Experiment: acetate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22605 and AO356_22610 are separated by 164 nucleotides AO356_22610 and AO356_22615 are separated by 76 nucleotides AO356_22615 and AO356_22620 overlap by 14 nucleotides
AO356_22605: AO356_22605 - transporter, at 5,052,098 to 5,053,021
_22605
AO356_22610: AO356_22610 - hypothetical protein, at 5,053,186 to 5,053,728
_22610
AO356_22615: AO356_22615 - nodulation protein NolW, at 5,053,805 to 5,054,443
_22615
AO356_22620: AO356_22620 - ATPase, at 5,054,430 to 5,055,506
_22620
Position (kb) 5053
5054
5055 Strain fitness (log2 ratio) -1
0
1 at 5052.816 kb on - strand, within AO356_22605 at 5052.830 kb on + strand, within AO356_22605 at 5052.831 kb on - strand, within AO356_22605 at 5052.831 kb on - strand, within AO356_22605 at 5052.831 kb on - strand, within AO356_22605 at 5052.831 kb on - strand, within AO356_22605 at 5052.875 kb on + strand, within AO356_22605 at 5052.875 kb on + strand, within AO356_22605 at 5052.876 kb on - strand, within AO356_22605 at 5052.876 kb on - strand, within AO356_22605 at 5052.876 kb on - strand, within AO356_22605 at 5052.876 kb on - strand, within AO356_22605 at 5052.912 kb on + strand, within AO356_22605 at 5053.202 kb on + strand at 5053.202 kb on + strand at 5053.202 kb on + strand at 5053.404 kb on + strand, within AO356_22610 at 5053.728 kb on + strand at 5053.728 kb on + strand at 5053.728 kb on + strand at 5053.729 kb on - strand at 5053.729 kb on - strand at 5053.729 kb on - strand at 5054.590 kb on + strand, within AO356_22620 at 5054.591 kb on - strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.206 kb on - strand, within AO356_22620 at 5055.206 kb on - strand, within AO356_22620
Per-strain Table
Position Strand Gene LocusTag Fraction acetate 40 mM remove 5,052,816 - AO356_22605 0.78 +0.3 5,052,830 + AO356_22605 0.79 -0.2 5,052,831 - AO356_22605 0.79 -0.1 5,052,831 - AO356_22605 0.79 -0.2 5,052,831 - AO356_22605 0.79 -0.3 5,052,831 - AO356_22605 0.79 +0.9 5,052,875 + AO356_22605 0.84 -1.0 5,052,875 + AO356_22605 0.84 -0.1 5,052,876 - AO356_22605 0.84 -0.9 5,052,876 - AO356_22605 0.84 -0.1 5,052,876 - AO356_22605 0.84 -0.5 5,052,876 - AO356_22605 0.84 +0.1 5,052,912 + AO356_22605 0.88 +0.7 5,053,202 + +1.5 5,053,202 + +0.2 5,053,202 + +0.8 5,053,404 + AO356_22610 0.40 -0.6 5,053,728 + -0.5 5,053,728 + -0.3 5,053,728 + -1.2 5,053,729 - +0.2 5,053,729 - +0.9 5,053,729 - -0.3 5,054,590 + AO356_22620 0.15 +0.3 5,054,591 - AO356_22620 0.15 +1.2 5,055,205 + AO356_22620 0.72 -0.2 5,055,205 + AO356_22620 0.72 -0.3 5,055,205 + AO356_22620 0.72 -0.9 5,055,205 + AO356_22620 0.72 -0.3 5,055,206 - AO356_22620 0.72 +1.5 5,055,206 - AO356_22620 0.72 +0.4
Or see this region's nucleotide sequence