Experiment: D-Cycloserine 0.064 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1212 and Ga0059261_1213 are separated by 66 nucleotides Ga0059261_1213 and Ga0059261_1214 are separated by 368 nucleotides Ga0059261_1214 and Ga0059261_1215 are separated by 129 nucleotides
Ga0059261_1212: Ga0059261_1212 - Outer membrane protein, at 1,267,435 to 1,268,673
_1212
Ga0059261_1213: Ga0059261_1213 - hypothetical protein, at 1,268,740 to 1,269,123
_1213
Ga0059261_1214: Ga0059261_1214 - hypothetical protein, at 1,269,492 to 1,269,989
_1214
Ga0059261_1215: Ga0059261_1215 - Transposase DDE domain group 1, at 1,270,119 to 1,271,489
_1215
Position (kb)
1269
1270 Strain fitness (log2 ratio)
-1
0
1 at 1268.669 kb on + strand at 1268.669 kb on + strand at 1268.669 kb on + strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.670 kb on - strand at 1268.840 kb on - strand, within Ga0059261_1213 at 1269.015 kb on + strand, within Ga0059261_1213 at 1269.015 kb on + strand, within Ga0059261_1213 at 1269.016 kb on - strand, within Ga0059261_1213 at 1269.135 kb on + strand at 1269.136 kb on - strand at 1269.148 kb on - strand at 1269.148 kb on - strand at 1269.151 kb on + strand at 1269.152 kb on - strand at 1269.152 kb on - strand at 1269.152 kb on - strand at 1269.165 kb on + strand at 1269.165 kb on + strand at 1269.169 kb on + strand at 1269.169 kb on + strand at 1269.170 kb on - strand at 1269.178 kb on + strand at 1269.194 kb on + strand at 1269.195 kb on - strand at 1269.195 kb on - strand at 1269.241 kb on - strand at 1269.285 kb on - strand at 1269.285 kb on - strand at 1269.285 kb on - strand at 1269.285 kb on - strand at 1269.285 kb on - strand at 1269.293 kb on - strand at 1269.293 kb on - strand at 1269.928 kb on + strand, within Ga0059261_1214
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.064 mg/ml remove 1,268,669 + -0.0 1,268,669 + +0.1 1,268,669 + -0.8 1,268,670 - +0.2 1,268,670 - +0.5 1,268,670 - +0.5 1,268,670 - +0.2 1,268,670 - -0.2 1,268,670 - -0.9 1,268,670 - +0.1 1,268,840 - Ga0059261_1213 0.26 -0.4 1,269,015 + Ga0059261_1213 0.72 +0.2 1,269,015 + Ga0059261_1213 0.72 +1.0 1,269,016 - Ga0059261_1213 0.72 +0.6 1,269,135 + +0.5 1,269,136 - -0.7 1,269,148 - -0.6 1,269,148 - +0.1 1,269,151 + +0.1 1,269,152 - -0.4 1,269,152 - +0.3 1,269,152 - -0.5 1,269,165 + +0.2 1,269,165 + -0.6 1,269,169 + -0.7 1,269,169 + +0.1 1,269,170 - -0.5 1,269,178 + +0.4 1,269,194 + +0.1 1,269,195 - +0.7 1,269,195 - +0.5 1,269,241 - -0.4 1,269,285 - -0.2 1,269,285 - -0.1 1,269,285 - -0.4 1,269,285 - -0.2 1,269,285 - +0.1 1,269,293 - +0.1 1,269,293 - -0.8 1,269,928 + Ga0059261_1214 0.88 +0.3
Or see this region's nucleotide sequence