Ga0059261_2963	0.30	+0.4
3,078,457	+				+0.1
3,078,457	+		Ga0059261_2963	0.30	+0.3
3,078,457	+		Ga0059261_2963	0.30	-0.5
3,078,457	+		Ga0059261_2963	0.30	+0.3
3,078,457	+		Ga0059261_2963	0.30	-1.3
3,078,457	+		Ga0059261_2963	0.30	+0.2
3,078,457	+		Ga0059261_2963	0.30	+0.2
3,078,457	+		Ga0059261_2963	0.30	-1.5
3,078,457	+		Ga0059261_2963	0.30	+0.1
3,078,458	-		Ga0059261_2963	0.31	-0.5
3,078,458	-		Ga0059261_2963	0.31	+0.6
3,078,458	-		Ga0059261_2963	0.31	+0.4
3,078,458	-		Ga0059261_2963	0.31	-0.4
3,078,458	-		Ga0059261_2963	0.31	-0.1
3,078,458	-		Ga0059261_2963	0.31	-0.7
3,078,458	-		Ga0059261_2963	0.31	-0.4
3,078,458	-		Ga0059261_2963	0.31	+0.2
3,078,458	-		Ga0059261_2963	0.31	-1.1
3,078,458	-		Ga0059261_2963	0.31	+0.5
3,078,458	-		Ga0059261_2963	0.31	-0.4
3,078,458	-		Ga0059261_2963	0.31	-0.5
3,078,458	-		Ga0059261_2963	0.31	-0.4
3,078,463	+		Ga0059261_2963	0.31	+0.2
3,078,463	+		Ga0059261_2963	0.31	-0.5
3,078,463	+		Ga0059261_2963	0.31	-0.6
3,078,463	+		Ga0059261_2963	0.31	-0.5
3,078,464	-		Ga0059261_2963	0.31	-1.3
3,078,464	-		Ga0059261_2963	0.31	-0.4
3,078,464	-		Ga0059261_2963	0.31	-0.6
3,078,523	+		Ga0059261_2963	0.35	-0.3
3,078,523	+		Ga0059261_2963	0.35	-0.4
3,078,523	+		Ga0059261_2963	0.35	-0.4
3,078,523	+		Ga0059261_2963	0.35	-0.3
3,078,524	-		Ga0059261_2963	0.35	+0.2
3,078,524	-		Ga0059261_2963	0.35	+0.2
3,078,601	+		Ga0059261_2963	0.41	-0.1
3,078,602	-		Ga0059261_2963	0.41	-0.5
3,078,602	-		Ga0059261_2963	0.41	-0.2
3,078,602	-		Ga0059261_2963	0.41	+1.0
3,078,602	-		Ga0059261_2963	0.41	+0.9
3,078,661	+		Ga0059261_2963	0.45	+0.2
3,078,661	+		Ga0059261_2963	0.45	+0.2
3,078,661	+		Ga0059261_2963	0.45	+0.1
3,078,661	+		Ga0059261_2963	0.45	+0.3
3,078,662	-		Ga0059261_2963	0.45	+0.6
3,078,673	+		Ga0059261_2963	0.46	-0.6
3,078,673	+		Ga0059261_2963	0.46	+0.3
3,078,673	+		Ga0059261_2963	0.46	-0.9
3,078,673	+		Ga0059261_2963	0.46	-0.5
3,078,674	-		Ga0059261_2963	0.46	+0.1
3,078,674	-		Ga0059261_2963	0.46	-0.2
3,078,674	-		Ga0059261_2963	0.46	-1.2
3,078,688	+		Ga0059261_2963	0.47	-0.7
3,078,688	+		Ga0059261_2963	0.47	-0.6
3,078,688	+		Ga0059261_2963	0.47	-0.1
3,078,688	+		Ga0059261_2963	0.47	-0.3
3,078,688	+		Ga0059261_2963	0.47	+0.4
3,078,689	-		Ga0059261_2963	0.47	+1.0
3,078,928	+		Ga0059261_2963	0.65	+0.1
3,078,929	-		Ga0059261_2963	0.65	-0.6
3,078,929	-		Ga0059261_2963	0.65	-0.6
3,078,929	-		Ga0059261_2963	0.65	+0.3
3,078,946	+				+0.6
3,078,946	+		Ga0059261_2963	0.66	-0.2
3,078,946	+		Ga0059261_2963	0.66	-0.4
3,078,946	+		Ga0059261_2963	0.66	-0.0
