Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04735

Experiment: acetate 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 40 mM
1,062,073	+		AO356_04725	0.30	-1.8
1,062,073	+		AO356_04725	0.30	-0.4
1,062,074	-		AO356_04725	0.31	-0.6
1,062,074	-		AO356_04725	0.31	-0.0
1,062,086	+		AO356_04725	0.34	+1.1
1,062,101	-		AO356_04725	0.38	+0.3
1,062,101	-		AO356_04725	0.38	-0.2
1,062,101	-		AO356_04725	0.38	-0.9
1,062,102	+		AO356_04725	0.38	-1.4
1,062,106	-		AO356_04725	0.39	-0.4
1,062,141	-		AO356_04725	0.49	-1.5
1,062,180	+		AO356_04725	0.60	+0.7
1,062,180	+		AO356_04725	0.60	-0.1
1,062,180	+		AO356_04725	0.60	+0.9
1,062,181	-		AO356_04725	0.60	-1.4
1,062,181	-		AO356_04725	0.60	-0.4
1,062,181	-		AO356_04725	0.60	+0.0
1,062,290	+				-0.1
1,062,290	+				-0.2
1,062,291	-				+2.1
1,062,291	-				-0.2
1,062,613	+		AO356_04730	0.64	-1.1
1,062,613	+		AO356_04730	0.64	-0.0
1,062,613	+		AO356_04730	0.64	-0.6
1,062,679	+		AO356_04730	0.80	-1.0
1,062,679	+		AO356_04730	0.80	-0.3
1,062,679	+		AO356_04730	0.80	-0.8
1,062,679	+		AO356_04730	0.80	-0.7
1,062,679	+		AO356_04730	0.80	+0.5
1,062,679	+		AO356_04730	0.80	+0.1
1,062,680	-		AO356_04730	0.80	+0.9
1,062,680	-		AO356_04730	0.80	-0.9
1,062,680	-		AO356_04730	0.80	-0.0
1,062,680	-		AO356_04730	0.80	+1.9
1,062,680	-		AO356_04730	0.80	-0.0
1,062,680	-		AO356_04730	0.80	+0.6
1,062,680	-		AO356_04730	0.80	-1.3
1,062,743	+				+0.2
1,062,743	+				-0.5
1,062,744	-				-0.3
1,062,744	-				+0.1
1,062,744	-				+1.4
1,062,798	+				-0.2
1,062,809	+				-0.3
1,062,809	+				-0.2
1,062,810	-				-1.1
1,062,810	-				+1.0
1,062,810	-				-0.2
1,062,826	+				-0.0
1,062,827	-				-0.0
1,062,894	+				-0.3
1,062,894	+				-0.8
1,062,895	-				-0.6
1,063,038	-				-0.3
1,063,071	-				-0.3
1,063,125	+				+0.1
1,063,125	+				-0.4
1,063,125	+				+0.4
1,063,126	-				+0.1
1,063,166	+				+0.4
1,063,166	+				+0.3
1,063,166	+				+0.1
1,063,167	-				+0.0
1,063,167	-				-0.1
1,063,232	+				-0.1
1,063,232	+				+0.4
1,063,233	-				-0.2
1,063,281	-				-0.4
1,063,281	-				+0.8
1,063,281	-				+1.9
1,063,281	-				-0.4
1,063,333	+				+1.0
1,063,355	+				-1.2
1,063,355	+				-0.0
1,063,355	+				+0.2
1,063,355	+				+0.4
1,063,355	+				-0.7
1,063,356	-				-1.4
1,063,356	-				+0.2
1,063,356	-				-0.3
1,063,356	-				+0.2
1,063,356	-				-0.3
1,063,356	-				+0.9
1,063,359	+				+1.2
1,063,359	+				+0.1
1,063,360	-				+1.1
