Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12855

Experiment: 1-ethyl-3-methylimidazolium lysine 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium lysine 10 mM
2,925,672	+		AO356_12845	0.73	+0.4
2,925,672	+		AO356_12845	0.73	-0.5
2,925,672	+		AO356_12845	0.73	+0.6
2,925,672	+		AO356_12845	0.73	-0.1
2,925,672	+		AO356_12845	0.73	-0.5
2,925,699	+		AO356_12845	0.76	-0.7
2,925,699	+		AO356_12845	0.76	+0.3
2,925,699	+		AO356_12845	0.76	-0.2
2,925,700	-		AO356_12845	0.76	-0.1
2,925,723	+		AO356_12845	0.80	+0.2
2,925,724	-		AO356_12845	0.80	+0.2
2,925,724	-		AO356_12845	0.80	+0.2
2,925,768	+		AO356_12845	0.86	+0.1
2,925,768	+		AO356_12845	0.86	-0.2
2,925,768	+		AO356_12845	0.86	+0.4
2,925,768	+		AO356_12845	0.86	-0.8
2,925,768	+		AO356_12845	0.86	+0.4
2,925,768	+		AO356_12845	0.86	+2.1
2,925,768	+		AO356_12845	0.86	-0.9
2,925,768	+		AO356_12845	0.86	+0.2
2,925,768	+		AO356_12845	0.86	+0.6
2,925,769	-		AO356_12845	0.86	+0.3
2,925,769	-		AO356_12845	0.86	+0.6
2,925,769	-		AO356_12845	0.86	+0.6
2,925,769	-		AO356_12845	0.86	-0.0
2,925,769	-		AO356_12845	0.86	-1.7
2,925,769	-		AO356_12845	0.86	+0.5
2,925,769	-		AO356_12845	0.86	+1.0
2,925,861	-				+0.1
2,925,861	-				-0.3
2,925,966	+		AO356_12850	0.15	+1.0
2,925,966	+		AO356_12850	0.15	+1.6
2,925,967	-		AO356_12850	0.15	-0.2
2,925,967	-		AO356_12850	0.15	+0.8
2,925,967	-		AO356_12850	0.15	+0.9
2,925,981	+		AO356_12850	0.18	+0.1
2,925,981	+		AO356_12850	0.18	+0.9
2,925,981	+		AO356_12850	0.18	+0.1
2,925,981	+		AO356_12850	0.18	+0.4
2,925,981	+		AO356_12850	0.18	-1.6
2,925,982	-		AO356_12850	0.18	+1.6
2,925,982	-		AO356_12850	0.18	+1.3
2,925,982	-		AO356_12850	0.18	-0.2
2,925,982	-		AO356_12850	0.18	-0.4
2,925,982	-		AO356_12850	0.18	-0.4
2,925,982	-		AO356_12850	0.18	+0.6
2,926,029	+		AO356_12850	0.26	+0.2
2,926,029	+		AO356_12850	0.26	+0.3
2,926,030	-		AO356_12850	0.26	+1.0
2,926,077	+		AO356_12850	0.34	+0.1
2,926,078	-		AO356_12850	0.34	-0.2
2,926,078	-		AO356_12850	0.34	+0.4
2,926,078	-		AO356_12850	0.34	-1.7
2,926,078	-		AO356_12850	0.34	-0.7
2,926,078	-		AO356_12850	0.34	+1.3
2,926,212	+		AO356_12850	0.57	-0.1
2,926,212	+		AO356_12850	0.57	-0.8
2,926,212	+		AO356_12850	0.57	+0.3
2,926,212	+		AO356_12850	0.57	-0.2
2,926,212	+		AO356_12850	0.57	-0.6
2,926,212	+		AO356_12850	0.57	+1.1
2,926,212	+		AO356_12850	0.57	+0.6
2,926,212	+		AO356_12850	0.57	-1.1
2,926,213	-		AO356_12850	0.57	-0.2
2,926,213	-		AO356_12850	0.57	+0.8
2,926,213	-		AO356_12850	0.57	+0.3
2,926,239	+		AO356_12850	0.61	+0.2
2,926,239	+		AO356_12850	0.61	+1.4
2,926,239	+		AO356_12850	0.61	-0.4
2,926,239	+		AO356_12850	0.61	+0.8
2,926,239	+		AO356_12850	0.61	-0.1
2,926,239	+		AO356_12850	0.61	-0.1
2,926,240	-		AO356_12850	0.62	-0.2
2,926,240	-		AO356_12850	0.62	-0.4
2,926,240	-		AO356_12850	0.62	-0.3
2,926,240	-		AO356_12850	0.62	-0.2
2,926,240	-		AO356_12850	0.62	-1.3
2,926,371	+		AO356_12850	0.84	+0.8
2,926,372	-		AO356_12850	0.84	+0.5
2,926,372	-		AO356_12850	0.84	-0.7