3,078,946	+		Ga0059261_2963	0.66	-0.9
3,078,946	+		Ga0059261_2963	0.66	+0.5
3,078,946	+		Ga0059261_2963	0.66	+0.4
3,078,946	+				+2.0
3,078,946	+		Ga0059261_2963	0.66	-1.4
3,078,947	-		Ga0059261_2963	0.66	+0.1
3,078,947	-		Ga0059261_2963	0.66	-0.8
3,078,947	-		Ga0059261_2963	0.66	-0.2
3,078,947	-				+1.2
3,078,947	-		Ga0059261_2963	0.66	-0.6
3,078,947	-		Ga0059261_2963	0.66	-0.5
3,078,947	-		Ga0059261_2963	0.66	+0.9
3,078,947	-		Ga0059261_2963	0.66	-1.5
3,078,947	-		Ga0059261_2963	0.66	-0.5
3,078,947	-		Ga0059261_2963	0.66	-0.2
3,078,947	-		Ga0059261_2963	0.66	-0.1
3,078,947	-		Ga0059261_2963	0.66	-1.2
3,078,955	+		Ga0059261_2963	0.67	+1.9
3,078,955	+		Ga0059261_2963	0.67	-0.2
3,078,955	+		Ga0059261_2963	0.67	-0.2
3,078,955	+		Ga0059261_2963	0.67	+1.2
3,078,970	+		Ga0059261_2963	0.68	-0.1
3,078,970	+		Ga0059261_2963	0.68	-0.4
3,078,970	+		Ga0059261_2963	0.68	-0.3
3,078,970	+		Ga0059261_2963	0.68	-0.2
3,078,970	+		Ga0059261_2963	0.68	-0.1
3,078,971	-		Ga0059261_2963	0.68	-0.4
3,078,971	-		Ga0059261_2963	0.68	+0.6
3,078,971	-		Ga0059261_2963	0.68	+1.5
3,078,971	-		Ga0059261_2963	0.68	+1.1
3,078,971	-		Ga0059261_2963	0.68	+0.2
3,078,971	-		Ga0059261_2963	0.68	-1.9
3,079,163	-		Ga0059261_2963	0.82	+0.2
3,079,163	-				+0.1
3,079,178	+		Ga0059261_2963	0.83	+0.0
3,079,195	+		Ga0059261_2963	0.84	-0.4
3,079,195	+		Ga0059261_2963	0.84	+0.0
3,079,195	+		Ga0059261_2963	0.84	+0.6
3,079,195	+		Ga0059261_2963	0.84	+0.1
3,079,195	+		Ga0059261_2963	0.84	-0.4
3,079,195	+		Ga0059261_2963	0.84	-0.0
3,079,196	-		Ga0059261_2963	0.84	-0.8
3,079,196	-		Ga0059261_2963	0.84	+0.1
3,079,196	-		Ga0059261_2963	0.84	-0.8
3,079,196	-		Ga0059261_2963	0.84	-0.5
3,079,196	-				-0.4
3,079,196	-		Ga0059261_2963	0.84	+0.4
3,079,196	-		Ga0059261_2963	0.84	+0.5
3,079,196	-		Ga0059261_2963	0.84	+1.6
3,079,273	+		Ga0059261_2963	0.90	-0.3
3,079,273	+		Ga0059261_2963	0.90	+0.4
3,079,273	+		Ga0059261_2963	0.90	+0.6
3,079,274	-		Ga0059261_2963	0.90	+0.6
3,079,279	+				-1.9
3,079,279	+				-0.6
3,079,279	+				+1.6
3,079,279	+				-0.5
3,079,279	+				+0.0
3,079,279	+				-0.5
3,079,279	+				-0.3
3,079,279	+				-0.1
3,079,279	+				-0.8
3,079,279	+				-0.0
3,079,279	+				-0.3
3,079,279	+				-0.3
3,079,279	+				+0.6
3,079,280	-				+0.3
3,079,280	-				-0.4
3,079,280	-				+0.1
3,079,280	-				-0.6
3,079,280	-				+1.2
3,079,280	-				+1.6
3,079,280	-				+0.1
3,079,280	-				-0.7
3,079,280	-				-0.3
3,079,280	-				-0.1
3,079,280	-				+0.6
3,079,342	+				+0.2
3,079,342	+				+0.4
3,079,342	+				-0.6
3,079,343	-				-0.1