1,063,360	-				-0.1
1,063,360	-				+1.1
1,063,360	-				-0.1
1,063,402	+				+0.1
1,063,402	+				-1.0
1,063,453	-		AO356_04735	0.10	-0.6
1,063,498	+		AO356_04735	0.11	+0.5
1,063,498	+		AO356_04735	0.11	-0.1
1,063,498	+		AO356_04735	0.11	+0.0
1,063,498	+		AO356_04735	0.11	-0.5
1,063,498	+		AO356_04735	0.11	+0.4
1,063,499	-		AO356_04735	0.12	+0.4
1,063,499	-		AO356_04735	0.12	-0.3
1,063,499	-		AO356_04735	0.12	+0.4
1,063,499	-		AO356_04735	0.12	-0.1
1,063,499	-		AO356_04735	0.12	-0.6
1,063,499	-		AO356_04735	0.12	-2.3
1,063,507	-		AO356_04735	0.12	+0.5
1,063,507	-		AO356_04735	0.12	-0.2
1,063,507	-		AO356_04735	0.12	+0.5
1,063,532	+		AO356_04735	0.12	+0.8
1,063,592	+		AO356_04735	0.14	+0.7
1,063,593	-		AO356_04735	0.14	-0.1
1,063,626	+		AO356_04735	0.15	-0.5
1,063,645	+		AO356_04735	0.15	+0.3
1,063,645	+		AO356_04735	0.15	+0.2
1,063,646	-		AO356_04735	0.15	+0.6
1,063,646	-		AO356_04735	0.15	-1.3
1,063,646	-		AO356_04735	0.15	-0.2
1,063,646	-		AO356_04735	0.15	-0.6
1,063,667	+		AO356_04735	0.16	-0.1
1,063,667	+		AO356_04735	0.16	+0.3
1,063,668	-		AO356_04735	0.16	+1.0
1,063,727	+		AO356_04735	0.18	-1.8
1,063,728	-		AO356_04735	0.18	-0.2
1,063,728	-		AO356_04735	0.18	+0.6
1,063,731	+		AO356_04735	0.18	+0.6
1,063,731	+		AO356_04735	0.18	+0.3
1,063,732	-		AO356_04735	0.18	-1.7
1,063,732	-		AO356_04735	0.18	+0.1
1,063,732	-		AO356_04735	0.18	-1.6
1,063,732	-		AO356_04735	0.18	-0.4
1,063,791	+		AO356_04735	0.19	-0.9
1,063,792	-		AO356_04735	0.19	-0.2
1,063,792	-		AO356_04735	0.19	-0.8
1,063,798	+		AO356_04735	0.20	-0.7
1,063,798	+		AO356_04735	0.20	+1.2
1,063,798	+		AO356_04735	0.20	-0.8
1,063,798	+		AO356_04735	0.20	-0.9
1,063,798	+		AO356_04735	0.20	-0.2
1,063,798	+		AO356_04735	0.20	+0.3
1,063,799	-		AO356_04735	0.20	+0.7
1,063,799	-		AO356_04735	0.20	+0.2
1,063,799	-		AO356_04735	0.20	+0.8
1,063,799	-		AO356_04735	0.20	+0.0
1,063,799	-		AO356_04735	0.20	-0.4
1,063,799	-		AO356_04735	0.20	-0.6
1,063,799	-		AO356_04735	0.20	-0.5
1,063,799	-		AO356_04735	0.20	-1.2
1,063,799	-		AO356_04735	0.20	-0.2
1,063,799	-		AO356_04735	0.20	-1.0
1,063,869	+		AO356_04735	0.21	+0.3
1,063,870	-		AO356_04735	0.21	-0.4
1,063,870	-		AO356_04735	0.21	-0.4
1,063,870	-		AO356_04735	0.21	-0.4
1,063,870	-		AO356_04735	0.21	-0.7
1,063,870	-		AO356_04735	0.21	-0.7
1,063,874	+		AO356_04735	0.22	+0.4
1,063,874	+		AO356_04735	0.22	+0.3
