Experiment: D-Maltose 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK54_RS01115 and LRK54_RS01120 are separated by 165 nucleotides LRK54_RS01120 and LRK54_RS01125 are separated by 25 nucleotides LRK54_RS01125 and LRK54_RS01130 overlap by 10 nucleotides
LRK54_RS01115: LRK54_RS01115 - NADH-quinone oxidoreductase subunit D, at 249,417 to 250,670
_RS01115
LRK54_RS01120: LRK54_RS01120 - NADH-quinone oxidoreductase subunit C, at 250,836 to 251,564
_RS01120
LRK54_RS01125: LRK54_RS01125 - NADH-quinone oxidoreductase subunit B, at 251,590 to 252,147
_RS01125
LRK54_RS01130: LRK54_RS01130 - NADH-quinone oxidoreductase subunit A, at 252,138 to 252,494
_RS01130
Position (kb) 250
251
252 Strain fitness (log2 ratio) -2
-1
0
1
2 at 250.749 kb on - strand at 250.750 kb on - strand at 250.750 kb on - strand at 250.750 kb on - strand at 250.750 kb on - strand at 250.750 kb on - strand at 250.750 kb on - strand at 250.750 kb on - strand at 250.760 kb on - strand at 250.760 kb on - strand at 250.760 kb on - strand at 250.760 kb on - strand at 250.760 kb on - strand at 250.760 kb on - strand at 250.815 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.838 kb on - strand at 250.946 kb on - strand, within LRK54_RS01120 at 251.592 kb on - strand at 251.592 kb on - strand at 251.592 kb on - strand at 251.592 kb on - strand at 251.592 kb on - strand at 251.592 kb on - strand at 251.592 kb on - strand at 252.505 kb on - strand at 252.505 kb on - strand at 252.505 kb on - strand at 252.505 kb on - strand at 252.505 kb on - strand at 252.505 kb on - strand at 252.505 kb on - strand at 252.505 kb on - strand at 252.505 kb on - strand at 252.505 kb on - strand at 252.505 kb on - strand at 252.505 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose 20 mM remove 250,749 - +0.2 250,750 - +0.6 250,750 - -0.0 250,750 - -0.1 250,750 - +2.6 250,750 - +0.1 250,750 - -1.0 250,750 - -0.7 250,760 - +0.6 250,760 - -0.0 250,760 - +0.5 250,760 - +0.1 250,760 - -2.1 250,760 - +0.1 250,815 - -0.2 250,838 - -0.9 250,838 - -1.0 250,838 - +0.4 250,838 - +0.2 250,838 - +1.2 250,838 - +0.8 250,838 - +0.3 250,838 - +1.1 250,838 - +0.2 250,838 - +0.1 250,838 - -0.1 250,838 - -0.7 250,838 - +1.6 250,838 - +0.8 250,838 - -0.8 250,838 - -0.8 250,838 - +0.4 250,838 - +1.4 250,838 - +0.2 250,838 - +0.5 250,838 - +0.2 250,838 - +0.3 250,838 - +0.4 250,838 - -0.6 250,838 - +0.1 250,838 - +0.6 250,838 - +0.6 250,838 - +0.5 250,838 - +1.4 250,838 - -0.2 250,838 - -0.8 250,838 - +0.9 250,838 - -0.4 250,838 - +1.0 250,838 - -0.2 250,838 - -0.2 250,838 - -0.1 250,838 - +0.1 250,838 - -1.0 250,838 - +0.3 250,838 - -0.5 250,838 - -0.1 250,838 - -0.0 250,838 - +0.2 250,838 - +1.6 250,838 - -0.8 250,838 - -0.2 250,838 - +1.6 250,838 - +0.6 250,838 - +0.4 250,838 - +0.2 250,946 - LRK54_RS01120 0.15 +0.6 251,592 - +0.1 251,592 - -0.9 251,592 - +0.1 251,592 - -0.1 251,592 - +0.2 251,592 - -0.5 251,592 - +0.5 252,505 - +0.2 252,505 - -1.0 252,505 - +0.2 252,505 - +0.2 252,505 - -0.2 252,505 - +2.2 252,505 - +0.2 252,505 - -0.0 252,505 - +2.6 252,505 - -0.4 252,505 - +0.2 252,505 - +1.6
Or see this region's nucleotide sequence