Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07315 and BWI76_RS07320 are separated by 136 nucleotides BWI76_RS07320 and BWI76_RS07325 are separated by 165 nucleotides
BWI76_RS07315: BWI76_RS07315 - PTS sugar transporter, at 1,540,518 to 1,541,888
_RS07315
BWI76_RS07320: BWI76_RS07320 - carbohydrate porin, at 1,542,025 to 1,543,542
_RS07320
BWI76_RS07325: BWI76_RS07325 - aminoimidazole riboside kinase, at 1,543,708 to 1,544,631
_RS07325
Position (kb)
1542
1543
1544 Strain fitness (log2 ratio)
-2
-1
0
1 at 1541.183 kb on - strand, within BWI76_RS07315 at 1541.310 kb on - strand, within BWI76_RS07315 at 1541.316 kb on - strand, within BWI76_RS07315 at 1542.238 kb on - strand, within BWI76_RS07320 at 1542.384 kb on + strand, within BWI76_RS07320 at 1542.441 kb on + strand, within BWI76_RS07320 at 1542.441 kb on + strand, within BWI76_RS07320 at 1542.536 kb on + strand, within BWI76_RS07320 at 1542.536 kb on + strand, within BWI76_RS07320 at 1542.536 kb on + strand at 1542.536 kb on - strand, within BWI76_RS07320 at 1542.544 kb on - strand, within BWI76_RS07320 at 1542.748 kb on - strand, within BWI76_RS07320 at 1542.933 kb on + strand, within BWI76_RS07320 at 1543.915 kb on - strand, within BWI76_RS07325 at 1543.915 kb on - strand, within BWI76_RS07325 at 1543.984 kb on + strand, within BWI76_RS07325 at 1544.127 kb on + strand, within BWI76_RS07325 at 1544.247 kb on + strand, within BWI76_RS07325 at 1544.250 kb on - strand, within BWI76_RS07325 at 1544.321 kb on - strand, within BWI76_RS07325 at 1544.361 kb on + strand, within BWI76_RS07325 at 1544.461 kb on + strand, within BWI76_RS07325
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 1,541,183 - BWI76_RS07315 0.49 +0.2 1,541,310 - BWI76_RS07315 0.58 +0.2 1,541,316 - BWI76_RS07315 0.58 +0.5 1,542,238 - BWI76_RS07320 0.14 -0.1 1,542,384 + BWI76_RS07320 0.24 +1.2 1,542,441 + BWI76_RS07320 0.27 +0.2 1,542,441 + BWI76_RS07320 0.27 -1.9 1,542,536 + BWI76_RS07320 0.34 +0.5 1,542,536 + BWI76_RS07320 0.34 -0.2 1,542,536 + +1.6 1,542,536 - BWI76_RS07320 0.34 +0.4 1,542,544 - BWI76_RS07320 0.34 +0.0 1,542,748 - BWI76_RS07320 0.48 -0.5 1,542,933 + BWI76_RS07320 0.60 +0.8 1,543,915 - BWI76_RS07325 0.22 -0.6 1,543,915 - BWI76_RS07325 0.22 -1.7 1,543,984 + BWI76_RS07325 0.30 -1.0 1,544,127 + BWI76_RS07325 0.45 -0.4 1,544,247 + BWI76_RS07325 0.58 -0.4 1,544,250 - BWI76_RS07325 0.59 +0.5 1,544,321 - BWI76_RS07325 0.66 -0.3 1,544,361 + BWI76_RS07325 0.71 -0.5 1,544,461 + BWI76_RS07325 0.81 +0.2
Or see this region's nucleotide sequence