Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2552

Experiment: D-Cycloserine 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.064 mg/ml
2,638,616	+		Ga0059261_2551	0.15	-0.7
2,638,616	+		Ga0059261_2551	0.15	-0.3
2,638,616	+		Ga0059261_2551	0.15	+0.3
2,638,616	+		Ga0059261_2551	0.15	+1.1
2,638,616	+		Ga0059261_2551	0.15	+0.0
2,638,617	-		Ga0059261_2551	0.15	-0.2
2,638,617	-		Ga0059261_2551	0.15	-0.2
2,638,617	-		Ga0059261_2551	0.15	-2.1
2,638,620	+		Ga0059261_2551	0.16	-0.0
2,638,620	+		Ga0059261_2551	0.16	+0.2
2,638,620	+		Ga0059261_2551	0.16	+0.2
2,638,620	+		Ga0059261_2551	0.16	+0.9
2,638,620	+		Ga0059261_2551	0.16	-0.2
2,638,620	+		Ga0059261_2551	0.16	+0.3
2,638,621	-		Ga0059261_2551	0.16	+0.3
2,638,621	-		Ga0059261_2551	0.16	+0.1
2,638,621	-		Ga0059261_2551	0.16	+0.1
2,638,621	-		Ga0059261_2551	0.16	-1.3
2,638,621	-		Ga0059261_2551	0.16	-0.5
2,638,690	+		Ga0059261_2551	0.22	+0.1
2,638,690	+		Ga0059261_2551	0.22	-0.3
2,638,691	-		Ga0059261_2551	0.22	+0.2
2,638,691	-		Ga0059261_2551	0.22	+0.3
2,638,781	+		Ga0059261_2551	0.30	-0.4
2,638,781	+		Ga0059261_2551	0.30	-1.9
2,638,781	+		Ga0059261_2551	0.30	+0.1
2,638,781	+		Ga0059261_2551	0.30	+1.0
2,638,782	-		Ga0059261_2551	0.30	+0.3
2,638,786	+		Ga0059261_2551	0.31	+0.7
2,638,786	+		Ga0059261_2551	0.31	+0.4
2,638,787	-		Ga0059261_2551	0.31	-1.3
2,638,787	-		Ga0059261_2551	0.31	+0.3
2,638,787	-		Ga0059261_2551	0.31	-0.1
2,638,787	-		Ga0059261_2551	0.31	+0.4
2,638,878	+		Ga0059261_2551	0.39	-0.9
2,638,879	-				-0.3
2,638,879	-		Ga0059261_2551	0.39	-0.9
2,638,879	-		Ga0059261_2551	0.39	-0.3
2,638,879	-		Ga0059261_2551	0.39	-0.1
2,639,026	+		Ga0059261_2551	0.53	-0.1
2,639,027	-		Ga0059261_2551	0.53	+0.3
2,639,027	-		Ga0059261_2551	0.53	+0.7
2,639,080	+		Ga0059261_2551	0.57	-0.9
2,639,081	-		Ga0059261_2551	0.58	-1.3
2,639,081	-		Ga0059261_2551	0.58	+0.3
2,639,081	-		Ga0059261_2551	0.58	-1.1
2,639,096	-		Ga0059261_2551	0.59	-0.1
2,639,096	-		Ga0059261_2551	0.59	+1.1
2,639,096	-		Ga0059261_2551	0.59	+0.2
2,639,096	-		Ga0059261_2551	0.59	-0.2
2,639,096	-		Ga0059261_2551	0.59	+0.3
2,639,109	+		Ga0059261_2551	0.60	-0.4
2,639,110	-		Ga0059261_2551	0.60	-0.6
2,639,219	-		Ga0059261_2551	0.70	+0.2
2,639,262	+		Ga0059261_2551	0.74	+0.4
2,639,262	+		Ga0059261_2551	0.74	+0.3
2,639,262	+		Ga0059261_2551	0.74	+0.6
2,639,263	-		Ga0059261_2551	0.74	-0.3
2,639,263	-		Ga0059261_2551	0.74	-0.3
2,639,263	-		Ga0059261_2551	0.74	-0.3
2,639,263	-		Ga0059261_2551	0.74	+1.0
2,639,409	+		Ga0059261_2551	0.87	-0.6
2,639,409	+		Ga0059261_2551	0.87	+0.3
2,639,409	+		Ga0059261_2551	0.87	+0.3
2,639,409	+		Ga0059261_2551	0.87	-0.3
2,639,410	-		Ga0059261_2551	0.88	+0.4
2,639,410	-		Ga0059261_2551	0.88	-0.0
2,639,410	-		Ga0059261_2551	0.88	-0.1
2,639,410	-		Ga0059261_2551	0.88	-0.1
2,639,410	-		Ga0059261_2551	0.88	+0.2
2,639,593	+				+0.2
2,639,593	+				+0.3
2,639,593	+				+0.6
2,639,593	+				+0.0
2,639,593	+				+0.3
2,639,593	+				+0.2
2,639,593	+				+0.4
2,639,593	+				+0.0
2,639,593	+				+0.6
2,639,593	+				-0.3
2,639,594	-				+0.1
