Strain Fitness in Shewanella loihica PV-4 around Shew_1402

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
1,614,020	+		Shew_1401	0.21	+1.7
1,614,020	+		Shew_1401	0.21	+2.5
1,614,040	+		Shew_1401	0.23	+1.6
1,614,040	+		Shew_1401	0.23	+1.9
1,614,102	-		Shew_1401	0.28	+2.9
1,614,110	-		Shew_1401	0.29	+3.1
1,614,196	+		Shew_1401	0.37	+0.9
1,614,340	+		Shew_1401	0.50	+1.7
1,614,342	+		Shew_1401	0.50	+1.9
1,614,342	+		Shew_1401	0.50	+2.5
1,614,342	+		Shew_1401	0.50	+2.1
1,614,342	+		Shew_1401	0.50	+1.6
1,614,448	+		Shew_1401	0.60	+1.4
1,614,448	+		Shew_1401	0.60	+1.8
1,614,456	-		Shew_1401	0.60	+2.5
1,614,466	-		Shew_1401	0.61	+3.5
1,614,466	-		Shew_1401	0.61	+2.4
1,614,520	+		Shew_1401	0.66	+2.4
1,614,520	+		Shew_1401	0.66	+1.8
1,614,520	+		Shew_1401	0.66	+1.9
1,614,612	+		Shew_1401	0.75	+2.6
1,614,686	+		Shew_1401	0.81	+1.9
1,614,731	+		Shew_1401	0.86	+2.0
1,614,787	-				+3.2
1,614,787	+				+2.8
1,614,787	+				+2.3
1,614,795	-				+3.1
1,614,811	+				+1.4
1,614,848	+				+2.7
1,614,933	-				+4.7
1,615,134	+		Shew_1402	0.28	+4.7
1,615,142	+		Shew_1402	0.29	+5.9
1,615,147	+		Shew_1402	0.29	+4.0
1,615,147	+		Shew_1402	0.29	+4.7
1,615,153	+		Shew_1402	0.30	+4.7
1,615,296	+		Shew_1402	0.46	+4.7
1,615,327	-		Shew_1402	0.50	+5.0
1,615,500	+		Shew_1402	0.70	+4.5
1,615,557	+		Shew_1402	0.76	+4.6
1,615,559	+		Shew_1402	0.76	+4.7
1,615,604	+		Shew_1402	0.82	+4.8
1,615,604	+		Shew_1402	0.82	+4.3
1,615,622	+		Shew_1402	0.84	+4.8
1,615,723	+				+4.9
1,615,780	+				+5.2
1,615,800	-				+5.5
1,615,853	+				+4.5
1,615,862	+		Shew_1403	0.10	+4.1
1,616,035	+		Shew_1403	0.30	+4.5
1,616,130	+		Shew_1403	0.41	+4.7
1,616,137	+		Shew_1403	0.42	+4.6
1,616,137	+		Shew_1403	0.42	+4.7
1,616,137	+		Shew_1403	0.42	+4.3
1,616,167	+		Shew_1403	0.45	+4.5
1,616,314	+		Shew_1403	0.62	+5.1
1,616,344	+		Shew_1403	0.66	+4.8
1,616,410	+		Shew_1403	0.73	+4.6
1,616,410	+		Shew_1403	0.73	+5.2
1,616,410	+		Shew_1403	0.73	+4.6
1,616,410	+		Shew_1403	0.73	+5.4
1,616,418	-		Shew_1403	0.74	+5.1
1,616,488	+		Shew_1403	0.82	+4.9
1,616,606	+				+3.4
1,616,614	-				+5.1
1,616,753	+		Shew_1404	0.20	+3.0
1,616,753	+		Shew_1404	0.20	+3.9
1,616,753	+		Shew_1404	0.20	+3.5
1,616,753	+		Shew_1404	0.20	+4.0
1,616,753	+		Shew_1404	0.20	+4.4