Strain Fitness in Shewanella loihica PV-4 around Shew_2668
Experiment: Fusidic 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,155,535 | + | +4.1 | |||
| 3,155,651 | - | +4.2 | |||
| 3,155,660 | + | +4.2 | |||
| 3,155,660 | + | +4.9 | |||
| 3,155,784 | - | +3.3 | |||
| 3,156,029 | - | +3.9 | |||
| 3,156,089 | - | +4.0 | |||
| 3,156,089 | - | +4.4 | |||
| 3,156,355 | - | Shew_2668 | 0.13 | +4.4 | |
| 3,156,384 | - | Shew_2668 | 0.15 | +4.3 | |
| 3,156,575 | + | Shew_2668 | 0.26 | +3.9 | |
| 3,156,575 | + | Shew_2668 | 0.26 | +4.2 | |
| 3,156,673 | + | Shew_2668 | 0.32 | +3.0 | |
| 3,157,354 | + | Shew_2668 | 0.74 | +4.1 | |
| 3,157,844 | - | +0.9 | |||
| 3,158,462 | - | Shew_2669 | 0.24 | -0.0 |
Or see this region's nucleotide sequence