Strain Fitness in Pantoea sp. MT58 around IAI47_11725

Experiment: Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
2,485,252	+				-2.2
2,485,252	+				-1.6
2,485,255	+				-0.6
2,485,255	+				+0.5
2,485,255	+				+0.6
2,485,255	+				+0.3
2,485,256	-				-0.7
2,485,256	-				+2.1
2,485,256	-				-0.6
2,485,369	+		IAI47_11720	0.12	+0.7
2,485,417	+		IAI47_11720	0.18	+1.7
2,485,431	+		IAI47_11720	0.19	+0.3
2,485,432	-		IAI47_11720	0.20	+0.1
2,485,432	-		IAI47_11720	0.20	-2.0
2,485,468	+		IAI47_11720	0.24	+2.7
2,485,615	+		IAI47_11720	0.40	-1.3
2,485,615	+		IAI47_11720	0.40	-0.1
2,485,615	+		IAI47_11720	0.40	+0.4
2,485,615	+		IAI47_11720	0.40	+0.4
2,485,615	+		IAI47_11720	0.40	+0.9
2,485,616	-		IAI47_11720	0.40	-2.4
2,485,616	-		IAI47_11720	0.40	-0.3
2,485,616	-		IAI47_11720	0.40	+2.7
2,485,720	+		IAI47_11720	0.52	-0.3
2,485,720	+		IAI47_11720	0.52	+0.6
2,485,721	-		IAI47_11720	0.52	+1.5
2,485,838	+		IAI47_11720	0.65	-1.3
2,485,838	+		IAI47_11720	0.65	-1.3
2,485,838	+		IAI47_11720	0.65	-1.6
2,485,838	+		IAI47_11720	0.65	+0.5
2,485,838	+		IAI47_11720	0.65	-1.9
2,485,838	+		IAI47_11720	0.65	+2.5
2,485,839	-		IAI47_11720	0.66	+1.2
2,485,839	-		IAI47_11720	0.66	-0.3
2,485,884	-		IAI47_11720	0.71	+0.9
2,485,913	+		IAI47_11720	0.74	-0.0
2,485,913	+		IAI47_11720	0.74	-0.9
2,485,914	-		IAI47_11720	0.74	-1.2
2,485,914	-		IAI47_11720	0.74	-0.3
2,485,914	-		IAI47_11720	0.74	+0.4
2,485,915	+		IAI47_11720	0.74	+1.1
2,485,915	+		IAI47_11720	0.74	-3.0
2,485,915	+		IAI47_11720	0.74	-0.7
2,485,915	+		IAI47_11720	0.74	-1.0
2,485,915	+		IAI47_11720	0.74	-2.1
2,485,915	+		IAI47_11720	0.74	+2.2
2,485,916	-		IAI47_11720	0.74	+1.2
2,485,916	-		IAI47_11720	0.74	+1.3
2,485,916	-		IAI47_11720	0.74	-0.5
2,485,916	-		IAI47_11720	0.74	+0.5
2,485,925	+		IAI47_11720	0.75	+0.3
2,485,925	+		IAI47_11720	0.75	-1.9
2,485,925	+		IAI47_11720	0.75	-0.9
2,485,926	-		IAI47_11720	0.75	-1.6
2,485,926	-		IAI47_11720	0.75	+1.3
2,485,926	-		IAI47_11720	0.75	-0.9
2,485,926	-		IAI47_11720	0.75	+1.9
2,485,926	-		IAI47_11720	0.75	-1.6
2,485,927	+		IAI47_11720	0.75	+0.4
2,485,927	+		IAI47_11720	0.75	+1.9
2,485,927	+		IAI47_11720	0.75	+1.4
2,485,927	+		IAI47_11720	0.75	-1.7
2,485,927	+		IAI47_11720	0.75	+3.2
2,485,927	+		IAI47_11720	0.75	+4.4
2,485,927	+		IAI47_11720	0.75	-1.6
2,485,927	+		IAI47_11720	0.75	-1.4
2,485,927	+		IAI47_11720	0.75	-2.9
