Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2797

Experiment: Bile salts 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.5 mg/ml
3,470,271	-				-1.4
3,470,271	-				-0.9
3,470,327	-				-0.9
3,470,425	-		BT2797	0.11	-0.1
3,470,431	-		BT2797	0.11	-0.1
3,470,481	-		BT2797	0.14	-1.3
3,470,490	-		BT2797	0.15	-1.1
3,470,582	-		BT2797	0.22	+0.4
3,470,611	-		BT2797	0.24	-1.4
3,470,661	-		BT2797	0.27	-3.0
3,470,679	-		BT2797	0.28	-1.1
3,470,679	-		BT2797	0.28	-1.4
3,470,683	-		BT2797	0.29	-1.4
3,470,683	-		BT2797	0.29	-0.9
3,470,683	-		BT2797	0.29	-0.9
3,470,917	-		BT2797	0.45	-2.1
3,470,926	-		BT2797	0.46	-2.2
3,471,251	-		BT2797	0.68	-2.4
3,471,273	-		BT2797	0.70	-0.6
3,471,273	-		BT2797	0.70	+0.4
3,471,292	-		BT2797	0.71	-2.4
3,471,439	-		BT2797	0.81	-1.4
3,471,520	-		BT2797	0.87	-1.9
3,471,520	-		BT2797	0.87	-0.7
3,471,520	-		BT2797	0.87	-1.5
3,471,679	-				-1.6
3,471,693	-				-0.4
3,471,707	-				-1.4
3,471,814	+				-1.8
3,471,817	+				-1.5
3,471,817	+				-3.3
3,471,817	+				-1.3
3,471,824	-				-2.6
3,471,828	-				-1.4
3,471,847	-				-1.6
3,471,849	+				-0.1
3,471,849	+				-0.7
3,471,869	-				-0.9
3,471,886	-				-2.7
3,471,886	-				-1.6
3,471,956	+				-0.9
3,472,001	-				-2.8
3,472,017	+				-1.4
3,472,030	+				-0.4
3,472,058	-		BT2798	0.10	-1.3
3,472,063	+		BT2798	0.11	-1.8
3,472,072	-		BT2798	0.11	-3.3
3,472,146	+		BT2798	0.15	-0.6
3,472,147	-		BT2798	0.15	-2.0
3,472,248	+		BT2798	0.21	+1.4
3,472,248	+		BT2798	0.21	-2.7
3,472,308	+		BT2798	0.25	-2.9
3,472,336	+		BT2798	0.27	-3.3
3,472,337	-		BT2798	0.27	-1.4
3,472,350	+		BT2798	0.27	-4.4
3,472,360	+		BT2798	0.28	-2.5
3,472,387	+		BT2798	0.30	-0.7
3,472,391	-		BT2798	0.30	-1.4
3,472,401	-		BT2798	0.30	-1.9
3,472,440	+		BT2798	0.33	-1.1
3,472,441	-		BT2798	0.33	-1.5
3,472,441	-		BT2798	0.33	-0.1
3,472,441	-		BT2798	0.33	-3.2
3,472,441	-		BT2798	0.33	-2.1
3,472,445	+		BT2798	0.33	-1.9
3,472,445	+		BT2798	0.33	-1.1
3,472,446	-		BT2798	0.33	-0.1
3,472,450	+		BT2798	0.33	+0.4
3,472,501	+		BT2798	0.36	-0.1
3,472,502	-		BT2798	0.36	-1.6
3,472,502	-		BT2798	0.36	-2.2
3,472,503	+		BT2798	0.36	-1.2
3,472,504	-		BT2798	0.37	-1.7
3,472,537	+		BT2798	0.38	-2.0
3,472,539	+		BT2798	0.39	-2.0
3,472,543	-		BT2798	0.39	+1.4
3,472,580	+		BT2798	0.41	-3.0
3,472,580	+		BT2798	0.41	-0.9
3,472,618	+		BT2798	0.43	-3.3
3,472,691	-		BT2798	0.48	-1.3