Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3643

Experiment: Bile salts 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.5 mg/ml
4,719,496	-		BT3642	0.36	+1.9
4,719,518	+		BT3642	0.37	+2.9
4,719,543	+		BT3642	0.39	+3.0
4,719,544	-		BT3642	0.39	+2.5
4,719,544	-		BT3642	0.39	+3.9
4,719,544	-		BT3642	0.39	+1.2
4,719,544	-		BT3642	0.39	+1.5
4,719,573	-		BT3642	0.41	+2.9
4,719,603	-		BT3642	0.43	+2.5
4,719,603	-		BT3642	0.43	+4.4
4,719,606	+		BT3642	0.44	+3.8
4,719,607	-		BT3642	0.44	+4.6
4,719,607	-		BT3642	0.44	+0.5
4,719,608	+		BT3642	0.44	+4.0
4,719,668	-		BT3642	0.48	+1.9
4,719,696	-		BT3642	0.50	+4.4
4,719,696	-		BT3642	0.50	+4.0
4,719,814	-		BT3642	0.59	+1.1
4,719,816	+		BT3642	0.59	+2.4
4,719,817	-		BT3642	0.59	+4.4
4,719,817	-		BT3642	0.59	+3.8
4,719,828	+		BT3642	0.60	+3.7
4,719,902	+		BT3642	0.65	+0.9
4,719,903	-		BT3642	0.65	+2.8
4,720,030	+		BT3642	0.74	+4.8
4,720,031	-		BT3642	0.75	+1.8
4,720,031	-		BT3642	0.75	+3.6
4,720,031	-		BT3642	0.75	+3.1
4,720,037	-		BT3642	0.75	+2.8
4,720,069	+		BT3642	0.77	+3.3
4,720,234	-				+1.5
4,720,245	+				+4.0
4,720,246	-				+4.7
4,720,247	+				+3.4
4,720,335	+				+2.5
4,720,335	+				+3.9
4,720,336	-				+4.3
4,720,336	-				+1.3
4,720,415	+				+3.9
4,720,483	-				-1.7
4,720,487	+				+1.5
4,720,492	+				+2.5
4,720,497	+				-1.3
4,720,592	+		BT3643	0.28	+0.6
4,720,593	-		BT3643	0.28	-1.1
4,720,614	+		BT3643	0.33	-0.1
4,720,640	+		BT3643	0.40	-0.2
4,720,721	+		BT3643	0.61	-0.2
4,720,837	+				-0.9
4,720,838	-				+1.1
4,720,841	-				+0.6
4,720,882	-				-1.3
4,720,884	-				-0.6
4,720,887	-				+0.2
4,720,893	+				-0.9
4,720,893	+				-0.3
4,720,893	+				-1.1
4,721,028	-				+0.4
4,721,030	+				-2.2
4,721,031	-				-0.1
4,721,033	-				+0.5
4,721,033	-				-0.1
4,721,036	+				-1.7
4,721,037	-				+0.5
4,721,037	-				+1.1