Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3381

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
3,553,480	+				-0.2
3,553,488	-		Dshi_3380	0.10	-0.3
3,553,488	-		Dshi_3380	0.10	+0.1
3,553,490	+		Dshi_3380	0.11	+0.0
3,553,526	-		Dshi_3380	0.15	-1.4
3,553,529	+		Dshi_3380	0.15	+0.2
3,553,530	+		Dshi_3380	0.15	-1.8
3,553,530	+		Dshi_3380	0.15	-0.2
3,553,530	+		Dshi_3380	0.15	+0.2
3,553,536	-		Dshi_3380	0.16	-0.1
3,553,537	-		Dshi_3380	0.16	-0.6
3,553,537	-		Dshi_3380	0.16	-0.5
3,553,537	-		Dshi_3380	0.16	+0.2
3,553,537	-		Dshi_3380	0.16	-2.4
3,553,538	+		Dshi_3380	0.16	+0.9
3,553,538	+		Dshi_3380	0.16	+0.3
3,553,538	+		Dshi_3380	0.16	+0.8
3,553,539	+		Dshi_3380	0.16	-0.4
3,553,539	+		Dshi_3380	0.16	+0.7
3,553,539	+		Dshi_3380	0.16	-2.5
3,553,539	+		Dshi_3380	0.16	-0.4
3,553,539	+		Dshi_3380	0.16	-0.1
3,553,539	+		Dshi_3380	0.16	-1.8
3,553,539	+		Dshi_3380	0.16	-1.2
3,553,539	+		Dshi_3380	0.16	+1.2
3,553,539	+		Dshi_3380	0.16	+0.3
3,553,540	-		Dshi_3380	0.17	+0.1
3,553,541	+		Dshi_3380	0.17	+0.5
3,553,541	+		Dshi_3380	0.17	-1.8
3,553,541	+		Dshi_3380	0.17	+0.1
3,553,543	+		Dshi_3380	0.17	-0.2
3,553,544	-		Dshi_3380	0.17	+0.8
3,553,544	-		Dshi_3380	0.17	-0.8
3,553,546	-		Dshi_3380	0.17	-0.2
3,553,546	-		Dshi_3380	0.17	-0.0
3,553,546	-		Dshi_3380	0.17	+1.2
3,553,547	-		Dshi_3380	0.17	-0.1
3,553,547	-		Dshi_3380	0.17	-0.1
3,553,547	-		Dshi_3380	0.17	-1.1
3,553,547	-		Dshi_3380	0.17	-0.9
3,553,547	-		Dshi_3380	0.17	+0.6
3,553,547	-		Dshi_3380	0.17	-1.8
3,553,547	-		Dshi_3380	0.17	+1.2
3,553,549	-		Dshi_3380	0.18	+0.8
3,553,549	-		Dshi_3380	0.18	-1.8
3,553,549	-		Dshi_3380	0.18	+1.5
3,553,549	-		Dshi_3380	0.18	+0.9
3,553,551	+		Dshi_3380	0.18	-1.1
3,553,556	-		Dshi_3380	0.19	-1.0
3,553,559	-		Dshi_3380	0.19	+1.5
3,553,563	+		Dshi_3380	0.19	-0.6
3,553,563	+		Dshi_3380	0.19	-0.8
3,553,563	+		Dshi_3380	0.19	-0.7
3,553,563	+		Dshi_3380	0.19	+1.6
3,553,563	+		Dshi_3380	0.19	-1.1
3,553,566	-		Dshi_3380	0.20	-2.4
3,553,566	-		Dshi_3380	0.20	+1.2
3,553,571	-		Dshi_3380	0.20	+0.7
3,553,571	-		Dshi_3380	0.20	+0.1
3,553,571	-		Dshi_3380	0.20	-1.5
3,553,571	-		Dshi_3380	0.20	-0.4
3,553,571	-		Dshi_3380	0.20	-0.5
3,553,571	-		Dshi_3380	0.20	+0.0
3,553,571	-		Dshi_3380	0.20	+0.1
3,553,571	-		Dshi_3380	0.20	+0.7
3,553,573	+		Dshi_3380	0.21	-0.2
3,553,573	+		Dshi_3380	0.21	+0.1
3,553,578	-		Dshi_3380	0.21	-0.1
3,553,588	-		Dshi_3380	0.22	-0.1
3,553,588	-		Dshi_3380	0.22	-0.1
3,553,588	-		Dshi_3380	0.22	-0.0
3,553,594	+		Dshi_3380	0.23	+1.2
3,553,597	-		Dshi_3380	0.24	-0.4
3,553,602	+		Dshi_3380	0.24	+0.2