3,079,343	-				-0.0
3,079,343	-				+0.2
3,079,343	-				+0.4
3,079,343	-				-0.2
3,079,366	+				-0.6
3,079,366	+				-0.4
3,079,366	+				+0.5
3,079,366	+				-0.2
3,079,366	+				-0.3
3,079,366	+				-0.4
3,079,366	+				+0.4
3,079,367	-				-0.6
3,079,367	-				-0.1
3,079,368	+				+0.1
3,079,368	+				-0.0
3,079,368	+				-0.1
3,079,368	+				+0.1
3,079,368	+				+0.3
3,079,368	+				-0.0
3,079,369	-				+0.6
3,079,369	-				+0.6
3,079,369	-				+0.6
3,079,369	-				+0.5
3,079,414	+				+1.3
3,079,415	-				-0.5
3,079,415	-				+0.1
3,079,415	-				-0.4
3,079,415	-				-0.9
3,079,424	-				-0.3
3,079,424	-				-0.3
3,079,424	-				+1.0
3,079,433	+				-0.2
3,079,434	-				-0.6
3,079,434	-				+0.0
3,079,434	-				+0.3
3,079,434	-				+0.4
3,079,434	-				-0.3
3,079,451	+				-0.3
3,079,451	+				-0.1
3,079,451	+				-2.5
3,079,451	+				-0.9
3,079,451	+				-0.1
3,079,452	-				+0.0
3,079,452	-				-0.2
3,079,452	-				+0.1
3,079,452	-				+0.1
3,079,452	-				-0.1
3,079,452	-				-0.5
3,079,452	-				+0.2
3,079,452	-				-0.8
3,079,452	-				+0.3
3,079,452	-				-0.1
3,079,548	+				+0.1
3,079,548	+				-0.3
3,079,549	-				-0.1
3,079,549	-				-0.1
3,079,713	+		Ga0059261_2964	0.18	+0.2
3,079,713	+		Ga0059261_2964	0.18	-0.0
3,079,713	+		Ga0059261_2964	0.18	+0.2
3,079,714	-		Ga0059261_2964	0.18	+0.2
3,079,714	-		Ga0059261_2964	0.18	+0.1
3,079,763	+		Ga0059261_2964	0.21	+1.1
3,079,763	+		Ga0059261_2964	0.21	-0.4
3,079,763	+		Ga0059261_2964	0.21	+0.6
3,079,763	+		Ga0059261_2964	0.21	+0.6
3,079,763	+		Ga0059261_2964	0.21	-0.1
3,079,764	-		Ga0059261_2964	0.21	+0.1
3,079,764	-		Ga0059261_2964	0.21	+0.3
3,079,850	+		Ga0059261_2964	0.27	-0.1
3,079,851	-		Ga0059261_2964	0.27	-1.3
3,079,893	-		Ga0059261_2964	0.30	-0.4
3,080,121	+		Ga0059261_2964	0.45	-0.8
3,080,121	+		Ga0059261_2964	0.45	+0.4
3,080,121	+		Ga0059261_2964	0.45	-0.2
3,080,121	+		Ga0059261_2964	0.45	+0.2
3,080,121	+		Ga0059261_2964	0.45	-1.2
3,080,122	-		Ga0059261_2964	0.45	+0.4
3,080,122	-		Ga0059261_2964	0.45	+0.2
3,080,122	-		Ga0059261_2964	0.45	+1.1
3,080,122	-		Ga0059261_2964	0.45	-0.1
3,080,122	-		Ga0059261_2964	0.45	+0.1
3,080,122	-		Ga0059261_2964	0.45	+0.6
3,080,122	-		Ga0059261_2964	0.45	+0.6
3,080,123	+		Ga0059261_2964	0.45	+0.6
3,080,123	+		Ga0059261_2964	0.45	-0.1
3,080,123	+		Ga0059261_2964	0.45	+0.0
3,080,123	+		Ga0059261_2964	0.45	+1.6
3,080,123	+		Ga0059261_2964	0.45	+0.4
3,080,123	+		Ga0059261_2964	0.45	-0.0
3,080,123	+		Ga0059261_2964	0.45	-0.1
3,080,123	+		Ga0059261_2964	0.45	-0.2
3,080,123	+		Ga0059261_2964	0.45	+0.8
