Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01840 and BWI76_RS01845 are separated by 98 nucleotides BWI76_RS01845 and BWI76_RS01850 are separated by 107 nucleotides
BWI76_RS01840: BWI76_RS01840 - maltose ABC transporter, ATPase component (MalK) <small>(from data)</small>, at 374,860 to 375,969
_RS01840
BWI76_RS01845: BWI76_RS01845 - maltoporin, at 376,068 to 377,354
_RS01845
BWI76_RS01850: BWI76_RS01850 - maltose operon protein MalM, at 377,462 to 378,394
_RS01850
Position (kb) 376
377
378 Strain fitness (log2 ratio) -2
-1
0
1 at 375.168 kb on - strand, within BWI76_RS01840 at 375.681 kb on + strand, within BWI76_RS01840 at 375.924 kb on + strand at 375.995 kb on + strand at 376.139 kb on + strand at 376.347 kb on - strand, within BWI76_RS01845 at 376.375 kb on + strand, within BWI76_RS01845 at 376.547 kb on - strand, within BWI76_RS01845 at 376.708 kb on + strand, within BWI76_RS01845 at 376.708 kb on + strand, within BWI76_RS01845 at 376.733 kb on - strand, within BWI76_RS01845 at 376.786 kb on + strand, within BWI76_RS01845 at 376.932 kb on + strand, within BWI76_RS01845 at 377.030 kb on + strand, within BWI76_RS01845 at 377.195 kb on - strand, within BWI76_RS01845 at 377.487 kb on + strand at 377.608 kb on + strand, within BWI76_RS01850 at 377.782 kb on - strand, within BWI76_RS01850 at 377.998 kb on + strand, within BWI76_RS01850 at 377.998 kb on + strand, within BWI76_RS01850 at 377.998 kb on + strand, within BWI76_RS01850 at 378.006 kb on - strand, within BWI76_RS01850 at 378.093 kb on + strand, within BWI76_RS01850 at 378.108 kb on + strand, within BWI76_RS01850
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 375,168 - BWI76_RS01840 0.28 +0.3 375,681 + BWI76_RS01840 0.74 -0.2 375,924 + -0.8 375,995 + -0.4 376,139 + +1.1 376,347 - BWI76_RS01845 0.22 +0.1 376,375 + BWI76_RS01845 0.24 -0.3 376,547 - BWI76_RS01845 0.37 -0.2 376,708 + BWI76_RS01845 0.50 -0.6 376,708 + BWI76_RS01845 0.50 -0.1 376,733 - BWI76_RS01845 0.52 -2.6 376,786 + BWI76_RS01845 0.56 +0.5 376,932 + BWI76_RS01845 0.67 -0.1 377,030 + BWI76_RS01845 0.75 -0.3 377,195 - BWI76_RS01845 0.88 -0.2 377,487 + +0.6 377,608 + BWI76_RS01850 0.16 -0.7 377,782 - BWI76_RS01850 0.34 -1.6 377,998 + BWI76_RS01850 0.57 +0.5 377,998 + BWI76_RS01850 0.57 -0.1 377,998 + BWI76_RS01850 0.57 +0.2 378,006 - BWI76_RS01850 0.58 -0.4 378,093 + BWI76_RS01850 0.68 -0.2 378,108 + BWI76_RS01850 0.69 -0.5
Or see this region's nucleotide sequence