1,063,874	+		AO356_04735	0.22	-0.4
1,063,875	-		AO356_04735	0.22	+0.1
1,063,875	-		AO356_04735	0.22	+0.2
1,063,909	+		AO356_04735	0.23	+0.4
1,063,909	+		AO356_04735	0.23	+0.7
1,063,909	+		AO356_04735	0.23	-1.1
1,063,910	-		AO356_04735	0.23	+0.3
1,063,910	-		AO356_04735	0.23	-2.0
1,063,910	-		AO356_04735	0.23	+0.8
1,063,910	-		AO356_04735	0.23	-0.8
1,063,910	-		AO356_04735	0.23	+0.3
1,063,966	-		AO356_04735	0.24	-0.0
1,063,971	+		AO356_04735	0.24	+1.3
1,064,006	+		AO356_04735	0.25	+1.3
1,064,007	-		AO356_04735	0.25	-1.5
1,064,007	-		AO356_04735	0.25	+0.1
1,064,081	+		AO356_04735	0.27	+0.8
1,064,081	+		AO356_04735	0.27	-0.2
1,064,081	+		AO356_04735	0.27	+1.1
1,064,081	+		AO356_04735	0.27	+0.1
1,064,089	+		AO356_04735	0.27	-1.7
1,064,089	+		AO356_04735	0.27	-0.3
1,064,089	+		AO356_04735	0.27	-0.2
1,064,090	-		AO356_04735	0.27	+0.4
1,064,130	+		AO356_04735	0.28	-1.0
1,064,131	-		AO356_04735	0.28	-0.4
1,064,184	+		AO356_04735	0.30	-0.7
1,064,186	+		AO356_04735	0.30	-1.4
1,064,186	+		AO356_04735	0.30	-0.5
1,064,186	+		AO356_04735	0.30	-0.4
1,064,186	+		AO356_04735	0.30	+0.6
1,064,186	+		AO356_04735	0.30	+0.4
1,064,186	+		AO356_04735	0.30	-0.1
1,064,186	+		AO356_04735	0.30	+0.2
1,064,186	+		AO356_04735	0.30	+0.6
1,064,186	+		AO356_04735	0.30	-0.6
1,064,186	+		AO356_04735	0.30	-1.4
1,064,187	-		AO356_04735	0.30	+1.1
1,064,187	-		AO356_04735	0.30	-0.7
1,064,187	-		AO356_04735	0.30	-1.6
1,064,187	-		AO356_04735	0.30	+0.2
1,064,187	-		AO356_04735	0.30	+0.5
1,064,187	-		AO356_04735	0.30	-0.7
1,064,187	-		AO356_04735	0.30	+0.4
1,064,190	+		AO356_04735	0.30	+0.1
1,064,190	+		AO356_04735	0.30	-0.5
1,064,190	+		AO356_04735	0.30	-0.4
1,064,190	+		AO356_04735	0.30	+0.5
1,064,190	+		AO356_04735	0.30	+0.3
1,064,190	+		AO356_04735	0.30	-0.7
1,064,190	+		AO356_04735	0.30	-0.0
1,064,190	+		AO356_04735	0.30	+0.4
1,064,190	+		AO356_04735	0.30	-0.6
1,064,213	+		AO356_04735	0.31	-0.0
1,064,214	-		AO356_04735	0.31	-0.7
1,064,261	+		AO356_04735	0.32	+1.2
1,064,261	+		AO356_04735	0.32	-1.8
1,064,262	-		AO356_04735	0.32	-0.9
1,064,269	+		AO356_04735	0.32	-0.1
1,064,269	+		AO356_04735	0.32	+0.4
1,064,269	+		AO356_04735	0.32	-1.0
1,064,270	-		AO356_04735	0.32	+1.7
1,064,270	-		AO356_04735	0.32	-0.7
1,064,270	-		AO356_04735	0.32	-1.6
1,064,319	-		AO356_04735	0.33	+0.6
1,064,319	-		AO356_04735	0.33	+0.2
1,064,319	-		AO356_04735	0.33	+0.6
