Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3592

Experiment: Glucuronamide (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucuronamide (N)
3,782,111	+		Dshi_3591	0.64	-1.0
3,782,118	+		Dshi_3591	0.65	-0.3
3,782,236	-		Dshi_3591	0.72	-1.3
3,782,294	-		Dshi_3591	0.75	-1.0
3,782,315	+		Dshi_3591	0.76	+0.1
3,782,365	+		Dshi_3591	0.79	-0.3
3,782,405	+		Dshi_3591	0.82	+0.7
3,782,578	+				-0.3
3,782,582	-				+1.3
3,782,586	-				+0.3
3,782,606	-				-0.6
3,782,614	+				+0.3
3,782,614	+				+0.3
3,782,614	+				+0.4
3,782,619	+				+1.1
3,782,622	-				+0.0
3,782,624	+				+0.3
3,782,624	+				-1.7
3,782,632	-				+0.6
3,782,632	-				-0.2
3,782,632	-				-0.7
3,782,632	-				-0.7
3,782,632	-				+0.8
3,782,664	+				-0.4
3,782,678	-				-0.7
3,782,683	+				-1.1
3,782,721	+				+1.7
3,782,758	+				-2.6
3,782,766	-				-0.1
3,782,766	-				+1.3
3,782,796	-				-2.0
3,782,800	+				+0.4
3,782,864	-				+1.0
3,782,866	+				+0.3
3,782,866	+				+1.0
3,782,874	-				-0.1
3,782,874	-				-1.1
3,782,874	-				+1.0
3,782,883	-				+0.8
3,782,913	+				-0.2
3,782,921	+				+0.0
3,782,921	+				-0.9
3,782,929	-				+0.3
3,783,059	+				-0.6
3,783,067	-				+0.8
3,783,073	+				-0.3
3,783,077	-				-0.6
3,783,101	-				-0.4
3,783,103	+				+0.3
3,783,157	-				-0.7
3,783,157	-				-0.4
3,783,157	-				+0.2
3,783,208	-				-1.0
3,783,230	-				+0.4
3,783,265	+				-0.2
3,783,265	+				+1.1
3,783,273	-				+0.3
3,783,273	-				+0.0
3,783,352	-				+1.2
3,783,352	-				-0.1
3,783,438	+				-1.5
3,783,446	-				-0.3
3,783,469	-				+0.1
3,783,480	-				-0.7
3,783,521	-				+0.4
3,783,565	+				+0.3
3,783,587	+				+1.4
3,783,597	-				-1.2
3,783,608	+				-0.1
3,783,610	+				+0.9
3,783,610	+				-1.2
3,783,610	+				+0.6
3,783,610	+				-0.2
3,783,610	+				-1.6
3,783,610	+				+0.5
3,783,618	-				-0.9
3,783,618	-				-1.7
3,783,618	-				+0.5
3,783,618	-				+2.0
3,783,675	+		Dshi_3592	0.11	+0.4
3,783,774	-		Dshi_3592	0.13	-1.6
3,783,907	+		Dshi_3592	0.16	-0.6
3,783,931	-		Dshi_3592	0.16	-0.7
3,784,001	-		Dshi_3592	0.17	+0.9
3,784,213	-		Dshi_3592	0.21	-0.3
3,784,252	+		Dshi_3592	0.22	+0.6
3,784,260	-		Dshi_3592	0.22	-0.0
3,784,297	-		Dshi_3592	0.23	+0.0
3,784,372	+		Dshi_3592	0.24	+0.7
3,784,377	+		Dshi_3592	0.25	-0.7
3,784,385	-		Dshi_3592	0.25	-0.3
3,784,518	-		Dshi_3592	0.27	+0.5
3,784,549	-		Dshi_3592	0.28	+0.6
3,784,710	+		Dshi_3592	0.31	+0.5
3,784,806	-		Dshi_3592	0.33	+1.3
3,784,818	+		Dshi_3592	0.33	+0.7
3,784,887	-		Dshi_3592	0.34	-0.4
3,784,977	+		Dshi_3592	0.36	-0.6
3,785,104	-		Dshi_3592	0.39	-1.1
3,785,114	-				+1.3
3,785,120	-		Dshi_3592	0.39	+0.5
3,785,157	-		Dshi_3592	0.40	-0.9
3,785,172	-		Dshi_3592	0.40	+0.2
