Strain Fitness in Shewanella loihica PV-4 around Shew_3757

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
4,472,647	-		Shew_3756	0.48	-0.9
4,472,744	+		Shew_3756	0.54	-0.1
4,472,744	+		Shew_3756	0.54	-0.3
4,472,845	+		Shew_3756	0.61	-1.1
4,472,853	-		Shew_3756	0.61	-1.3
4,472,868	-		Shew_3756	0.62	-0.6
4,472,911	-		Shew_3756	0.65	-0.8
4,472,968	+		Shew_3756	0.69	-0.4
4,473,177	+		Shew_3756	0.82	-1.1
4,473,368	+				+0.1
4,473,368	+				-0.7
4,473,368	+				-0.7
4,473,368	+				-0.8
4,473,376	-				-1.5
4,473,376	-				-2.5
4,473,421	-				+0.1
4,473,602	-				+0.8
4,473,631	-				+0.4
4,473,796	-		Shew_3757	0.19	-0.3
4,474,136	-		Shew_3757	0.39	+0.1
4,474,225	+		Shew_3757	0.45	+0.2
4,474,225	+		Shew_3757	0.45	-0.8
4,474,225	+		Shew_3757	0.45	+1.7
4,474,225	+		Shew_3757	0.45	-0.1
4,474,233	-		Shew_3757	0.45	+1.2
4,474,233	-		Shew_3757	0.45	-0.5
4,474,312	+		Shew_3757	0.50	-0.6
4,474,312	+		Shew_3757	0.50	-0.4
4,474,498	-		Shew_3757	0.61	-0.8
4,474,566	+		Shew_3757	0.65	+0.1
4,474,566	+		Shew_3757	0.65	-0.5
4,474,571	+		Shew_3757	0.65	-0.7
4,474,574	-		Shew_3757	0.66	-1.0
4,474,574	-		Shew_3757	0.66	-0.6
4,474,579	-		Shew_3757	0.66	-0.2
4,474,579	-		Shew_3757	0.66	-0.8
4,474,599	-		Shew_3757	0.67	+0.3
4,474,715	-		Shew_3757	0.74	-0.4
4,474,715	-		Shew_3757	0.74	-0.5
4,474,882	+		Shew_3757	0.84	-0.1
4,475,008	-				-0.9
4,475,008	-				-0.7
4,475,088	+				-0.4
4,475,101	-				-0.5
4,475,123	+				-0.3
4,475,281	+				-0.8
4,475,291	-				+0.4
4,475,359	-		Shew_3758	0.12	-0.8
4,475,471	-		Shew_3758	0.28	+0.1
4,475,608	-		Shew_3758	0.48	+1.1
4,475,613	-		Shew_3758	0.48	-0.2
4,475,613	-		Shew_3758	0.48	+0.3
4,475,668	+		Shew_3758	0.56	-0.4
4,475,749	+		Shew_3758	0.68	-0.6
4,475,784	+		Shew_3758	0.72	-1.9
4,475,789	+		Shew_3758	0.73	-0.1
4,475,848	+		Shew_3758	0.81	-0.4
4,475,986	+				-1.1
4,476,131	+				+0.3
4,476,132	+				-0.0