Experiment: D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2397 and Ga0059261_2398 are separated by 36 nucleotides Ga0059261_2398 and Ga0059261_2399 are separated by 78 nucleotides Ga0059261_2399 and Ga0059261_2400 are separated by 72 nucleotides Ga0059261_2400 and Ga0059261_2401 are separated by 32 nucleotides
Ga0059261_2397: Ga0059261_2397 - Uncharacterized conserved protein, at 2,493,787 to 2,495,124
_2397
Ga0059261_2398: Ga0059261_2398 - hypothetical protein, at 2,495,161 to 2,495,484
_2398
Ga0059261_2399: Ga0059261_2399 - PilZ domain, at 2,495,563 to 2,496,198
_2399
Ga0059261_2400: Ga0059261_2400 - Uncharacterized conserved protein, at 2,496,271 to 2,497,011
_2400
Ga0059261_2401: Ga0059261_2401 - Spermine/spermidine synthase, at 2,497,044 to 2,497,724
_2401
Position (kb)
2495
2496
2497 Strain fitness (log2 ratio)
-1
0
1
2 at 2494.588 kb on - strand, within Ga0059261_2397 at 2494.936 kb on + strand, within Ga0059261_2397 at 2494.936 kb on + strand, within Ga0059261_2397 at 2494.936 kb on + strand, within Ga0059261_2397 at 2494.936 kb on + strand, within Ga0059261_2397 at 2494.936 kb on + strand, within Ga0059261_2397 at 2494.937 kb on - strand, within Ga0059261_2397 at 2494.937 kb on - strand, within Ga0059261_2397 at 2495.017 kb on + strand at 2495.017 kb on + strand at 2495.018 kb on - strand at 2495.230 kb on + strand at 2495.230 kb on + strand, within Ga0059261_2398 at 2495.231 kb on - strand, within Ga0059261_2398 at 2495.231 kb on - strand, within Ga0059261_2398 at 2495.231 kb on - strand, within Ga0059261_2398 at 2495.231 kb on - strand, within Ga0059261_2398 at 2495.231 kb on - strand at 2495.231 kb on - strand, within Ga0059261_2398 at 2495.231 kb on - strand, within Ga0059261_2398 at 2495.231 kb on - strand, within Ga0059261_2398 at 2495.247 kb on + strand, within Ga0059261_2398 at 2495.247 kb on + strand, within Ga0059261_2398 at 2495.248 kb on - strand, within Ga0059261_2398 at 2495.248 kb on - strand, within Ga0059261_2398 at 2495.357 kb on + strand, within Ga0059261_2398 at 2495.439 kb on - strand, within Ga0059261_2398 at 2495.441 kb on + strand, within Ga0059261_2398 at 2495.442 kb on - strand, within Ga0059261_2398 at 2495.489 kb on + strand at 2495.531 kb on - strand at 2495.531 kb on - strand at 2495.536 kb on + strand at 2495.537 kb on - strand at 2495.537 kb on - strand at 2495.537 kb on - strand at 2495.537 kb on - strand at 2495.697 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.728 kb on + strand, within Ga0059261_2399 at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.729 kb on - strand at 2495.729 kb on - strand, within Ga0059261_2399 at 2495.860 kb on + strand, within Ga0059261_2399 at 2495.860 kb on + strand, within Ga0059261_2399 at 2495.861 kb on - strand, within Ga0059261_2399 at 2495.861 kb on - strand, within Ga0059261_2399 at 2495.861 kb on - strand, within Ga0059261_2399 at 2495.861 kb on - strand, within Ga0059261_2399 at 2495.861 kb on - strand, within Ga0059261_2399 at 2496.580 kb on + strand, within Ga0059261_2400 at 2496.580 kb on + strand, within Ga0059261_2400 at 2496.580 kb on + strand, within Ga0059261_2400 at 2496.581 kb on - strand, within Ga0059261_2400 at 2496.581 kb on - strand, within Ga0059261_2400 at 2496.581 kb on - strand, within Ga0059261_2400 at 2496.581 kb on - strand, within Ga0059261_2400 at 2496.581 kb on - strand, within Ga0059261_2400 at 2496.581 