Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2105

Experiment: Glucuronamide (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucuronamide (N)
2,230,744	+				-0.7
2,230,754	+				-0.5
2,230,754	+				-1.4
2,230,759	+				+0.3
2,230,775	+				-0.4
2,230,783	-				-0.0
2,230,785	-				+0.5
2,230,796	+				+1.1
2,230,838	+		Dshi_2105	0.16	+0.2
2,230,885	-		Dshi_2105	0.22	+0.0
2,230,890	+		Dshi_2105	0.23	+0.2
2,230,908	+		Dshi_2105	0.26	+0.1
2,230,913	+		Dshi_2105	0.27	+0.3
2,230,941	+		Dshi_2105	0.31	+0.4
2,230,941	+		Dshi_2105	0.31	-2.5
2,230,941	+		Dshi_2105	0.31	-0.7
2,230,941	+		Dshi_2105	0.31	-0.4
2,230,941	+		Dshi_2105	0.31	-1.6
2,230,941	+		Dshi_2105	0.31	-0.4
2,230,941	+		Dshi_2105	0.31	-0.9
2,230,941	+		Dshi_2105	0.31	+0.2
2,230,941	+		Dshi_2105	0.31	+0.2
2,230,943	+		Dshi_2105	0.31	+0.4
2,230,943	+		Dshi_2105	0.31	+0.1
2,230,943	+		Dshi_2105	0.31	-0.0
2,230,943	+		Dshi_2105	0.31	-0.4
2,230,943	+		Dshi_2105	0.31	+1.1
2,230,943	+		Dshi_2105	0.31	-0.9
2,230,943	+		Dshi_2105	0.31	-0.9
2,230,943	+		Dshi_2105	0.31	+0.1
2,230,943	+		Dshi_2105	0.31	-1.3
2,230,943	+		Dshi_2105	0.31	-0.3
2,230,943	+		Dshi_2105	0.31	-0.3
2,230,943	+		Dshi_2105	0.31	-1.0
2,230,943	+		Dshi_2105	0.31	-0.2
2,230,948	+		Dshi_2105	0.32	+1.0
2,230,949	-		Dshi_2105	0.32	+0.7
2,230,949	-		Dshi_2105	0.32	+0.9
2,230,949	-		Dshi_2105	0.32	+0.4
2,230,949	-		Dshi_2105	0.32	+0.1
2,230,949	-		Dshi_2105	0.32	+0.6
2,230,949	-		Dshi_2105	0.32	-0.3
2,230,949	-		Dshi_2105	0.32	+0.2
2,230,949	-		Dshi_2105	0.32	-0.0
2,230,949	-		Dshi_2105	0.32	-0.3
2,230,949	-		Dshi_2105	0.32	-0.3
2,230,949	-		Dshi_2105	0.32	+0.7
2,230,949	-		Dshi_2105	0.32	+0.2
2,230,949	-		Dshi_2105	0.32	+0.0
2,230,951	-		Dshi_2105	0.32	+0.6
2,230,951	-		Dshi_2105	0.32	+0.5
2,230,951	-		Dshi_2105	0.32	+0.7
2,230,956	+		Dshi_2105	0.33	+0.3
2,230,956	+		Dshi_2105	0.33	-0.2
2,230,956	+		Dshi_2105	0.33	+0.5
2,230,956	-		Dshi_2105	0.33	-0.7
2,230,956	-		Dshi_2105	0.33	-0.7
2,230,956	-		Dshi_2105	0.33	+1.6
2,230,964	+		Dshi_2105	0.34	+0.0
2,230,964	-		Dshi_2105	0.34	+2.7
2,230,979	+		Dshi_2105	0.36	+0.1
2,230,989	+		Dshi_2105	0.38	-0.2
2,230,991	+		Dshi_2105	0.38	+1.8
2,230,993	+		Dshi_2105	0.38	-0.1
2,230,999	-		Dshi_2105	0.39	-0.9
2,231,030	+		Dshi_2105	0.44	-1.9
2,231,030	+		Dshi_2105	0.44	-0.5
2,231,030	+		Dshi_2105	0.44	+0.4
2,231,030	+		Dshi_2105	0.44	+0.6
2,231,035	+		Dshi_2105	0.44	+0.0
2,231,035	+		Dshi_2105	0.44	-1.3
2,231,038	-		Dshi_2105	0.45	-0.3
2,231,038	-		Dshi_2105	0.45	-1.1
2,231,038	-		Dshi_2105	0.45	+0.1
2,231,040	+		Dshi_2105	0.45	+0.8
2,231,044	+		Dshi_2105	0.46	-0.3
2,231,045	+		Dshi_2105	0.46	-0.1