3,553,602	-		Dshi_3380	0.24	+2.1
3,553,617	+		Dshi_3380	0.26	-0.6
3,553,622	+		Dshi_3380	0.27	-0.1
3,553,625	+		Dshi_3380	0.27	+0.2
3,553,625	-		Dshi_3380	0.27	-1.1
3,553,626	-		Dshi_3380	0.27	+0.2
3,553,628	+		Dshi_3380	0.27	-0.4
3,553,630	-		Dshi_3380	0.28	+0.4
3,553,630	-		Dshi_3380	0.28	-1.8
3,553,630	-		Dshi_3380	0.28	-0.1
3,553,633	+		Dshi_3380	0.28	+1.0
3,553,633	+		Dshi_3380	0.28	-0.4
3,553,633	+		Dshi_3380	0.28	-2.8
3,553,638	+		Dshi_3380	0.29	-0.8
3,553,638	+		Dshi_3380	0.29	+0.6
3,553,638	+		Dshi_3380	0.29	-0.7
3,553,638	+		Dshi_3380	0.29	-0.4
3,553,639	+		Dshi_3380	0.29	-1.6
3,553,639	+		Dshi_3380	0.29	-1.4
3,553,639	+		Dshi_3380	0.29	-0.6
3,553,639	+		Dshi_3380	0.29	-1.0
3,553,639	+		Dshi_3380	0.29	+0.0
3,553,639	+		Dshi_3380	0.29	-1.9
3,553,641	-		Dshi_3380	0.29	+0.5
3,553,641	-		Dshi_3380	0.29	-0.0
3,553,643	-		Dshi_3380	0.29	-0.2
3,553,646	-		Dshi_3380	0.30	-0.2
3,553,646	-		Dshi_3380	0.30	+1.2
3,553,647	+		Dshi_3380	0.30	-0.5
3,553,647	+		Dshi_3380	0.30	+0.2
3,553,647	-		Dshi_3380	0.30	-0.8
3,553,647	-		Dshi_3380	0.30	+1.2
3,553,647	-		Dshi_3380	0.30	+0.9
3,553,682	+		Dshi_3380	0.34	-0.7
3,553,683	+		Dshi_3380	0.34	+0.5
3,553,689	+		Dshi_3380	0.35	+0.6
3,553,689	+		Dshi_3380	0.35	-0.4
3,553,691	-		Dshi_3380	0.35	-1.1
3,553,695	+		Dshi_3380	0.36	+0.2
3,553,695	+		Dshi_3380	0.36	+0.2
3,553,695	+		Dshi_3380	0.36	-0.1
3,553,704	+		Dshi_3380	0.37	-1.4
3,553,717	-		Dshi_3380	0.38	-0.0
3,553,746	-		Dshi_3380	0.42	-1.3
3,553,746	-		Dshi_3380	0.42	+0.5
3,553,746	-		Dshi_3380	0.42	+1.2
3,553,762	+		Dshi_3380	0.44	+1.1
3,553,763	+		Dshi_3380	0.44	-0.6
3,553,770	-		Dshi_3380	0.45	-0.6
3,553,777	-		Dshi_3380	0.46	+1.1
3,553,824	+		Dshi_3380	0.51	+0.4
3,553,834	+		Dshi_3380	0.53	-2.2
3,553,847	+		Dshi_3380	0.54	-0.3
3,553,847	-		Dshi_3380	0.54	+0.0
3,553,847	-		Dshi_3380	0.54	-0.2
3,553,849	+		Dshi_3380	0.54	+0.4
3,553,855	-		Dshi_3380	0.55	-0.2
3,553,857	-		Dshi_3380	0.55	-0.2
3,553,857	-		Dshi_3380	0.55	-0.4
3,553,857	-		Dshi_3380	0.55	+0.6
3,553,859	+		Dshi_3380	0.56	-2.5
3,553,869	-		Dshi_3380	0.57	+1.0
3,553,880	+		Dshi_3380	0.58	+0.7
3,553,885	+		Dshi_3380	0.59	-0.4
3,553,893	-		Dshi_3380	0.60	+2.0
3,553,893	-		Dshi_3380	0.60	-0.2
3,553,893	-		Dshi_3380	0.60	-1.2
3,553,895	-		Dshi_3380	0.60	+0.6
3,553,902	-		Dshi_3380	0.61	-0.6
3,553,902	-		Dshi_3380	0.61	+1.6
3,553,902	-		Dshi_3380	0.61	-1.5
3,553,904	+		Dshi_3380	0.61	+1.4
3,553,904	+		Dshi_3380	0.61	-0.1
3,553,904	+		Dshi_3380	0.61	-0.8
3,553,912	-		Dshi_3380	0.62	+0.3
3,553,912	-		Dshi_3380	0.62	+0.3