1,066,245	-		AO356_04735	0.85	-0.3
1,066,245	-		AO356_04735	0.85	-1.0
1,066,245	-		AO356_04735	0.85	-0.5
1,066,245	-		AO356_04735	0.85	+0.8
1,066,250	-		AO356_04735	0.85	-0.1
1,066,250	-		AO356_04735	0.85	+0.8
1,066,250	-		AO356_04735	0.85	-2.1
1,066,250	-		AO356_04735	0.85	-0.2
1,066,250	-		AO356_04735	0.85	-0.7
1,066,250	-		AO356_04735	0.85	-0.3
1,066,250	-		AO356_04735	0.85	-0.5
1,066,250	-		AO356_04735	0.85	-1.1
1,066,250	-		AO356_04735	0.85	-0.9
1,066,250	-		AO356_04735	0.85	+0.2
1,066,250	-		AO356_04735	0.85	+0.0
1,066,250	-		AO356_04735	0.85	+0.0
1,066,250	-		AO356_04735	0.85	+0.6
1,066,502	+				+1.6
1,066,540	+				+0.4
1,066,540	+				-0.9
1,066,541	-				-0.2
1,066,541	-				-0.1
1,066,541	-				-0.8
1,066,554	+				+0.3
1,066,621	+				-0.1
1,066,621	+				+1.1
1,066,621	+				-0.5
1,066,622	-				-0.2
1,066,622	-				-0.1
1,066,622	-				+1.6
1,066,622	-				-0.3
1,066,622	-				-0.8
1,066,622	-				+0.4
1,066,629	+				-1.1
1,066,630	-				+1.4
1,066,630	-				-0.2
1,066,630	-				-0.9
1,066,630	-				-0.9
1,066,659	+				+0.8
1,066,659	+				-1.0
1,066,659	+				-0.9
1,066,659	+				-0.6
1,066,659	+				-0.4
1,066,659	+				+0.2
1,066,660	-				+0.5
1,066,664	-				-1.4
1,066,664	-				+0.4
1,066,701	+				-1.4
1,066,763	-				-1.5
1,066,763	-				-0.3
1,066,763	-				+0.9
1,066,763	-				+0.0
1,066,816	+				-0.3
1,066,825	+				-0.3
1,066,825	+				+0.3
1,066,826	-				+0.7
1,066,826	-				-0.0
1,066,826	-				+0.4
1,066,826	-				-0.3
1,066,826	-				-0.3
1,066,944	+				-0.2
1,066,944	+				-0.0
1,066,957	-				-0.6
1,067,017	+				-1.3
1,067,023	+				-1.1
1,067,023	+				+0.6
1,067,090	+				-0.1
1,067,090	+				+0.1
1,067,090	+				+0.8
1,067,090	+				-0.5
1,067,091	-				+0.5
1,067,091	-				-0.0
1,067,091	-				-1.0
1,067,123	+				+0.0
1,067,124	-				+1.4
1,067,134	+				+0.0
1,067,134	+				+0.3
1,067,163	+				+0.6
1,067,189	-				-0.4
1,067,189	-				+1.1
1,067,203	+				-1.0
1,067,203	+				-0.1
1,067,203	+				+0.4
1,067,203	+				-0.8
1,067,203	+				-0.9
1,067,203	+				-0.6
1,067,203	+				-0.7
1,067,204	-				+0.4
1,067,204	-				+0.1
1,067,204	-				-1.2
1,067,204	-				+0.0
1,067,204	-				-2.0
1,067,204	-				-0.4
1,067,312	-				-0.6
1,067,462	-				-0.3
1,067,462	-				+0.6
1,067,462	-				-1.6
1,067,462	-				+0.4
1,067,566	+				-0.1
1,067,566	+				+0.4
1,067,567	-				+0.6
1,067,567	-				+0.6
1,067,570	+				+1.2
1,067,570	+				-0.3
1,067,571	-				-1.1