Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS06245 and CA265_RS06250 are separated by 203 nucleotides CA265_RS06250 and CA265_RS06255 are separated by 6 nucleotides CA265_RS06255 and CA265_RS06260 are separated by 163 nucleotides
CA265_RS06245: CA265_RS06245 - hypothetical protein, at 1,537,328 to 1,537,546
_RS06245
CA265_RS06250: CA265_RS06250 - RNA polymerase subunit sigma-70, at 1,537,750 to 1,538,316
_RS06250
CA265_RS06255: CA265_RS06255 - serine protease, at 1,538,323 to 1,539,417
_RS06255
CA265_RS06260: CA265_RS06260 - peroxidase, at 1,539,581 to 1,540,216
_RS06260
Position (kb)
1538
1539
1540 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1537.725 kb on + strand at 1537.741 kb on + strand at 1537.808 kb on + strand, within CA265_RS06250 at 1537.849 kb on + strand, within CA265_RS06250 at 1538.058 kb on + strand, within CA265_RS06250 at 1538.241 kb on + strand, within CA265_RS06250 at 1538.342 kb on + strand at 1538.412 kb on - strand at 1538.454 kb on + strand, within CA265_RS06255 at 1538.455 kb on - strand, within CA265_RS06255 at 1538.520 kb on + strand, within CA265_RS06255 at 1538.521 kb on - strand, within CA265_RS06255 at 1538.605 kb on - strand, within CA265_RS06255 at 1538.664 kb on + strand, within CA265_RS06255 at 1538.994 kb on - strand, within CA265_RS06255 at 1539.008 kb on - strand, within CA265_RS06255 at 1539.036 kb on - strand, within CA265_RS06255 at 1539.447 kb on + strand at 1539.537 kb on + strand at 1539.702 kb on - strand, within CA265_RS06260 at 1539.786 kb on + strand, within CA265_RS06260 at 1539.847 kb on + strand, within CA265_RS06260 at 1539.848 kb on - strand at 1539.901 kb on - strand, within CA265_RS06260 at 1539.907 kb on + strand, within CA265_RS06260 at 1539.908 kb on - strand, within CA265_RS06260 at 1539.984 kb on + strand, within CA265_RS06260 at 1539.991 kb on + strand, within CA265_RS06260 at 1540.030 kb on - strand, within CA265_RS06260 at 1540.030 kb on - strand, within CA265_RS06260 at 1540.067 kb on + strand, within CA265_RS06260 at 1540.070 kb on - strand, within CA265_RS06260 at 1540.110 kb on + strand, within CA265_RS06260 at 1540.120 kb on - strand, within CA265_RS06260 at 1540.130 kb on - strand, within CA265_RS06260 at 1540.130 kb on - strand, within CA265_RS06260 at 1540.174 kb on - strand at 1540.189 kb on - strand at 1540.215 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,537,725 + +0.1 1,537,741 + -0.5 1,537,808 + CA265_RS06250 0.10 -1.3 1,537,849 + CA265_RS06250 0.17 -0.5 1,538,058 + CA265_RS06250 0.54 -1.8 1,538,241 + CA265_RS06250 0.87 -0.3 1,538,342 + +1.9 1,538,412 - -2.2 1,538,454 + CA265_RS06255 0.12 +0.9 1,538,455 - CA265_RS06255 0.12 -2.8 1,538,520 + CA265_RS06255 0.18 -1.1 1,538,521 - CA265_RS06255 0.18 -1.6 1,538,605 - CA265_RS06255 0.26 -1.1 1,538,664 + CA265_RS06255 0.31 -1.2 1,538,994 - CA265_RS06255 0.61 +0.8 1,539,008 - CA265_RS06255 0.63 -0.4 1,539,036 - CA265_RS06255 0.65 -0.5 1,539,447 + +0.0 1,539,537 + -0.2 1,539,702 - CA265_RS06260 0.19 +0.3 1,539,786 + CA265_RS06260 0.32 +0.3 1,539,847 + CA265_RS06260 0.42 -0.8 1,539,848 - +0.2 1,539,901 - CA265_RS06260 0.50 +0.2 1,539,907 + CA265_RS06260 0.51 -0.7 1,539,908 - CA265_RS06260 0.51 -0.6 1,539,984 + CA265_RS06260 0.63 -1.0 1,539,991 + CA265_RS06260 0.64 -0.4 1,540,030 - CA265_RS06260 0.71 +1.7 1,540,030 - CA265_RS06260 0.71 -0.1 1,540,067 + CA265_RS06260 0.76 -0.9 1,540,070 - CA265_RS06260 0.77 -0.3 1,540,110 + CA265_RS06260 0.83 -0.9 1,540,120 - CA265_RS06260 0.85 -2.2 1,540,130 - CA265_RS06260 0.86 +0.1 1,540,130 - CA265_RS06260 0.86 +0.6 1,540,174 - -0.2 1,540,189 - +0.7 1,540,215 - +0.2
Or see this region's nucleotide sequence