2,231,045	+		Dshi_2105	0.46	-1.2
2,231,045	+		Dshi_2105	0.46	-0.8
2,231,045	+		Dshi_2105	0.46	-0.6
2,231,048	-		Dshi_2105	0.46	+0.0
2,231,053	-		Dshi_2105	0.47	+0.5
2,231,053	-		Dshi_2105	0.47	-1.4
2,231,053	-		Dshi_2105	0.47	+0.2
2,231,054	-		Dshi_2105	0.47	+0.3
2,231,083	+		Dshi_2105	0.52	+0.5
2,231,085	-		Dshi_2105	0.52	+0.4
2,231,091	-		Dshi_2105	0.53	-1.5
2,231,106	-		Dshi_2105	0.55	-0.0
2,231,125	+		Dshi_2105	0.58	-0.2
2,231,177	+		Dshi_2105	0.65	-0.4
2,231,212	+		Dshi_2105	0.70	-1.0
2,231,218	-		Dshi_2105	0.71	-0.6
2,231,227	+		Dshi_2105	0.73	-0.7
2,231,251	+		Dshi_2105	0.76	+0.3
2,231,268	+		Dshi_2105	0.79	+1.4
2,231,268	+		Dshi_2105	0.79	+0.4
2,231,276	-		Dshi_2105	0.80	-0.2
2,231,299	+		Dshi_2105	0.83	+1.5
2,231,304	+		Dshi_2105	0.84	-0.2
2,231,304	+		Dshi_2105	0.84	-0.2
2,231,304	+		Dshi_2105	0.84	-0.2
2,231,304	+		Dshi_2105	0.84	+0.1
2,231,312	-		Dshi_2105	0.85	-1.0
2,231,312	-		Dshi_2105	0.85	-0.1
2,231,375	+				-0.6
2,231,377	-				+0.4
2,231,380	+				-0.2
2,231,383	-				+1.0
2,231,383	-				+1.0
2,231,385	+				+0.0
2,231,388	-				+1.1
2,231,388	-				-0.1
2,231,388	-				-0.6
2,231,389	+				+0.6
2,231,403	+				+0.3
2,231,418	+				-0.3
2,231,426	-				+0.3
2,231,430	+				-0.3
2,231,430	+				-0.7
2,231,436	+				+0.1
2,231,445	-				-0.3
2,231,504	+				-0.6
2,231,534	+				-0.2
2,231,534	+				-0.1
2,231,534	+				+0.2
2,231,534	+				-0.3
2,231,534	+				+0.1
2,231,534	+				-1.2
2,231,542	-				-0.6
2,231,568	+				-0.5
2,231,576	-				-0.2
2,231,581	+				-0.6
2,231,581	+				-0.0
2,231,589	-				+1.0
2,231,681	+				-0.3
2,231,681	+				+0.7
2,231,681	+				-0.7
2,231,686	+				+0.2
2,231,686	+				-0.8
2,231,689	-				+0.8
2,231,689	-				-0.5
2,231,689	-				+0.3
2,231,725	-				-0.7
2,231,734	-				+0.3
2,231,780	+		Dshi_2106	0.11	-0.0
2,231,780	-		Dshi_2106	0.11	+0.6
2,231,799	-		Dshi_2106	0.18	-0.2
2,231,819	-		Dshi_2106	0.26	-2.3
2,231,847	+		Dshi_2106	0.37	-0.8
2,231,847	+		Dshi_2106	0.37	-0.6
2,231,855	-		Dshi_2106	0.40	-0.5
2,231,855	-		Dshi_2106	0.40	-1.5
2,231,855	-		Dshi_2106	0.40	-1.2
2,231,855	-		Dshi_2106	0.40	+1.7
2,231,865	-		Dshi_2106	0.44	-1.1
2,231,902	-		Dshi_2106	0.59	+0.2
2,231,934	-		Dshi_2106	0.71	-0.3
2,231,942	+		Dshi_2106	0.75	-0.1
2,231,950	-				-0.5
2,231,964	+		Dshi_2106	0.83	+0.6
2,231,977	-		Dshi_2106	0.88	-1.3
2,231,977	-		Dshi_2106	0.88	+0.4
2,231,977	-		Dshi_2106	0.88	-2.8
2,231,977	-		Dshi_2106	0.88	-0.8
2,231,978	-		Dshi_2106	0.89	-0.6
2,231,979	+		Dshi_2106	0.89	-0.1
2,231,987	-				-0.0
2,231,987	-				+0.9
2,231,989	+				-0.5
2,231,995	-				-1.0
2,232,001	+				-0.5
2,232,003	-				+0.1
2,232,004	-				-2.0
2,232,004	-				-0.9
2,232,009	-				-0.4