3,553,912	-		Dshi_3380	0.62	+0.4
3,553,912	-		Dshi_3380	0.62	-1.1
3,553,918	-		Dshi_3380	0.63	+1.2
3,553,968	+		Dshi_3380	0.69	+0.8
3,553,976	-		Dshi_3380	0.70	+1.2
3,553,978	+		Dshi_3380	0.70	-0.3
3,553,978	+		Dshi_3380	0.70	+0.3
3,553,983	+		Dshi_3380	0.71	+0.4
3,553,983	+		Dshi_3380	0.71	-0.2
3,553,986	-		Dshi_3380	0.71	-1.8
3,553,986	-		Dshi_3380	0.71	-0.4
3,553,986	-		Dshi_3380	0.71	-1.8
3,553,986	-		Dshi_3380	0.71	-0.1
3,553,986	-		Dshi_3380	0.71	+0.5
3,553,986	-		Dshi_3380	0.71	+1.1
3,553,986	-		Dshi_3380	0.71	+0.6
3,553,988	+		Dshi_3380	0.71	-0.2
3,553,988	-		Dshi_3380	0.71	-1.9
3,553,988	-		Dshi_3380	0.71	-1.5
3,553,991	-		Dshi_3380	0.72	-0.4
3,553,991	-		Dshi_3380	0.72	-0.6
3,554,030	+		Dshi_3380	0.76	-0.1
3,554,042	-		Dshi_3380	0.78	-1.2
3,554,058	-		Dshi_3380	0.80	-0.3
3,554,068	-		Dshi_3380	0.81	+0.1
3,554,083	+		Dshi_3380	0.83	-0.1
3,554,091	-		Dshi_3380	0.84	-0.3
3,554,096	-		Dshi_3380	0.84	+0.3
3,554,118	+		Dshi_3380	0.87	+0.8
3,554,126	+		Dshi_3380	0.88	+0.1
3,554,126	-		Dshi_3380	0.88	+1.2
3,554,149	+				-0.2
3,554,149	+				-2.8
3,554,149	+				+1.1
3,554,149	+				-0.0
3,554,149	+				-0.2
3,554,149	+				+0.1
3,554,149	+				-0.5
3,554,149	+				-0.6
3,554,151	+				-0.4
3,554,151	+				-0.2
3,554,154	+				+0.2
3,554,157	-				+0.0
3,554,157	-				+0.2
3,554,157	-				-2.4
3,554,157	-				-1.6
3,554,157	-				-1.1
3,554,159	-				+0.3
3,554,201	+				-0.7
3,554,201	+				-0.4
3,554,209	-				-0.6
3,554,209	-				-1.1
3,554,214	-				+0.5
3,554,220	+				-1.7
3,554,230	+				-0.0
3,554,230	+				-0.2
3,554,230	+				-1.6
3,554,230	+				+0.3
3,554,230	+				+0.2
3,554,230	+				+0.9
3,554,230	+				+0.3
3,554,230	+				-2.8
3,554,230	+				-1.4
3,554,230	+				+0.5
3,554,238	-				+0.3
3,554,238	-				+0.1
3,554,238	-				-1.2
3,554,238	-				-0.5
3,554,238	-				+1.1
3,554,238	-				-3.2
3,554,238	-				+0.0
3,554,238	-				+0.8
3,554,238	-				-2.2
3,554,238	-				+1.6
3,554,247	+				+0.1
3,554,254	+				+0.8
3,554,255	-				-0.4
3,554,255	-				-1.3
3,554,260	-				+1.1
3,554,262	-				+0.2
3,554,262	-				+0.1
3,554,262	-				+1.2
3,554,268	+				-0.4
3,554,272	-				+1.3
3,554,276	-				+0.4
3,554,287	+				+0.2
3,554,324	+				-0.0
3,554,324	+				-0.1
3,554,324	+				-0.7
3,554,324	+				-0.2
3,554,324	+				-0.5
3,554,324	+				+0.0
3,554,324	+				+0.6
3,554,324	+				+0.0
3,554,324	+				-1.4
3,554,332	-				+1.6
3,554,332	-				-0.4
3,554,351	+				-0.1
3,554,366	+				-1.0
3,554,369	-				+0.7
3,554,374	-				+0.8
3,554,383	+				-0.4
3,554,391	-				+0.2
3,554,391	-				-0.5
3,554,391	-				-0.1
3,554,391	-				+0.9
3,554,397	-				+0.0