3,785,180	-		Dshi_3592	0.40	-0.4
3,785,204	-		Dshi_3592	0.41	+0.5
3,785,253	-		Dshi_3592	0.41	+0.2
3,785,276	+		Dshi_3592	0.42	-0.0
3,785,322	-		Dshi_3592	0.43	+0.4
3,785,343	+		Dshi_3592	0.43	-0.2
3,785,447	-		Dshi_3592	0.45	+0.5
3,785,447	-		Dshi_3592	0.45	+0.7
3,785,486	-		Dshi_3592	0.46	-0.7
3,785,593	-		Dshi_3592	0.48	-0.3
3,785,622	+		Dshi_3592	0.49	-1.1
3,785,691	+		Dshi_3592	0.50	+1.6
3,785,713	+		Dshi_3592	0.50	+1.3
3,785,721	-		Dshi_3592	0.51	+0.3
3,785,725	-		Dshi_3592	0.51	-0.7
3,785,731	-		Dshi_3592	0.51	-0.4
3,785,766	-		Dshi_3592	0.51	+0.3
3,785,989	-		Dshi_3592	0.56	-0.6
3,786,011	+		Dshi_3592	0.56	-0.1
3,786,209	+		Dshi_3592	0.60	-1.3
3,786,236	-		Dshi_3592	0.60	-1.7
3,786,285	-		Dshi_3592	0.61	+0.4
3,786,307	+		Dshi_3592	0.62	+0.8
3,786,307	+		Dshi_3592	0.62	-0.0
3,786,317	+		Dshi_3592	0.62	+0.5
3,786,382	-		Dshi_3592	0.63	-0.5
3,786,390	+		Dshi_3592	0.63	+0.5
3,786,398	-		Dshi_3592	0.64	+0.3
3,786,496	+		Dshi_3592	0.65	-0.1
3,786,499	-		Dshi_3592	0.66	-0.1
3,786,525	-		Dshi_3592	0.66	+0.4
3,786,592	+		Dshi_3592	0.67	-0.1
3,786,612	-		Dshi_3592	0.68	+0.6
3,786,681	-		Dshi_3592	0.69	+0.3
3,786,735	+		Dshi_3592	0.70	+0.6
3,786,735	+		Dshi_3592	0.70	-0.7
3,786,735	+		Dshi_3592	0.70	-0.4
3,786,766	+		Dshi_3592	0.71	+1.4
3,786,782	-		Dshi_3592	0.71	-0.3
3,786,835	+		Dshi_3592	0.72	+1.5
3,786,835	+		Dshi_3592	0.72	-1.7
3,786,843	-		Dshi_3592	0.72	-0.3
3,786,851	+		Dshi_3592	0.72	-1.2
3,786,853	-		Dshi_3592	0.72	-0.1
3,786,853	-		Dshi_3592	0.72	-0.1
3,786,866	+		Dshi_3592	0.73	+0.1
3,786,910	+		Dshi_3592	0.73	-1.6
3,786,923	+		Dshi_3592	0.74	-0.2
3,786,935	+		Dshi_3592	0.74	-1.1
3,786,935	+		Dshi_3592	0.74	+0.3
3,786,935	+		Dshi_3592	0.74	+0.1
3,786,935	+		Dshi_3592	0.74	+0.2
3,786,935	+		Dshi_3592	0.74	+0.2
3,786,943	-		Dshi_3592	0.74	+0.6
3,786,943	-		Dshi_3592	0.74	+0.5
3,786,943	-		Dshi_3592	0.74	-0.7
3,786,946	+		Dshi_3592	0.74	-1.9
3,786,953	+		Dshi_3592	0.74	-0.1
3,787,000	+		Dshi_3592	0.75	+0.3
3,787,008	-		Dshi_3592	0.75	+0.0
3,787,106	+		Dshi_3592	0.77	+2.0
3,787,113	-		Dshi_3592	0.77	+1.7
3,787,113	-		Dshi_3592	0.77	-1.3
3,787,117	+		Dshi_3592	0.77	+0.3
3,787,119	-		Dshi_3592	0.77	+0.9
3,787,124	+		Dshi_3592	0.78	-0.6
3,787,172	+		Dshi_3592	0.79	-1.6
3,787,180	-		Dshi_3592	0.79	+0.4
3,787,188	-		Dshi_3592	0.79	-0.3
3,787,225	+		Dshi_3592	0.80	-0.7
3,787,241	-		Dshi_3592	0.80	-0.6
3,787,306	-		Dshi_3592	0.81	-0.9
3,787,403	+		Dshi_3592	0.83	+0.2
3,787,408	+		Dshi_3592	0.83	+1.1
3,787,418	+		Dshi_3592	0.83	+0.8
3,787,483	+		Dshi_3592	0.85	-0.9
3,787,513	-		Dshi_3592	0.85	-0.1
3,787,523	-		Dshi_3592	0.85	-0.8
3,787,586	+		Dshi_3592	0.86	-2.0
