Experiment: D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2130 and Ga0059261_2131 are separated by 156 nucleotides Ga0059261_2131 and Ga0059261_2132 are separated by 118 nucleotides Ga0059261_2132 and Ga0059261_2133 are separated by 48 nucleotides Ga0059261_2133 and Ga0059261_2134 are separated by 39 nucleotides
Ga0059261_2130: Ga0059261_2130 - Uncharacterized conserved protein, at 2,243,671 to 2,244,255
_2130
Ga0059261_2131: Ga0059261_2131 - large conductance mechanosensitive channel protein, at 2,244,412 to 2,244,840
_2131
Ga0059261_2132: Ga0059261_2132 - transcriptional regulator, BadM/Rrf2 family, at 2,244,959 to 2,245,390
_2132
Ga0059261_2133: Ga0059261_2133 - RNA, at 2,245,439 to 2,245,799
_2133
Ga0059261_2134: Ga0059261_2134 - Beta-lactamase class C and other penicillin binding proteins, at 2,245,839 to 2,246,996
_2134
Position (kb)
2244
2245
2246 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2244.135 kb on - strand, within Ga0059261_2130 at 2244.135 kb on - strand, within Ga0059261_2130 at 2244.263 kb on + strand at 2244.264 kb on - strand at 2244.264 kb on - strand at 2244.264 kb on - strand at 2244.264 kb on - strand at 2244.289 kb on - strand at 2244.304 kb on + strand at 2244.304 kb on + strand at 2244.305 kb on - strand at 2244.333 kb on - strand at 2244.574 kb on + strand, within Ga0059261_2131 at 2244.574 kb on + strand, within Ga0059261_2131 at 2244.574 kb on + strand, within Ga0059261_2131 at 2244.574 kb on + strand, within Ga0059261_2131 at 2244.575 kb on - strand, within Ga0059261_2131 at 2244.575 kb on - strand, within Ga0059261_2131 at 2244.625 kb on + strand, within Ga0059261_2131 at 2244.625 kb on + strand, within Ga0059261_2131 at 2244.625 kb on + strand, within Ga0059261_2131 at 2244.625 kb on + strand, within Ga0059261_2131 at 2244.626 kb on - strand, within Ga0059261_2131 at 2244.626 kb on - strand, within Ga0059261_2131 at 2244.626 kb on - strand, within Ga0059261_2131 at 2244.626 kb on - strand, within Ga0059261_2131 at 2244.664 kb on + strand, within Ga0059261_2131 at 2244.664 kb on + strand, within Ga0059261_2131 at 2244.664 kb on + strand, within Ga0059261_2131 at 2244.665 kb on - strand, within Ga0059261_2131 at 2244.665 kb on - strand, within Ga0059261_2131 at 2244.839 kb on - strand at 2244.839 kb on - strand at 2244.839 kb on - strand at 2244.839 kb on - strand at 2244.886 kb on + strand at 2244.886 kb on + strand at 2244.886 kb on + strand at 2244.886 kb on + strand at 2244.886 kb on + strand at 2244.887 kb on - strand at 2244.887 kb on - strand at 2244.891 kb on + strand at 2244.891 kb on + strand at 2244.891 kb on + strand at 2244.891 kb on + strand at 2244.891 kb on + strand at 2244.891 kb on + strand at 2244.891 kb on + strand at 2244.891 kb on + strand at 2244.891 kb on + strand at 2244.891 kb on + strand at 2244.891 kb on + strand at 2244.892 kb on - strand at 2244.892 kb on - strand at 2244.892 kb on - strand at 2244.892 kb on - strand at 2244.892 kb on - strand at 2244.892 kb on - strand at 2244.892 kb on - strand at 2244.892 kb on - strand at 2244.960 kb on + strand at 2244.961 kb on - strand at 2244.961 kb on - strand at 2245.300 kb on + strand, within Ga0059261_2132 at 2245.300 kb on + strand, within Ga0059261_2132 at 2245.300 kb on + strand, within Ga0059261_2132 at 2245.301 kb on - strand, within Ga0059261_2132 at 2245.368 kb on + strand at 2245.369 kb on - strand at 2245.978 kb on + strand, within Ga0059261_2134 at 2245.978 kb on + strand, within Ga0059261_2134 at 2245.978 kb on + strand, within Ga0059261_2134 at 2245.979 kb on - strand, within Ga0059261_2134 at 2245.979 kb on - strand, within Ga0059261_2134 at 2245.979 kb on - strand, within Ga0059261_2134 at 2246.039 kb on + strand, within Ga0059261_2134 at 2246.039 kb on + strand, within Ga0059261_2134 at 2246.039 kb on + strand, within Ga0059261_2134 at 2246.040 kb on - strand, within Ga0059261_2134 at 2246.077 kb on + strand, within Ga0059261_2134 at 2246.078 kb on - strand, within Ga0059261_2134 at 2246.078 kb on - strand, within Ga0059261_2134 at 2246.086 kb on + strand, within Ga0059261_2134 at 2246.086 kb on + strand, within Ga0059261_2134 at 2246.086 kb on + strand, within Ga0059261_2134 at 2246.087 kb on - strand, within Ga0059261_2134 at 2246.087 kb on - strand, within Ga0059261_2134 at 2246.087 kb on - strand, within Ga0059261_2134 at 2246.087 kb on - strand, within Ga0059261_2134 at 2246.087 kb on - strand, within Ga0059261_2134 at 2246.122 kb on + strand, within Ga0059261_2134 at 2246.122 kb on + strand, within Ga0059261_2134 at 2246.122 kb on + strand, within Ga0059261_2134 at 2246.122 kb on + strand, within Ga0059261_2134 at 2246.371 kb on + strand, within Ga0059261_2134 at 2246.371 kb on + strand, within Ga0059261_2134 at 2246.371 kb on + strand, within Ga0059261_2134 at 2246.372 kb on - strand, within Ga0059261_2134
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.064 mg/ml remove 2,244,135 - Ga0059261_2130 0.79 +0.5 2,244,135 - Ga0059261_2130 0.79 +0.3 2,244,263 + -0.1 2,244,264 - +0.3 2,244,264 - +0.3 2,244,264 - +0.2 2,244,264 - +1.0 2,244,289 - -0.0 2,244,304 + +2.3 2,244,304 + +0.3 2,244,305 - +0.7 2,244,333 - +0.1 2,244,574 + Ga0059261_2131 0.38 +0.3 2,244,574 + Ga0059261_2131 0.38 +1.5 2,244,574 + Ga0059261_2131 0.38 -0.1 2,244,574 + Ga0059261_2131 0.38 -0.3 2,244,575 - Ga0059261_2131 0.38 +1.0 2,244,575 - Ga0059261_2131 0.38 +0.6 2,244,625 + Ga0059261_2131 0.50 +0.5 2,244,625 + Ga0059261_2131 0.50 -0.4 2,244,625 + Ga0059261_2131 0.50 +0.6 2,244,625 + Ga0059261_2131 0.50 +0.6 2,244,626 - Ga0059261_2131 0.50 +0.6 2,244,626 - Ga0059261_2131 0.50 +2.1 2,244,626 - Ga0059261_2131 0.50 +0.8 2,244,626 - Ga0059261_2131 0.50 +0.2 2,244,664 + Ga0059261_2131 0.59 +1.3 2,244,664 + Ga0059261_2131 0.59 +0.4 2,244,664 + Ga0059261_2131 0.59 +0.5 2,244,665 - Ga0059261_2131 0.59 +0.5 2,244,665 - Ga0059261_2131 0.59 +1.4 2,244,839 - -0.1 2,244,839 - +0.8 2,244,839 - +1.2 2,244,839 - +1.6 2,244,886 + +0.8 2,244,886 + +0.5 2,244,886 + +0.6 2,244,886 + +0.9 2,244,886 + +0.1 2,244,887 - -0.6 2,244,887 - +0.1 2,244,891 + +0.3 2,244,891 + +0.2 2,244,891 + -0.1 2,244,891 + -0.2 2,244,891 + -0.9 2,244,891 + +1.6 2,244,891 + -0.4 2,244,891 + +0.5 2,244,891 + -0.0 2,244,891 + +0.6 2,244,891 + +0.6 2,244,892 - +0.3 2,244,892 - +0.3 2,244,892 - +1.1 2,244,892 - -2.7 2,244,892 - -0.7 2,244,892 - +0.8 2,244,892 - +0.3 2,244,892 - +0.3 2,244,960 + +0.0 2,244,961 - +0.4 2,244,961 - +0.2 2,245,300 + Ga0059261_2132 0.79 +0.9 2,245,300 + Ga0059261_2132 0.79 +0.7 2,245,300 + Ga0059261_2132 0.79 +0.8 2,245,301 - Ga0059261_2132 0.79 +0.5 2,245,368 + +0.6 2,245,369 - +0.2 2,245,978 + Ga0059261_2134 0.12 +0.5 2,245,978 + Ga0059261_2134 0.12 +0.4 2,245,978 + Ga0059261_2134 0.12 +0.5 2,245,979 - Ga0059261_2134 0.12 +0.2 2,245,979 - Ga0059261_2134 0.12 +0.3 2,245,979 - Ga0059261_2134 0.12 +0.8 2,246,039 + Ga0059261_2134 0.17 -0.9 2,246,039 + Ga0059261_2134 0.17 +0.6 2,246,039 + Ga0059261_2134 0.17 +0.6 2,246,040 - Ga0059261_2134 0.17 -0.1 2,246,077 + Ga0059261_2134 0.21 +0.8 2,246,078 - Ga0059261_2134 0.21 +0.6 2,246,078 - Ga0059261_2134 0.21 +0.8 2,246,086 + Ga0059261_2134 0.21 +0.1 2,246,086 + Ga0059261_2134 0.21 +0.1 2,246,086 + Ga0059261_2134 0.21 +0.3 2,246,087 - Ga0059261_2134 0.21 +0.9 2,246,087 - Ga0059261_2134 0.21 -2.2 2,246,087 - Ga0059261_2134 0.21 +0.7 2,246,087 - Ga0059261_2134 0.21 +0.4 2,246,087 - Ga0059261_2134 0.21 +0.9 2,246,122 + Ga0059261_2134 0.24 +0.5 2,246,122 + Ga0059261_2134 0.24 +1.2 2,246,122 + Ga0059261_2134 0.24 +0.1 2,246,122 + Ga0059261_2134 0.24 +1.1 2,246,371 + Ga0059261_2134 0.46 +1.0 2,246,371 + Ga0059261_2134 0.46 +0.2 2,246,371 + Ga0059261_2134 0.46 +0.7 2,246,372 - Ga0059261_2134 0.46 +0.5
Or see this region's nucleotide sequence