2,232,014	-				+0.9
2,232,015	-				+0.0
2,232,025	+				+0.1
2,232,033	-				-0.4
2,232,033	-				-0.5
2,232,033	-				-0.6
2,232,038	+				+0.1
2,232,052	-				+0.3
2,232,057	-				-1.1
2,232,057	-				-0.2
2,232,083	+				-2.0
2,232,083	+				+1.9
2,232,083	+				-0.3
2,232,090	+				+1.0
2,232,091	+				+0.3
2,232,091	-				-0.3
2,232,091	-				-0.5
2,232,091	-				-0.0
2,232,091	-				-0.1
2,232,091	-				+0.3
2,232,091	-				+0.0
2,232,091	-				+0.9
2,232,091	-				-0.4
2,232,091	-				+0.4
2,232,099	-				-0.5
2,232,099	-				-0.0
2,232,100	+				+0.1
2,232,108	-				-0.5
2,232,108	-				+1.1
2,232,114	+				-1.2
2,232,114	+				-0.4
2,232,116	-				+0.4
2,232,122	-				-0.3
2,232,122	-				+0.6
2,232,122	-				+0.6
2,232,122	-				-0.5
2,232,133	+				+0.8
2,232,141	-				+0.6
2,232,143	+				-0.3
2,232,153	-				+0.5
2,232,156	-				+1.3
2,232,158	+				-0.8
2,232,158	-				-1.1
2,232,158	-				-0.1
2,232,166	+				-1.0
2,232,171	+				+0.2
2,232,174	-				-0.5
2,232,174	-				+0.3
2,232,189	+				+0.8
2,232,199	-				-0.1
2,232,199	-				+0.2
2,232,204	-		Dshi_2107	0.10	+1.5
2,232,211	-		Dshi_2107	0.11	-0.5
2,232,237	+		Dshi_2107	0.15	+0.1
2,232,237	+		Dshi_2107	0.15	-0.2
2,232,240	-		Dshi_2107	0.15	+1.2
2,232,242	+		Dshi_2107	0.16	-0.6
2,232,242	-		Dshi_2107	0.16	+0.7
2,232,247	-		Dshi_2107	0.16	-0.9
2,232,254	-		Dshi_2107	0.17	-0.9
2,232,267	+		Dshi_2107	0.19	-2.9
2,232,267	+		Dshi_2107	0.19	-0.4
2,232,267	+		Dshi_2107	0.19	+0.3
2,232,267	+		Dshi_2107	0.19	-0.1
2,232,267	+		Dshi_2107	0.19	-0.0
2,232,267	+		Dshi_2107	0.19	-1.7
2,232,275	-		Dshi_2107	0.20	-1.1
2,232,275	-		Dshi_2107	0.20	-0.1
2,232,275	-		Dshi_2107	0.20	-3.0
2,232,282	+		Dshi_2107	0.21	+0.1
2,232,285	-		Dshi_2107	0.22	+0.1
2,232,285	-		Dshi_2107	0.22	+0.3
2,232,285	-		Dshi_2107	0.22	-0.6
2,232,290	-		Dshi_2107	0.22	+1.4
2,232,302	-		Dshi_2107	0.24	-0.5
2,232,302	-		Dshi_2107	0.24	-0.0
2,232,302	-		Dshi_2107	0.24	+1.2
2,232,307	+		Dshi_2107	0.25	-0.1
2,232,330	-		Dshi_2107	0.28	-1.3
2,232,339	+		Dshi_2107	0.29	-0.4
2,232,342	-		Dshi_2107	0.30	-0.3
2,232,347	-		Dshi_2107	0.31	-0.0
2,232,357	+		Dshi_2107	0.32	-0.6
2,232,359	-		Dshi_2107	0.32	-0.2
2,232,373	-		Dshi_2107	0.34	+0.2
2,232,375	+		Dshi_2107	0.35	+0.1
2,232,380	+		Dshi_2107	0.35	-0.5
2,232,380	+		Dshi_2107	0.35	-0.6
2,232,380	+		Dshi_2107	0.35	+0.0
2,232,383	-		Dshi_2107	0.36	-0.0
2,232,383	-		Dshi_2107	0.36	-0.6
2,232,383	-		Dshi_2107	0.36	-0.7
2,232,383	-		Dshi_2107	0.36	+0.1
2,232,383	-		Dshi_2107	0.36	+1.1
2,232,385	+		Dshi_2107	0.36	-1.2
2,232,385	+		Dshi_2107	0.36	-0.6
2,232,385	+		Dshi_2107	0.36	+1.0
2,232,388	-		Dshi_2107	0.36	+0.3
2,232,393	-		Dshi_2107	0.37	+0.3