3,787,589	-		Dshi_3592	0.87	-1.9
3,787,594	+		Dshi_3592	0.87	+0.8
3,787,614	+		Dshi_3592	0.87	+1.3
3,787,622	+		Dshi_3592	0.87	+0.3
3,787,629	-		Dshi_3592	0.87	-0.0
3,787,656	+		Dshi_3592	0.88	-0.3
3,787,670	+		Dshi_3592	0.88	+0.2
3,787,670	+		Dshi_3592	0.88	-0.5
3,787,670	+		Dshi_3592	0.88	-1.4
3,787,670	+		Dshi_3592	0.88	+0.1
3,787,678	-		Dshi_3592	0.88	+0.5
3,787,678	-		Dshi_3592	0.88	-0.6
3,787,678	-		Dshi_3592	0.88	+0.2
3,787,685	-		Dshi_3592	0.88	+0.2
3,787,724	+		Dshi_3592	0.89	-0.3
3,787,737	-		Dshi_3592	0.89	+0.1
3,787,752	+		Dshi_3592	0.90	+1.6
3,787,752	+		Dshi_3592	0.90	-0.3
3,787,752	+		Dshi_3592	0.90	+0.8
3,787,780	-				+0.2
3,787,796	-				+2.6
3,787,826	-				-1.1
3,787,877	+				-2.1
3,787,894	+				-1.3
3,787,895	-				+0.0
3,787,898	-				+0.3
3,787,915	-				-0.2
3,787,934	+				+0.6
3,787,956	+				+0.3
3,787,962	+				+0.1
3,787,984	+				+0.3
3,788,000	+				-0.8
3,788,010	+				-0.8
3,788,069	+				-0.8
3,788,069	+				+1.3
3,788,069	+				+0.7
3,788,069	+				+0.2
3,788,077	-				+0.3
3,788,077	-				+0.3
3,788,079	+				+1.3
3,788,079	+				+0.7
3,788,086	+				-0.3
3,788,116	+				-1.0
3,788,124	-				-0.6
3,788,124	-				-0.2
3,788,208	+				-0.9
3,788,208	+				-0.2
3,788,215	+				-0.9
3,788,215	-				-0.8
3,788,217	+				-0.4
3,788,278	-				+1.5
3,788,278	-				+0.5
3,788,287	+				-0.2
3,788,292	+				-0.3
3,788,296	-				-0.9
3,788,299	+				-0.1
3,788,299	+				+1.4
3,788,299	+				+2.3
3,788,299	+				-0.6
3,788,299	+				-3.1
3,788,299	+				+0.3
3,788,299	+				-0.2
3,788,299	+				-2.0
3,788,299	+				-0.4
3,788,299	+				-0.7
3,788,299	+				+0.4
3,788,299	+				+0.9
3,788,299	+				+0.8
3,788,299	+				-0.0
3,788,299	+				-0.2
3,788,299	+				-0.9
3,788,299	+				+0.4
3,788,299	+				-0.3
3,788,299	+				+0.9
3,788,299	+				-0.0
3,788,299	+				+0.3
3,788,299	+				-0.3
3,788,299	+				-0.5
3,788,299	+				-0.3
3,788,299	+				+0.7
3,788,299	+				-0.3
3,788,299	+				-0.6
3,788,299	+				-0.5
3,788,299	+				-0.1
3,788,299	+				+0.1
3,788,299	+				+2.0
3,788,299	+				+0.9
3,788,299	+				+0.1
3,788,299	+				+0.7
3,788,299	+				-0.0
3,788,299	+				-1.3
3,788,299	+				+0.3
3,788,299	+				-0.7
3,788,299	+				-0.2
3,788,299	+				+0.5
3,788,299	+				+0.0
3,788,299	+				-0.4
3,788,299	+				-0.7
3,788,299	+				+1.8
3,788,299	+				+0.2
3,788,299	+				+1.0
3,788,299	+				+1.3
3,788,299	+				-0.2
3,788,299	+				-0.1
3,788,299	+				-0.1
3,788,299	+				-2.3
3,788,299	+				-0.9
3,788,299	+				-0.5
3,788,299	+				-0.5
3,788,299	+				+0.2
3,788,299	+				-2.1
3,788,299	+				+0.1
3,788,299	+				-0.3
3,788,299	+				+1.7
3,788,299	+				-0.7
3,788,299	+				-0.6
3,788,299	+				-0.3