2,485,927	+		IAI47_11720	0.75	-1.7
2,485,928	-		IAI47_11720	0.76	+0.5
2,485,928	-		IAI47_11720	0.76	-0.7
2,485,928	-		IAI47_11720	0.76	-2.2
2,485,928	-		IAI47_11720	0.76	-1.9
2,485,928	-		IAI47_11720	0.76	-0.1
2,485,928	-		IAI47_11720	0.76	+0.7
2,485,928	-		IAI47_11720	0.76	+0.8
2,485,928	-		IAI47_11720	0.76	-0.2
2,485,928	-		IAI47_11720	0.76	+0.4
2,485,943	+		IAI47_11720	0.77	+1.7
2,485,943	+		IAI47_11720	0.77	+0.9
2,485,943	+		IAI47_11720	0.77	-0.6
2,485,943	+		IAI47_11720	0.77	-0.3
2,485,944	-		IAI47_11720	0.77	+0.9
2,485,944	-		IAI47_11720	0.77	+0.1
2,485,944	-		IAI47_11720	0.77	-2.4
2,485,967	+		IAI47_11720	0.80	-1.9
2,485,967	+		IAI47_11720	0.80	-0.5
2,485,968	-		IAI47_11720	0.80	+1.4
2,486,013	+		IAI47_11720	0.85	+1.3
2,486,014	-		IAI47_11720	0.85	+1.7
2,486,038	+		IAI47_11720	0.88	+1.0
2,486,039	-		IAI47_11720	0.88	+2.3
2,486,044	+		IAI47_11720	0.89	-0.1
2,486,099	-				-0.6
2,486,142	-				+3.1
2,486,154	+				-1.6
2,486,154	+				-2.5
2,486,154	+				+0.1
2,486,154	+				+1.4
2,486,154	+				-1.7
2,486,154	+				-1.0
2,486,154	+				-0.0
2,486,155	-				-2.1
2,486,155	-				-0.4
2,486,155	-				-0.9
2,486,155	-				+0.7
2,486,155	-				+1.7
2,486,197	+				-0.7
2,486,197	+				+0.8
2,486,197	+				-0.5
2,486,198	-				+1.2
2,486,198	-				-1.1
2,486,388	+		IAI47_11725	0.14	-2.4
2,486,388	+		IAI47_11725	0.14	-1.9
2,486,388	+		IAI47_11725	0.14	-2.2
2,486,388	+		IAI47_11725	0.14	-0.5
2,486,389	-		IAI47_11725	0.14	-0.9
2,486,416	+		IAI47_11725	0.16	+3.4
2,486,416	+		IAI47_11725	0.16	-1.3
2,486,416	+		IAI47_11725	0.16	-1.1
2,486,416	+		IAI47_11725	0.16	-0.7
2,486,416	+		IAI47_11725	0.16	+0.7
2,486,416	+		IAI47_11725	0.16	+2.3
2,486,416	+		IAI47_11725	0.16	-1.4
2,486,416	+		IAI47_11725	0.16	+1.2
2,486,417	-		IAI47_11725	0.16	-0.0
2,486,417	-		IAI47_11725	0.16	-1.6
2,486,417	-		IAI47_11725	0.16	-0.6
2,486,417	-		IAI47_11725	0.16	-1.4
2,486,417	-		IAI47_11725	0.16	+0.1
2,486,417	-		IAI47_11725	0.16	-2.1
2,486,534	+		IAI47_11725	0.25	+1.3
2,486,534	+		IAI47_11725	0.25	+1.5
2,486,651	+		IAI47_11725	0.33	+0.4
2,486,744	+		IAI47_11725	0.40	+0.3
2,486,744	+		IAI47_11725	0.40	+0.1
2,486,815	+		IAI47_11725	0.45	+1.7
2,486,815	+		IAI47_11725	0.45	-2.4
2,486,816	-		IAI47_11725	0.45	+0.2
2,487,003	-		IAI47_11725	0.59	-2.1
2,487,125	+		IAI47_11725	0.68	-0.1
2,487,125	+		IAI47_11725	0.68	-0.9