2,926,372	-		AO356_12850	0.84	+1.2
2,926,372	-		AO356_12850	0.84	+0.1
2,926,457	+				+0.2
2,926,458	-				+0.7
2,926,458	-				+0.4
2,926,458	-				-1.7
2,926,458	-				-0.0
2,926,467	+				+0.3
2,926,467	+				-0.1
2,926,467	+				+0.1
2,926,467	+				+1.3
2,926,467	+				-1.1
2,926,467	+				+0.1
2,926,467	+				-0.9
2,926,467	+				-0.6
2,926,467	+				+1.0
2,926,467	+				-0.3
2,926,467	+				-0.7
2,926,467	+				+0.4
2,926,467	+				+0.3
2,926,467	+				-1.5
2,926,467	+				-0.4
2,926,467	+				-0.6
2,926,467	+				+0.5
2,926,467	+				-0.2
2,926,467	+				+0.6
2,926,468	-				-0.1
2,926,468	-				+0.9
2,926,468	-				-0.9
2,926,468	-				-0.3
2,926,468	-				+0.2
2,926,468	-				+0.2
2,926,468	-				+0.4
2,926,468	-				+0.0
2,926,468	-				+0.0
2,926,621	+				+1.4
2,926,774	+		AO356_12855	0.41	-0.5
2,926,774	+		AO356_12855	0.41	+0.3
2,926,775	-		AO356_12855	0.42	+0.4
2,926,775	-		AO356_12855	0.42	-0.8
2,926,775	-		AO356_12855	0.42	+0.5
2,926,777	+		AO356_12855	0.42	+0.2
2,926,777	+		AO356_12855	0.42	-0.6
2,926,777	+		AO356_12855	0.42	-1.9
2,926,777	+		AO356_12855	0.42	-0.8
2,926,777	+		AO356_12855	0.42	+0.1
2,926,777	+		AO356_12855	0.42	+1.1
2,926,778	-		AO356_12855	0.42	-0.1
2,926,778	-		AO356_12855	0.42	-0.6
2,926,778	-		AO356_12855	0.42	-0.4
2,926,778	-		AO356_12855	0.42	+0.1
2,926,778	-		AO356_12855	0.42	+0.1
2,926,795	+		AO356_12855	0.47	+0.4
2,926,795	+		AO356_12855	0.47	-0.1
2,926,795	+		AO356_12855	0.47	-0.6
2,926,795	+		AO356_12855	0.47	-0.2
2,926,795	+		AO356_12855	0.47	+0.2
2,926,796	-		AO356_12855	0.47	-0.4
2,926,796	-		AO356_12855	0.47	-0.4
2,926,796	-		AO356_12855	0.47	-0.6
2,926,796	-		AO356_12855	0.47	+0.7
2,926,796	-		AO356_12855	0.47	+0.3
2,926,796	-		AO356_12855	0.47	+0.4
2,926,796	-		AO356_12855	0.47	-0.2
2,926,796	-		AO356_12855	0.47	-0.1
2,926,831	+		AO356_12855	0.57	+0.2
2,926,831	+		AO356_12855	0.57	+0.5
2,926,831	+		AO356_12855	0.57	+0.1
2,926,832	-		AO356_12855	0.57	+0.5
2,926,983	+				+0.3
2,927,011	+				+0.4
2,927,011	+				-0.4
2,927,011	+				-0.4
2,927,012	-				-0.1
2,927,012	-				+0.7
2,927,012	-				-0.2
2,927,012	-				+0.2
2,927,012	-				+0.5
2,927,119	+				-0.2
2,927,221	+		AO356_12860	0.15	+0.4
2,927,221	+		AO356_12860	0.15	+0.4
2,927,221	+		AO356_12860	0.15	+0.4
2,927,743	+		AO356_12860	0.53	+0.4
2,927,761	+		AO356_12860	0.54	+0.2
2,927,762	-		AO356_12860	0.54	-0.9
2,927,762	-		AO356_12860	0.54	-0.5
2,927,762	-		AO356_12860	0.54	+0.4
2,927,762	-		AO356_12860	0.54	+0.3
2,927,782	+		AO356_12860	0.55	+0.5
2,927,783	-		AO356_12860	0.55	-1.2
2,927,851	+		AO356_12860	0.60	+0.2
2,927,851	+		AO356_12860	0.60	+1.5
2,927,851	+		AO356_12860	0.60	-0.3
2,927,851	+		AO356_12860	0.60	-0.9
2,927,899	+		AO356_12860	0.64	+0.2
2,927,899	+		AO356_12860	0.64	+1.3
2,927,899	+		AO356_12860	0.64	-0.1
2,927,900	-		AO356_12860	0.64	+0.8
2,927,900	-		AO356_12860	0.64	-0.9
2,927,900	-		AO356_12860	0.64	+0.4
2,927,900	-		AO356_12860	0.64	+1.1
2,927,900	-		AO356_12860	0.64	-0.3
2,927,900	-		AO356_12860	0.64	-0.2