Strain Fitness in Shewanella loihica PV-4 around Shew_3759

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
4,475,281	+				-0.8
4,475,291	-				+0.4
4,475,359	-		Shew_3758	0.12	-0.8
4,475,471	-		Shew_3758	0.28	+0.1
4,475,608	-		Shew_3758	0.48	+1.1
4,475,613	-		Shew_3758	0.48	-0.2
4,475,613	-		Shew_3758	0.48	+0.3
4,475,668	+		Shew_3758	0.56	-0.4
4,475,749	+		Shew_3758	0.68	-0.6
4,475,784	+		Shew_3758	0.72	-1.9
4,475,789	+		Shew_3758	0.73	-0.1
4,475,848	+		Shew_3758	0.81	-0.4
4,475,986	+				-1.1
4,476,131	+				+0.3
4,476,132	+				-0.0
4,476,184	-				+1.2
4,476,224	+				+0.8
4,476,274	-				+1.2
4,476,339	+		Shew_3759	0.14	+0.6
4,476,366	-		Shew_3759	0.17	+1.3
4,476,494	-		Shew_3759	0.27	+0.5
4,476,494	-		Shew_3759	0.27	+1.1
4,476,634	-		Shew_3759	0.38	+0.8
4,476,846	+		Shew_3759	0.56	+1.6
4,476,906	+		Shew_3759	0.61	+1.1
4,476,909	-		Shew_3759	0.61	+1.3
4,476,976	+		Shew_3759	0.66	+1.2
4,477,141	+		Shew_3759	0.80	+1.4
4,477,141	+		Shew_3759	0.80	+0.9
4,477,149	-		Shew_3759	0.80	+1.3
4,477,149	-		Shew_3759	0.80	+1.5
4,477,189	+		Shew_3759	0.84	+1.2
4,477,291	+				+1.3
4,477,330	-				+1.1
4,477,346	+				+0.2
4,477,391	+				-0.0
4,477,414	-				-0.1
4,477,419	-				-0.3
4,477,492	+				-0.1
4,477,537	+				+0.4
4,477,550	+				-0.2
4,477,579	+				-0.1
4,477,645	+				+2.6
4,477,645	+				+0.2
4,477,653	-				-0.0
4,477,672	-				+0.1
4,477,672	-				-0.1
4,477,676	+				-0.2
4,477,682	+				+0.1
4,477,702	-				-1.4
4,477,712	+				-0.1
4,477,863	+				+0.4
4,477,888	-				-0.6
4,477,888	-				-0.9
4,477,888	-				+0.3
4,477,888	-				+0.0
4,477,888	-				-0.3
4,477,888	-				-0.0
4,477,957	+				+0.4
4,477,962	+				+0.5
4,478,010	+		Shew_3760	0.12	-0.1
4,478,015	+		Shew_3760	0.12	-0.1
4,478,017	-		Shew_3760	0.12	-0.5
4,478,054	+		Shew_3760	0.14	+0.1
4,478,054	+		Shew_3760	0.14	-0.5
4,478,090	+		Shew_3760	0.17	+0.3
4,478,093	-		Shew_3760	0.17	+0.0
4,478,093	-		Shew_3760	0.17	-0.5
4,478,094	-		Shew_3760	0.17	+0.2
4,478,098	-		Shew_3760	0.17	+0.1
4,478,100	+		Shew_3760	0.17	+0.1
4,478,100	+		Shew_3760	0.17	+1.8
4,478,101	-		Shew_3760	0.17	-0.3
4,478,103	-		Shew_3760	0.17	-0.4
4,478,106	+		Shew_3760	0.18	+0.2
4,478,106	+		Shew_3760	0.18	+0.2
4,478,108	+		Shew_3760	0.18	+0.6
4,478,108	-		Shew_3760	0.18	+0.2
4,478,115	+		Shew_3760	0.18	+0.1
4,478,115	+		Shew_3760	0.18	+0.0
4,478,116	-		Shew_3760	0.18	+0.1
4,478,146	+		Shew_3760	0.20	+0.9
4,478,180	+		Shew_3760	0.22	-0.2
4,478,180	+		Shew_3760	0.22	+0.2
4,478,180	+		Shew_3760	0.22	+0.0
4,478,188	-		Shew_3760	0.23	+0.3
4,478,205	+		Shew_3760	0.24	-0.4
4,478,205	+		Shew_3760	0.24	+0.6
4,478,210	+		Shew_3760	0.24	-0.4
4,478,210	+		Shew_3760	0.24	+0.1
4,478,218	-		Shew_3760	0.25	+0.2
4,478,218	-		Shew_3760	0.25	+0.8
4,478,223	+		Shew_3760	0.25	-0.1
4,478,225	+		Shew_3760	0.25	+0.6
4,478,230	+		Shew_3760	0.25	-0.2
4,478,233	-		Shew_3760	0.25	-0.1
4,478,250	+		Shew_3760	0.27	+0.6
4,478,258	-		Shew_3760	0.27	+0.0
4,478,262	+		Shew_3760	0.27	+0.5
4,478,262	+		Shew_3760	0.27	-2.0
4,478,262	+		Shew_3760	0.27	+0.0
4,478,310	+		Shew_3760	0.30	+0.0
4,478,313	-		Shew_3760	0.30	+4.5
4,478,327	-		Shew_3760	0.31	+1.4
4,478,371	-		Shew_3760	0.34	+0.1
4,478,387	-		Shew_3760	0.35	-0.3