Strain Fitness in Shewanella loihica PV-4 around Shew_3372
Experiment: Fusidic 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,020,351 | + | -0.1 | |||
4,020,378 | - | -0.2 | |||
4,020,658 | + | +0.4 | |||
4,020,771 | + | -0.0 | |||
4,020,922 | + | +0.3 | |||
4,020,991 | - | -0.0 | |||
4,021,165 | + | -0.3 | |||
4,021,173 | - | -0.3 | |||
4,021,185 | - | -1.0 | |||
4,021,210 | + | +0.4 | |||
4,021,637 | - | Shew_3372 | 0.28 | +0.3 | |
4,021,659 | + | Shew_3372 | 0.31 | -0.2 | |
4,021,659 | + | Shew_3372 | 0.31 | +0.2 | |
4,021,690 | + | Shew_3372 | 0.34 | -0.6 | |
4,021,698 | - | Shew_3372 | 0.34 | -0.6 | |
4,022,323 | - | -0.2 | |||
4,022,419 | + | +1.2 |
Or see this region's nucleotide sequence