2,487,212	+		IAI47_11725	0.74	-0.5
2,487,213	-		IAI47_11725	0.74	-1.6
2,487,213	-		IAI47_11725	0.74	-1.4
2,487,279	+		IAI47_11725	0.79	-1.6
2,487,280	-		IAI47_11725	0.79	-2.0
2,487,376	+		IAI47_11725	0.86	+2.7
2,487,377	-		IAI47_11725	0.86	-2.0
2,487,431	+		IAI47_11725	0.90	+1.7
2,487,431	+		IAI47_11725	0.90	-0.9
2,487,432	-				+2.2
2,487,437	+				+0.7
2,487,451	-				+1.1
2,487,453	-				-1.1
2,487,457	+				+2.9
2,487,458	-				+0.9
2,487,614	+				+0.3
2,487,614	+				-1.7
2,487,660	-		IAI47_11730	0.16	-2.3
2,487,690	+		IAI47_11730	0.21	-0.6
2,487,690	+		IAI47_11730	0.21	-1.6
2,487,690	+		IAI47_11730	0.21	+0.9
2,487,691	-		IAI47_11730	0.21	-1.1
2,487,702	+		IAI47_11730	0.23	+2.2
2,487,703	-		IAI47_11730	0.23	+1.1
2,487,703	-		IAI47_11730	0.23	-1.6
2,487,703	-		IAI47_11730	0.23	+0.9
2,487,722	+		IAI47_11730	0.27	-1.9
2,487,722	+		IAI47_11730	0.27	-0.9
2,487,722	+		IAI47_11730	0.27	+1.9
2,487,723	-		IAI47_11730	0.27	+0.1
2,487,723	-		IAI47_11730	0.27	+0.8
2,487,723	-		IAI47_11730	0.27	+1.7
2,487,905	+		IAI47_11730	0.59	+0.5
2,487,906	-		IAI47_11730	0.59	-1.9
2,487,906	-		IAI47_11730	0.59	-0.7
2,487,918	+		IAI47_11730	0.61	+1.3
2,487,919	-		IAI47_11730	0.61	-1.6
2,487,919	-		IAI47_11730	0.61	+1.2
2,487,919	-		IAI47_11730	0.61	-0.8
2,487,919	-		IAI47_11730	0.61	+0.3
2,487,919	-		IAI47_11730	0.61	+2.5
2,487,919	-		IAI47_11730	0.61	-2.7
2,487,919	-		IAI47_11730	0.61	+0.7
2,487,919	-		IAI47_11730	0.61	+0.6
2,487,928	-		IAI47_11730	0.63	+0.5
2,487,947	+		IAI47_11730	0.66	-1.4
2,487,947	+		IAI47_11730	0.66	-0.7
2,487,947	+		IAI47_11730	0.66	+0.7
2,487,947	+		IAI47_11730	0.66	+0.9
2,487,947	+		IAI47_11730	0.66	+0.1
2,487,947	+		IAI47_11730	0.66	-1.1
2,487,947	+		IAI47_11730	0.66	-1.1
2,487,948	-		IAI47_11730	0.66	+1.7
2,488,092	+				+3.5
2,488,093	-				+3.9
2,488,093	-				-0.1
2,488,093	-				-1.6
2,488,093	-				+0.1
2,488,093	-				+0.2
2,488,168	-				+1.9
2,488,190	-		IAI47_11735	0.13	+0.2
2,488,296	+		IAI47_11735	0.69	-1.5
2,488,296	+		IAI47_11735	0.69	+0.9
2,488,296	+		IAI47_11735	0.69	+0.3
2,488,297	-		IAI47_11735	0.69	-1.6
2,488,371	-				+2.1
2,488,387	+				+1.1
2,488,388	-				-1.7
2,488,492	+				-0.1
2,488,520	+				+1.1
2,488,520	+				-0.0
2,488,521	-				-1.3
2,488,523	+				+0.5
2,488,525	+				+0.3
2,488,525	+				+0.9
2,488,533	+				-1.4
2,488,534	-				-1.6
2,488,534	-				-0.6
2,488,549	-				+0.4