3,080,123	+		Ga0059261_2964	0.45	+0.8
3,080,124	-		Ga0059261_2964	0.45	-0.3
3,080,124	-		Ga0059261_2964	0.45	-0.9
3,080,124	-		Ga0059261_2964	0.45	+1.1
3,080,124	-		Ga0059261_2964	0.45	+1.1
3,080,124	-		Ga0059261_2964	0.45	+0.4
3,080,124	-		Ga0059261_2964	0.45	-0.7
3,080,124	-		Ga0059261_2964	0.45	+0.1
3,080,124	-		Ga0059261_2964	0.45	+0.4
3,080,124	-		Ga0059261_2964	0.45	-0.9
3,080,124	-		Ga0059261_2964	0.45	-0.3
3,080,124	-		Ga0059261_2964	0.45	-0.5
3,080,124	-		Ga0059261_2964	0.45	-0.0
3,080,266	+		Ga0059261_2964	0.54	-0.0
3,080,266	+		Ga0059261_2964	0.54	+1.5
3,080,267	-		Ga0059261_2964	0.54	+0.1
3,080,267	-		Ga0059261_2964	0.54	-1.1
3,080,286	-		Ga0059261_2964	0.55	+0.6
3,080,501	+		Ga0059261_2964	0.69	-0.4
3,080,502	-		Ga0059261_2964	0.69	-0.1
3,080,502	-		Ga0059261_2964	0.69	-0.3
3,080,507	+		Ga0059261_2964	0.69	-0.3
3,080,507	+		Ga0059261_2964	0.69	+0.6
3,080,507	+		Ga0059261_2964	0.69	+1.5
3,080,507	+		Ga0059261_2964	0.69	-1.0
3,080,612	+		Ga0059261_2964	0.76	+0.2
3,080,612	+		Ga0059261_2964	0.76	-0.3
3,080,613	-		Ga0059261_2964	0.76	+0.1
3,080,630	+		Ga0059261_2964	0.77	-0.2
3,080,630	+		Ga0059261_2964	0.77	-0.1
3,080,630	+		Ga0059261_2964	0.77	-0.2
3,080,631	-		Ga0059261_2964	0.77	-0.3
3,080,631	-		Ga0059261_2964	0.77	+0.3
3,080,814	+		Ga0059261_2964	0.89	+0.2
3,080,814	+		Ga0059261_2964	0.89	-0.2
3,080,814	+		Ga0059261_2964	0.89	+0.4
3,080,814	+		Ga0059261_2964	0.89	+1.0
3,080,815	-				+1.6
3,080,815	-		Ga0059261_2964	0.89	+0.2
3,080,815	-		Ga0059261_2964	0.89	-0.5
3,080,825	+				-0.1
3,080,825	+				+0.6
3,081,159	+		Ga0059261_2965	0.17	-1.9
3,081,159	+		Ga0059261_2965	0.17	+0.0
3,081,160	-		Ga0059261_2965	0.17	-0.2
3,081,219	+		Ga0059261_2965	0.23	+0.6
3,081,220	-		Ga0059261_2965	0.23	+0.0
3,081,495	+		Ga0059261_2965	0.50	+0.5
3,081,495	+		Ga0059261_2965	0.50	+0.8
3,081,496	-		Ga0059261_2965	0.50	-0.4
3,081,687	+		Ga0059261_2965	0.69	+0.1
3,081,687	+		Ga0059261_2965	0.69	+0.6
3,081,687	+		Ga0059261_2965	0.69	-1.9
3,081,687	+		Ga0059261_2965	0.69	+0.3
3,081,688	-		Ga0059261_2965	0.69	-0.3
3,081,688	-		Ga0059261_2965	0.69	+0.0
3,081,688	-		Ga0059261_2965	0.69	+0.4
3,081,688	-		Ga0059261_2965	0.69	-0.0
3,081,688	-		Ga0059261_2965	0.69	+0.9
3,081,732	+		Ga0059261_2965	0.73	+0.2
3,081,732	+		Ga0059261_2965	0.73	-0.4
3,081,732	+		Ga0059261_2965	0.73	+0.6
3,081,732	+		Ga0059261_2965	0.73	-0.4
3,081,732	+		Ga0059261_2965	0.73	-0.9
3,081,732	+				+0.1
3,081,733	-		Ga0059261_2965	0.73	-1.1
3,081,756	+		Ga0059261_2965	0.76	+0.3
3,081,756	+		Ga0059261_2965	0.76	-0.6