2,639,594	-				+0.7
2,639,594	-				-0.6
2,639,594	-				+0.0
2,639,594	-				-1.1
2,639,594	-				-0.4
2,639,594	-				+0.1
2,639,594	-				-0.5
2,639,594	-				-0.4
2,639,594	-				+0.3
2,639,725	+		Ga0059261_2552	0.20	+0.1
2,639,726	-		Ga0059261_2552	0.20	-0.3
2,639,726	-		Ga0059261_2552	0.20	+0.1
2,639,899	+		Ga0059261_2552	0.39	-0.3
2,640,066	+		Ga0059261_2552	0.57	+0.0
2,640,066	+		Ga0059261_2552	0.57	-0.3
2,640,066	+		Ga0059261_2552	0.57	-0.3
2,640,067	-		Ga0059261_2552	0.57	+2.0
2,640,067	-		Ga0059261_2552	0.57	+0.2
2,640,067	-		Ga0059261_2552	0.57	-0.6
2,640,157	+		Ga0059261_2552	0.66	-0.1
2,640,206	+		Ga0059261_2552	0.72	+0.3
2,640,206	+		Ga0059261_2552	0.72	-0.2
2,640,207	-		Ga0059261_2552	0.72	+0.2
2,640,207	-		Ga0059261_2552	0.72	-0.5
2,640,235	+		Ga0059261_2552	0.75	+1.4
2,640,236	-		Ga0059261_2552	0.75	+0.5
2,640,236	-		Ga0059261_2552	0.75	+0.3
2,640,485	+				-2.7
2,640,485	+				-0.9
2,640,485	+				-0.2
2,640,485	+				-0.1
2,640,485	+				+0.7
2,640,485	+				+0.1
2,640,485	+				-0.2
2,640,485	+				+0.2
2,640,485	+				-0.5
2,640,485	+				+0.1
2,640,486	-				-0.5
2,640,486	-				+0.4
2,640,486	-				-0.1
2,640,486	-				+0.1
2,640,487	+				+0.2
2,640,487	+				-1.6
2,640,487	+				-0.7
2,640,488	-				-0.1
2,640,488	-				-0.3
2,640,488	-				+0.9
2,640,488	-				+1.0
2,640,488	-				+0.1
2,640,488	-				-0.4
2,640,488	-				-0.3
2,640,612	+		Ga0059261_2553	0.11	-0.3
2,640,612	+		Ga0059261_2553	0.11	+0.5
2,640,612	+		Ga0059261_2553	0.11	-0.9
2,640,612	+		Ga0059261_2553	0.11	+0.2
2,640,612	+		Ga0059261_2553	0.11	-0.2
2,640,612	+		Ga0059261_2553	0.11	-0.3
2,640,612	+		Ga0059261_2553	0.11	-0.6
2,640,613	-		Ga0059261_2553	0.11	-0.5
2,640,613	-		Ga0059261_2553	0.11	+0.5
2,640,613	-		Ga0059261_2553	0.11	-1.1
2,640,613	-		Ga0059261_2553	0.11	+0.8
2,640,613	-		Ga0059261_2553	0.11	+0.1
2,640,613	-		Ga0059261_2553	0.11	+0.5
2,640,613	-		Ga0059261_2553	0.11	-0.7
2,640,653	-		Ga0059261_2553	0.14	+0.2
2,640,683	+		Ga0059261_2553	0.16	+0.4
2,640,683	+		Ga0059261_2553	0.16	+0.0
2,640,684	-		Ga0059261_2553	0.16	-0.7
2,640,684	-		Ga0059261_2553	0.16	-0.1
2,640,791	-		Ga0059261_2553	0.23	-0.8
2,640,791	-		Ga0059261_2553	0.23	+0.3
2,640,791	-				-1.3
2,640,791	-		Ga0059261_2553	0.23	-0.3
2,640,791	-		Ga0059261_2553	0.23	+0.6
2,640,871	+		Ga0059261_2553	0.29	-0.5
2,640,974	-		Ga0059261_2553	0.36	+1.0
2,641,174	+		Ga0059261_2553	0.49	+0.4
2,641,174	+		Ga0059261_2553	0.49	+0.3
2,641,175	-		Ga0059261_2553	0.49	+0.0
2,641,175	-		Ga0059261_2553	0.49	-0.1
2,641,175	-		Ga0059261_2553	0.49	+0.0
2,641,176	+		Ga0059261_2553	0.49	+0.1
2,641,176	+		Ga0059261_2553	0.49	+0.0
2,641,176	+		Ga0059261_2553	0.49	+0.3
2,641,176	+		Ga0059261_2553	0.49	-0.0
2,641,176	+		Ga0059261_2553	0.49	-0.2
2,641,177	-		Ga0059261_2553	0.49	-0.4
2,641,177	-		Ga0059261_2553	0.49	+0.7
2,641,177	-		Ga0059261_2553	0.49	-0.7
2,641,375	+		Ga0059261_2553	0.63	+0.1
2,641,375	+		Ga0059261_2553	0.63	-0.6
2,641,375	+		Ga0059261_2553	0.63	+0.5
2,641,375	+		Ga0059261_2553	0.63	-0.1
2,641,375	+		Ga0059261_2553	0.63	+0.4