Experiment: Fusidic 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0281 and Shew_0282 are separated by 24 nucleotides Shew_0282 and Shew_0283 are separated by 115 nucleotides
Shew_0281: Shew_0281 - phospholipid/glycerol acyltransferase (RefSeq), at 298,344 to 299,291
_0281
Shew_0282: Shew_0282 - phospholipid/glycerol acyltransferase (RefSeq), at 299,316 to 300,200
_0282
Shew_0283: Shew_0283 - Mg chelatase, subunit ChlI (RefSeq), at 300,316 to 301,836
_0283
Position (kb) 299
300
301 Strain fitness (log2 ratio) -1
0
1
2 at 298.618 kb on - strand, within Shew_0281 at 298.697 kb on + strand, within Shew_0281 at 298.767 kb on + strand, within Shew_0281 at 298.777 kb on + strand, within Shew_0281 at 298.777 kb on + strand, within Shew_0281 at 298.855 kb on + strand, within Shew_0281 at 298.978 kb on - strand, within Shew_0281 at 299.205 kb on + strand at 299.260 kb on + strand at 299.312 kb on - strand at 299.604 kb on - strand, within Shew_0282 at 299.796 kb on + strand, within Shew_0282 at 299.825 kb on - strand, within Shew_0282 at 300.258 kb on + strand at 300.289 kb on - strand at 300.323 kb on + strand at 300.416 kb on - strand at 300.527 kb on - strand, within Shew_0283 at 300.552 kb on + strand, within Shew_0283 at 300.552 kb on + strand, within Shew_0283 at 300.963 kb on - strand, within Shew_0283 at 301.014 kb on + strand, within Shew_0283 at 301.022 kb on - strand, within Shew_0283
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.03125 mg/ml remove 298,618 - Shew_0281 0.29 -0.8 298,697 + Shew_0281 0.37 -0.9 298,767 + Shew_0281 0.45 -0.5 298,777 + Shew_0281 0.46 -0.6 298,777 + Shew_0281 0.46 +1.4 298,855 + Shew_0281 0.54 -0.4 298,978 - Shew_0281 0.67 -0.4 299,205 + -0.3 299,260 + -0.6 299,312 - +0.2 299,604 - Shew_0282 0.33 -0.6 299,796 + Shew_0282 0.54 -0.9 299,825 - Shew_0282 0.58 -0.8 300,258 + -0.0 300,289 - +1.8 300,323 + +0.1 300,416 - -0.0 300,527 - Shew_0283 0.14 +0.0 300,552 + Shew_0283 0.16 -0.0 300,552 + Shew_0283 0.16 +0.1 300,963 - Shew_0283 0.43 -0.0 301,014 + Shew_0283 0.46 -0.0 301,022 - Shew_0283 0.46 +0.1
Or see this region's nucleotide sequence