3,788,299	+				-0.6
3,788,299	+				+0.3
3,788,299	+				-0.6
3,788,299	+				-0.9
3,788,299	+				-1.6
3,788,299	+				+1.1
3,788,299	+				-0.2
3,788,299	+				+0.1
3,788,300	-				-0.3
3,788,305	-				-0.6
3,788,307	-				+1.1
3,788,307	-				-0.1
3,788,307	-				+0.2
3,788,307	-				-0.3
3,788,307	-				-0.2
3,788,307	-				+0.1
3,788,307	-				+0.3
3,788,307	-				+0.3
3,788,307	-				+1.7
3,788,307	-				+0.9
3,788,307	-				+0.4
3,788,307	-				+0.4
3,788,307	-				-1.6
3,788,307	-				+0.3
3,788,307	-				+0.0
3,788,307	-				-1.0
3,788,307	-				+1.3
3,788,307	-				-0.9
3,788,307	-				+1.3
3,788,307	-				-0.3
3,788,307	-				+0.4
3,788,307	-				+0.1
3,788,307	-				-0.3
3,788,307	-				-0.6
3,788,307	-				-0.7
3,788,307	-				-0.6
3,788,307	-				+1.3
3,788,307	-				+0.6
3,788,307	-				-0.1
3,788,307	-				-0.7
3,788,307	-				-0.4
3,788,307	-				+1.6
3,788,307	-				-1.7
3,788,307	-				-0.1
3,788,307	-				+0.7
3,788,307	-				+0.0
3,788,307	-				-0.5
3,788,307	-				-0.0
3,788,307	-				-1.0
3,788,307	-				+0.1
3,788,307	-				+1.1
3,788,307	-				+0.0
3,788,307	-				+0.9
3,788,307	-				+1.4
3,788,307	-				-0.1
3,788,307	-				-2.6
3,788,307	-				-0.3
3,788,307	-				-0.7
3,788,307	-				+1.1
3,788,307	-				-0.0
3,788,307	-				+0.4
3,788,307	-				+1.1
3,788,307	-				+0.0
3,788,307	-				+1.1
3,788,307	-				-0.2
3,788,307	-				+0.0
3,788,307	-				+1.2
3,788,307	-				-0.5
3,788,307	-				+0.5
3,788,307	-				+1.1
3,788,307	-				-0.7
3,788,307	-				+0.6
3,788,307	-				-0.6
3,788,307	-				+0.6
3,788,307	-				-0.4
3,788,307	-				-0.3
3,788,307	-				-0.1
3,788,307	-				-0.1
3,788,307	-				+1.7
3,788,307	-				-0.1
3,788,307	-				+1.1
3,788,307	-				-0.2
3,788,307	-				+0.1
3,788,307	-				+2.3
3,788,307	-				-0.2
3,788,307	-				+0.0
3,788,307	-				-0.1
3,788,307	-				+0.4
3,788,307	-				+1.1
3,788,307	-				-2.6
3,788,307	-				+0.1
3,788,307	-				-0.2
3,788,307	-				-1.2
3,788,307	-				-0.9
3,788,307	-				-0.9
3,788,307	-				+0.1
3,788,307	-				-0.0
3,788,307	-				+0.1
3,788,307	-				+0.1
3,788,307	-				-1.5
3,788,307	-				-0.5
3,788,307	-				-0.4
3,788,307	-				+0.3
3,788,309	+				-0.1
3,788,309	+				+1.0
3,788,309	+				-0.1
3,788,309	+				+0.8
3,788,317	-				+0.6
3,788,322	+				+0.3
3,788,322	+				+1.8
3,788,330	-				+0.4
3,788,330	-				-1.4
3,788,351	+				+0.4
3,788,354	-				+1.3
3,788,358	+				-1.2
3,788,358	+				-0.5
3,788,366	-				-0.7
3,788,366	-				-0.1
3,788,366	-				-0.2
3,788,396	-				-0.3
3,788,408	-				-0.7
3,788,408	-				-0.9
3,788,408	-				+0.7
3,788,408	-				-0.8
3,788,414	-				-0.6
3,788,415	+				+0.5
3,788,415	+				+1.7
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