Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2175

Experiment: Bile salts 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.5 mg/ml
2,734,603	+		BT2173	0.69	-1.0
2,734,629	+		BT2173	0.71	+0.0
2,734,635	+		BT2173	0.72	-0.7
2,734,635	+		BT2173	0.72	-1.4
2,734,636	-		BT2173	0.72	-1.4
2,734,644	+		BT2173	0.73	-0.4
2,734,691	-		BT2173	0.78	-1.4
2,734,691	-		BT2173	0.78	-1.3
2,734,754	-		BT2173	0.84	-1.9
2,734,795	+		BT2173	0.88	-0.7
2,734,859	+				-1.7
2,734,860	-				-1.4
2,734,863	+				-3.5
2,734,864	-				-2.6
2,734,928	+				-1.1
2,734,932	+				-1.2
2,734,971	+				-1.6
2,735,068	-		BT2174	0.18	+0.6
2,735,117	+		BT2174	0.25	-1.4
2,735,132	-		BT2174	0.27	-1.2
2,735,155	-		BT2174	0.31	+0.0
2,735,209	+		BT2174	0.39	+1.0
2,735,210	-		BT2174	0.39	-3.3
2,735,312	-		BT2174	0.54	-0.4
2,735,331	-		BT2174	0.57	-1.9
2,735,364	+		BT2174	0.62	-0.7
2,735,387	+		BT2174	0.65	-0.1
2,735,425	+		BT2174	0.71	-0.7
2,735,425	+		BT2174	0.71	-1.3
2,735,426	-		BT2174	0.71	+0.6
2,735,528	-		BT2174	0.86	-1.2
2,735,540	-		BT2174	0.88	-2.6
2,735,596	+				-0.9
2,735,597	-				-2.0
2,735,597	-				-0.7
2,735,597	-				-0.6
2,735,641	+		BT2175	0.11	-1.0
2,735,652	-		BT2175	0.14	+1.6
2,735,653	+		BT2175	0.14	+0.0
2,735,654	-		BT2175	0.15	+0.0
2,735,714	+		BT2175	0.31	-1.0
2,735,715	-		BT2175	0.32	-0.7
2,735,739	+		BT2175	0.38	-1.0
2,735,741	+		BT2175	0.39	-1.6
2,735,776	+		BT2175	0.49	-1.0
2,735,836	+		BT2175	0.66	+0.3
2,735,836	+		BT2175	0.66	-0.7
2,735,837	-		BT2175	0.66	+4.2
2,735,837	-		BT2175	0.66	-1.4
2,735,837	-		BT2175	0.66	-0.6
2,735,841	+		BT2175	0.67	-1.7
2,735,907	+		BT2175	0.85	-1.0
2,735,914	+		BT2175	0.87	-0.3
2,735,914	+		BT2175	0.87	-1.4
2,735,914	+		BT2175	0.87	-0.9
2,736,045	+				-0.9
2,736,063	+				-0.7
2,736,064	-				-1.9
2,736,098	+				-1.2
2,736,098	+				-1.9
2,736,098	+				-0.9
2,736,099	-				-1.2
2,736,122	+				-1.1
2,736,123	-				-0.7
2,736,178	+		BT2176	0.26	-0.4
2,736,182	+		BT2176	0.28	-1.5
2,736,183	-		BT2176	0.28	-1.5
2,736,236	-		BT2176	0.47	-1.6
2,736,251	+		BT2176	0.52	-2.3
2,736,321	-		BT2176	0.76	-1.4
2,736,323	-		BT2176	0.77	+0.2
2,736,349	+		BT2176	0.86	-0.4
2,736,349	+		BT2176	0.86	-1.0
2,736,350	-		BT2176	0.86	-1.2
2,736,352	+		BT2176	0.87	+1.6
2,736,353	-		BT2176	0.87	-1.7
2,736,354	+		BT2176	0.88	-1.9
2,736,354	+		BT2176	0.88	+1.3
2,736,354	+		BT2176	0.88	-0.1
2,736,354	+		BT2176	0.88	-2.4
2,736,358	+		BT2176	0.89	-0.7
2,736,365	+				-2.2
2,736,386	-				-2.1
2,736,444	-				-1.2
2,736,481	-		BT2177	0.16	+0.6
2,736,485	+		BT2177	0.16	+0.0
2,736,486	-		BT2177	0.16	-0.4
2,736,486	-		BT2177	0.16	-0.7
2,736,520	+		BT2177	0.22	-3.0
2,736,521	-		BT2177	0.22	-0.2
2,736,631	-		BT2177	0.40	-2.0
2,736,712	+		BT2177	0.54	-1.1
2,736,714	+		BT2177	0.54	-3.6
2,736,715	-		BT2177	0.54	+0.0
2,736,730	+		BT2177	0.56	-1.1
2,736,787	-		BT2177	0.66	-2.2
2,736,838	+		BT2177	0.74	-0.6
2,736,872	-		BT2177	0.80	-0.6