Experiment: Bile salts 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0311 and BT0312 are separated by 37 nucleotides BT0312 and BT0313 are separated by 24 nucleotides BT0313 and BT0314 are separated by 250 nucleotides
BT0311: BT0311 - lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (NCBI ptt file), at 373,622 to 374,992
BT0311
BT0312: BT0312 - 2-oxoisovalerate dehydrogenase beta subunit (NCBI ptt file), at 375,030 to 377,066
BT0312
BT0313: BT0313 - flavodoxin (NCBI ptt file), at 377,091 to 377,606
BT0313
BT0314: BT0314 - ribosomal protein L11 methyltransferase (NCBI ptt file), at 377,857 to 378,699
BT0314
Position (kb) 375
376
377
378 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 374.089 kb on - strand, within BT0311 at 374.146 kb on - strand, within BT0311 at 374.165 kb on - strand, within BT0311 at 374.174 kb on - strand, within BT0311 at 374.290 kb on + strand, within BT0311 at 374.291 kb on - strand, within BT0311 at 374.348 kb on - strand, within BT0311 at 374.474 kb on + strand, within BT0311 at 374.476 kb on + strand, within BT0311 at 374.477 kb on - strand, within BT0311 at 374.492 kb on + strand, within BT0311 at 374.520 kb on - strand, within BT0311 at 374.667 kb on + strand, within BT0311 at 374.668 kb on - strand, within BT0311 at 374.671 kb on + strand, within BT0311 at 374.671 kb on + strand, within BT0311 at 374.674 kb on - strand, within BT0311 at 374.734 kb on + strand, within BT0311 at 374.740 kb on + strand, within BT0311 at 374.740 kb on + strand, within BT0311 at 374.741 kb on - strand, within BT0311 at 374.828 kb on - strand, within BT0311 at 374.869 kb on + strand at 374.888 kb on - strand at 374.910 kb on - strand at 374.922 kb on + strand at 374.932 kb on + strand at 375.014 kb on - strand at 375.043 kb on - strand at 375.049 kb on + strand at 375.348 kb on - strand, within BT0312 at 375.348 kb on - strand, within BT0312 at 375.380 kb on + strand, within BT0312 at 375.449 kb on - strand, within BT0312 at 375.449 kb on - strand, within BT0312 at 375.451 kb on - strand, within BT0312 at 375.451 kb on - strand, within BT0312 at 375.497 kb on + strand, within BT0312 at 375.525 kb on - strand, within BT0312 at 375.666 kb on - strand, within BT0312 at 375.669 kb on + strand, within BT0312 at 375.727 kb on - strand, within BT0312 at 375.758 kb on - strand, within BT0312 at 375.807 kb on - strand, within BT0312 at 375.838 kb on - strand, within BT0312 at 375.890 kb on + strand, within BT0312 at 375.947 kb on - strand, within BT0312 at 376.231 kb on + strand, within BT0312 at 376.260 kb on - strand, within BT0312 at 376.265 kb on - strand, within BT0312 at 376.265 kb on - strand, within BT0312 at 376.268 kb on + strand, within BT0312 at 376.363 kb on - strand, within BT0312 at 376.400 kb on + strand, within BT0312 at 376.443 kb on + strand, within BT0312 at 376.443 kb on + strand, within BT0312 at 376.444 kb on - strand, within BT0312 at 376.445 kb on + strand, within BT0312 at 376.446 kb on - strand, within BT0312 at 376.460 kb on - strand, within BT0312 at 376.461 kb on + strand, within BT0312 at 376.478 kb on - strand, within BT0312 at 376.511 kb on + strand, within BT0312 at 376.511 kb on + strand, within BT0312 at 376.511 kb on + strand, within BT0312 at 376.553 kb on - strand, within BT0312 at 376.706 kb on + strand, within BT0312 at 376.706 kb on + strand, within BT0312 at 376.707 kb on - strand, within BT0312 at 376.707 kb on - strand, within BT0312 at 376.718 kb on + strand, within BT0312 at 376.719 kb on - strand, within BT0312 at 376.814 kb on + strand, within BT0312 at 376.967 kb on + strand at 376.973 kb on + strand at 376.974 kb on - strand at 377.083 kb on + strand at 377.083 kb on + strand at 377.085 kb on + strand at 377.088 kb on + strand at 377.090 kb on + strand at 377.090 kb on + strand at 377.091 kb on - strand at 377.112 kb on + strand at 377.242 kb on + strand, within BT0313 at 377.243 kb on - strand, within BT0313 at 377.280 kb on - strand, within BT0313 at 377.280 kb on - strand, within BT0313 at 377.296 kb on + strand, within BT0313 at 377.578 kb on + strand at 377.612 kb on + strand at 377.646 kb on - strand at 377.648 kb on + strand at 377.650 kb on + strand at 377.651 kb on - strand at 377.728 kb on - strand at 377.778 kb on + strand at 377.779 kb on - strand at 377.785 kb on - strand at 377.788 kb on - strand at 377.793 kb on + strand at 377.793 kb on + strand at 377.796 kb on - strand at 377.796 kb on - strand at 377.859 kb on - strand at 377.899 kb on - strand at 377.905 kb on + strand at 377.964 kb on - strand, within BT0314 at 378.048 kb on + strand, within BT0314
Per-strain Table
Position Strand Gene LocusTag Fraction Bile salts 0.5 mg/ml remove 374,089 - BT0311 0.34 -1.7 374,146 - BT0311 0.38 -0.2 374,165 - BT0311 0.40 -0.9 374,174 - BT0311 0.40 +1.8 374,290 + BT0311 0.49 -1.4 374,291 - BT0311 0.49 -0.6 374,348 - BT0311 0.53 -0.2 374,474 + BT0311 0.62 -3.3 374,476 + BT0311 0.62 -0.9 374,477 - BT0311 0.62 +0.9 374,492 + BT0311 0.63 +0.4 374,520 - BT0311 0.65 -2.1 374,667 + BT0311 0.76 -1.1 374,668 - BT0311 0.76 +0.3 374,671 + BT0311 0.77 -1.6 374,671 + BT0311 0.77 -0.9 374,674 - BT0311 0.77 -0.8 374,734 + BT0311 0.81 +0.2 374,740 + BT0311 0.82 -0.8 374,740 + BT0311 0.82 -0.8 374,741 - BT0311 0.82 +0.5 374,828 - BT0311 0.88 -1.4 374,869 + +0.1 374,888 - -1.9 374,910 - -0.6 374,922 + -1.1 374,932 + -1.4 375,014 - +0.8 375,043 - -1.2 375,049 + -1.7 375,348 - BT0312 0.16 -0.6 375,348 - BT0312 0.16 +0.8 375,380 + BT0312 0.17 -1.7 375,449 - BT0312 0.21 -2.7 375,449 - BT0312 0.21 +1.4 375,451 - BT0312 0.21 -0.2 375,451 - BT0312 0.21 +1.1 375,497 + BT0312 0.23 +0.8 375,525 - BT0312 0.24 +0.6 375,666 - BT0312 0.31 -0.6 375,669 + BT0312 0.31 +2.8 375,727 - BT0312 0.34 +0.2 375,758 - BT0312 0.36 -1.1 375,807 - BT0312 0.38 -0.6 375,838 - BT0312 0.40 -1.2 375,890 + BT0312 0.42 -2.0 375,947 - BT0312 0.45 +0.4 376,231 + BT0312 0.59 +0.0 376,260 - BT0312 0.60 +0.2 376,265 - BT0312 0.61 -0.4 376,265 - BT0312 0.61 -0.7 376,268 + BT0312 0.61 -0.4 376,363 - BT0312 0.65 +0.3 376,400 + BT0312 0.67 -1.1 376,443 + BT0312 0.69 -0.4 376,443 + BT0312 0.69 +0.9 376,444 - BT0312 0.69 +0.4 376,445 + BT0312 0.69 -0.1 376,446 - BT0312 0.70 -0.6 376,460 - BT0312 0.70 -1.3 376,461 + BT0312 0.70 -0.7 376,478 - BT0312 0.71 +0.9 376,511 + BT0312 0.73 -1.7 376,511 + BT0312 0.73 +0.4 376,511 + BT0312 0.73 +0.4 376,553 - BT0312 0.75 +0.7 376,706 + BT0312 0.82 -0.1 376,706 + BT0312 0.82 -0.5 376,707 - BT0312 0.82 -1.2 376,707 - BT0312 0.82 -0.2 376,718 + BT0312 0.83 +1.2 376,719 - BT0312 0.83 -0.6 376,814 + BT0312 0.88 -0.4 376,967 + +0.3 376,973 + -1.1 376,974 - -1.2 377,083 + -1.1 377,083 + -0.2 377,085 + -1.8 377,088 + -0.8 377,090 + -2.1 377,090 + -1.7 377,091 - +0.1 377,112 + -0.8 377,242 + BT0313 0.29 +1.8 377,243 - BT0313 0.29 -0.2 377,280 - BT0313 0.37 +0.4 377,280 - BT0313 0.37 -1.7 377,296 + BT0313 0.40 -0.1 377,578 + -0.6 377,612 + -1.6 377,646 - +1.8 377,648 + -1.8 377,650 + -1.1 377,651 - -0.8 377,728 - -0.2 377,778 + +0.8 377,779 - -2.7 377,785 - -0.8 377,788 - +1.2 377,793 + -0.2 377,793 + +0.8 377,796 - -1.1 377,796 - -1.2 377,859 - -0.2 377,899 - -0.2 377,905 + -0.2 377,964 - BT0314 0.13 +0.8 378,048 + BT0314 0.23 +0.4
Or see this region's nucleotide sequence