kb on - strand, within Ga0059261_2400 at 2496.581 kb on - strand, within Ga0059261_2400 at 2496.581 kb on - strand, within Ga0059261_2400 at 2496.581 kb on - strand, within Ga0059261_2400 at 2496.581 kb on - strand, within Ga0059261_2400 at 2496.581 kb on - strand, within Ga0059261_2400 at 2497.036 kb on + strand at 2497.036 kb on + strand at 2497.036 kb on + strand at 2497.037 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.064 mg/ml remove 2,494,588 - Ga0059261_2397 0.60 +0.8 2,494,936 + Ga0059261_2397 0.86 +0.6 2,494,936 + Ga0059261_2397 0.86 -0.5 2,494,936 + Ga0059261_2397 0.86 +2.2 2,494,936 + Ga0059261_2397 0.86 +1.0 2,494,936 + Ga0059261_2397 0.86 +0.6 2,494,937 - Ga0059261_2397 0.86 +0.9 2,494,937 - Ga0059261_2397 0.86 +0.7 2,495,017 + +0.3 2,495,017 + +1.1 2,495,018 - +0.2 2,495,230 + +0.6 2,495,230 + Ga0059261_2398 0.21 +0.2 2,495,231 - Ga0059261_2398 0.22 +0.6 2,495,231 - Ga0059261_2398 0.22 +1.4 2,495,231 - Ga0059261_2398 0.22 -0.4 2,495,231 - Ga0059261_2398 0.22 +1.1 2,495,231 - +1.0 2,495,231 - Ga0059261_2398 0.22 +0.8 2,495,231 - Ga0059261_2398 0.22 -0.4 2,495,231 - Ga0059261_2398 0.22 +0.2 2,495,247 + Ga0059261_2398 0.27 +1.0 2,495,247 + Ga0059261_2398 0.27 +0.9 2,495,248 - Ga0059261_2398 0.27 +0.8 2,495,248 - Ga0059261_2398 0.27 -0.4 2,495,357 + Ga0059261_2398 0.60 +0.5 2,495,439 - Ga0059261_2398 0.86 -0.2 2,495,441 + Ga0059261_2398 0.86 +0.7 2,495,442 - Ga0059261_2398 0.87 +0.5 2,495,489 + +1.3 2,495,531 - +1.8 2,495,531 - +0.8 2,495,536 + +1.5 2,495,537 - +0.9 2,495,537 - +1.5 2,495,537 - +0.5 2,495,537 - +0.9 2,495,697 + Ga0059261_2399 0.21 +1.0 2,495,728 + Ga0059261_2399 0.26 +0.1 2,495,728 + Ga0059261_2399 0.26 -0.3 2,495,728 + Ga0059261_2399 0.26 +0.6 2,495,728 + Ga0059261_2399 0.26 +0.6 2,495,728 + Ga0059261_2399 0.26 -1.0 2,495,728 + Ga0059261_2399 0.26 -0.1 2,495,728 + Ga0059261_2399 0.26 +1.0 2,495,728 + Ga0059261_2399 0.26 -0.4 2,495,728 + Ga0059261_2399 0.26 +0.9 2,495,728 + Ga0059261_2399 0.26 -0.6 2,495,728 + Ga0059261_2399 0.26 +0.8 2,495,728 + Ga0059261_2399 0.26 +0.4 2,495,729 - Ga0059261_2399 0.26 +0.3 2,495,729 - Ga0059261_2399 0.26 +0.0 2,495,729 - Ga0059261_2399 0.26 -0.6 2,495,729 - Ga0059261_2399 0.26 +0.4 2,495,729 - Ga0059261_2399 0.26 -0.2 2,495,729 - Ga0059261_2399 0.26 +0.2 2,495,729 - Ga0059261_2399 0.26 -0.0 2,495,729 - Ga0059261_2399 0.26 +0.6 2,495,729 - Ga0059261_2399 0.26 -0.2 2,495,729 - Ga0059261_2399 0.26 -0.1 2,495,729 - Ga0059261_2399 0.26 +1.2 2,495,729 - +0.6 2,495,729 - Ga0059261_2399 0.26 +0.6 2,495,860 + Ga0059261_2399 0.47 +0.7 2,495,860 + Ga0059261_2399 0.47 +1.0 2,495,861 - Ga0059261_2399 0.47 +0.6 2,495,861 - Ga0059261_2399 0.47 -0.0 2,495,861 - Ga0059261_2399 0.47 +1.3 2,495,861 - Ga0059261_2399 0.47 +0.0 2,495,861 - Ga0059261_2399 0.47 +1.5 2,496,580 + Ga0059261_2400 0.42 +1.6 2,496,580 + Ga0059261_2400 0.42 +1.0 2,496,580 + Ga0059261_2400 0.42 +1.1 2,496,581 - Ga0059261_2400 0.42 +0.6 2,496,581 - Ga0059261_2400 0.42 +0.7 2,496,581 - Ga0059261_2400 0.42 +1.7 2,496,581 - Ga0059261_2400 0.42 +0.1 2,496,581 - Ga0059261_2400 0.42 +1.2 2,496,581 - Ga0059261_2400 0.42 +0.9 2,496,581 - Ga0059261_2400 0.42 +1.2 2,496,581 - Ga0059261_2400 0.42 +0.3 2,496,581 - Ga0059261_2400 0.42 +0.6 2,496,581 - Ga0059261_2400 0.42 +0.3 2,496,581 - Ga0059261_2400 0.42 +0.4 2,497,036 + +0.6 2,497,036 + +0.9 2,497,036 + +1.3 2,497,037 - +1.2
Or see this region's nucleotide sequence