Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1286

Experiment: Bile salts 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.5 mg/ml
1,600,949	+				-2.2
1,601,010	+				+1.0
1,601,017	-				+0.9
1,601,017	-				-1.5
1,601,028	+				-1.1
1,601,032	+				-0.2
1,601,033	-				+0.5
1,601,076	-				-1.2
1,601,076	-				-0.0
1,601,154	+				+0.2
1,601,174	-				-0.2
1,601,189	-				-1.9
1,601,189	-				+0.4
1,601,200	-				-1.0
1,601,200	-				+0.4
1,601,562	+				+0.8
1,601,671	+				-0.2
1,601,717	+				+0.2
1,601,735	+				+0.2
1,601,735	+				+0.5
1,601,735	+				-0.2
1,601,736	-				+0.9
1,601,736	-				+0.8
1,601,737	+				-0.8
1,601,737	+				+1.2
1,601,737	+				-0.8
1,601,742	+				-0.2
1,601,742	+				+3.1
1,601,809	+				-0.5
1,601,830	+				+0.8
1,601,831	-				+0.2
1,601,831	-				+0.6
1,601,921	+				+1.2
1,601,925	+				+0.8
1,601,950	+				+1.1
1,602,024	-				-0.5
1,602,139	+		BT1286	0.13	+2.1
1,602,158	+		BT1286	0.14	+2.8
1,602,158	+		BT1286	0.14	+1.8
1,602,159	-		BT1286	0.14	+0.8
1,602,159	-		BT1286	0.14	+1.8
1,602,216	+		BT1286	0.18	+1.8
1,602,246	+		BT1286	0.19	-0.0
1,602,247	-		BT1286	0.20	+0.8
1,602,364	+		BT1286	0.26	+1.8
1,602,412	-		BT1286	0.29	+0.6
1,602,421	+		BT1286	0.30	+1.6
1,602,457	+		BT1286	0.32	+0.9
1,602,463	-		BT1286	0.32	+0.6
1,602,495	+		BT1286	0.34	-1.4
1,602,518	+		BT1286	0.35	+0.0
1,602,569	+		BT1286	0.38	+0.6
1,602,571	+		BT1286	0.39	-0.2
1,602,572	-		BT1286	0.39	+0.8
1,602,742	-		BT1286	0.49	+2.5
1,602,765	+		BT1286	0.50	-0.4
1,602,909	-		BT1286	0.58	+0.2
1,602,913	-		BT1286	0.59	-0.5
1,602,913	-		BT1286	0.59	+0.0
1,602,950	+		BT1286	0.61	+0.8
1,602,950	+		BT1286	0.61	+0.1
1,602,950	+		BT1286	0.61	+0.8
1,603,054	+		BT1286	0.67	-1.1
1,603,054	+		BT1286	0.67	-0.8
1,603,055	-		BT1286	0.67	+3.0
1,603,087	-		BT1286	0.69	+2.1
1,603,141	+		BT1286	0.72	+0.9
1,603,142	-		BT1286	0.72	+0.8
1,603,171	-		BT1286	0.74	+2.0
1,603,255	-		BT1286	0.79	-1.4
1,603,326	-		BT1286	0.83	-0.8
1,603,327	+		BT1286	0.83	-0.8
1,603,568	-				+1.3
1,603,613	+				-0.6
1,603,735	+				-0.6
1,603,736	-				+1.2
1,603,736	-				-0.9
1,603,741	-				-0.6
1,603,745	-				+0.2
1,603,749	-				-1.0
1,603,768	+				+0.8
1,603,768	+				+2.8
1,603,874	-				+0.3
1,603,891	+		BT1287	0.13	+1.4
1,603,917	+		BT1287	0.17	-0.2
1,603,936	-		BT1287	0.20	+1.8
1,603,946	+		BT1287	0.21	-1.2
1,604,042	-		BT1287	0.36	+0.3
1,604,050	-		BT1287	0.37	+1.2
1,604,053	-		BT1287	0.38	+1.2
1,604,147	+		BT1287	0.53	-0.1
1,604,330	+		BT1287	0.81	-0.0
1,604,330	+		BT1287	0.81	-0.6
1,604,331	-		BT1287	0.81	-1.8
1,604,440	+				-3.0
1,604,460	+				-0.2
1,604,566	-				+0.8
1,604,566	-				+0.8
1,604,606	-				-0.2