3,554,398	-				+0.8
3,554,413	-				+0.5
3,554,415	-				+1.9
3,554,464	+				-1.9
3,554,472	-				-2.8
3,554,483	+				-4.2
3,554,515	+				-0.6
3,554,540	+				-5.1
3,554,548	-				+0.1
3,554,574	+				-1.9
3,554,574	+				-2.8
3,554,641	-		Dshi_3381	0.13	-4.5
3,554,644	+		Dshi_3381	0.13	-2.3
3,554,644	+		Dshi_3381	0.13	-2.1
3,554,644	+		Dshi_3381	0.13	-2.1
3,554,644	+		Dshi_3381	0.13	-1.6
3,554,644	+		Dshi_3381	0.13	-2.7
3,554,645	+		Dshi_3381	0.13	-3.4
3,554,645	+		Dshi_3381	0.13	-0.8
3,554,645	+		Dshi_3381	0.13	-1.5
3,554,645	+		Dshi_3381	0.13	-2.9
3,554,645	+		Dshi_3381	0.13	-3.7
3,554,653	-		Dshi_3381	0.14	-1.8
3,554,653	-		Dshi_3381	0.14	-3.4
3,554,653	-		Dshi_3381	0.14	-2.5
3,554,653	-		Dshi_3381	0.14	-2.4
3,554,653	-		Dshi_3381	0.14	-3.5
3,554,661	-		Dshi_3381	0.14	-1.6
3,554,715	+		Dshi_3381	0.17	-4.0
3,554,759	+		Dshi_3381	0.20	-2.4
3,554,778	+		Dshi_3381	0.21	-2.6
3,554,778	+		Dshi_3381	0.21	-3.2
3,554,783	+		Dshi_3381	0.21	-3.1
3,554,820	-		Dshi_3381	0.23	-1.5
3,554,824	+		Dshi_3381	0.23	-3.2
3,554,824	+		Dshi_3381	0.23	-2.8
3,554,838	+		Dshi_3381	0.24	-3.7
3,554,882	+		Dshi_3381	0.27	-2.9
3,554,887	+		Dshi_3381	0.27	-3.2
3,554,887	+		Dshi_3381	0.27	-1.1
3,554,887	+		Dshi_3381	0.27	-5.7
3,554,887	+		Dshi_3381	0.27	-2.9
3,554,890	-		Dshi_3381	0.27	-2.5
3,554,895	-		Dshi_3381	0.27	-2.9
3,554,895	-		Dshi_3381	0.27	-2.7
3,554,924	+		Dshi_3381	0.29	-1.7
3,554,948	-		Dshi_3381	0.30	-3.2
3,554,960	+		Dshi_3381	0.31	-2.1
3,554,960	+		Dshi_3381	0.31	-2.2
3,554,963	-		Dshi_3381	0.31	-3.8
3,554,968	-		Dshi_3381	0.31	-1.4
3,555,011	-		Dshi_3381	0.34	-3.8
3,555,036	-		Dshi_3381	0.35	-1.6
3,555,045	-		Dshi_3381	0.36	+1.2
3,555,061	-		Dshi_3381	0.37	-1.6
3,555,067	-		Dshi_3381	0.37	-0.3
3,555,103	+		Dshi_3381	0.39	-2.1
3,555,113	+		Dshi_3381	0.39	-3.9
3,555,140	-		Dshi_3381	0.41	+3.6
3,555,140	-		Dshi_3381	0.41	-3.2
3,555,194	+		Dshi_3381	0.44	-1.8
3,555,202	-		Dshi_3381	0.44	-2.3
3,555,218	+		Dshi_3381	0.45	-2.7
3,555,229	-		Dshi_3381	0.46	-3.1
3,555,231	-		Dshi_3381	0.46	-3.8
3,555,242	-		Dshi_3381	0.47	-2.8
3,555,304	-		Dshi_3381	0.50	-4.3
3,555,328	+		Dshi_3381	0.52	+0.4
3,555,330	+		Dshi_3381	0.52	-3.6
3,555,333	-		Dshi_3381	0.52	-2.4
3,555,343	-		Dshi_3381	0.52	-0.8
3,555,371	+		Dshi_3381	0.54	-2.2
3,555,456	+		Dshi_3381	0.59	-1.7
3,555,456	+		Dshi_3381	0.59	-1.8
3,555,458	+		Dshi_3381	0.59	-0.8
3,555,472	+		Dshi_3381	0.60	-2.9
3,555,475	-		Dshi_3381	0.60	-1.0
3,555,525	+		Dshi_3381	0.63	-3.3
3,555,548	-		Dshi_3381	0.64	-2.1
3,555,564	-		Dshi_3381	0.65	-2.1
3,555,617	+		Dshi_3381	0.68	-1.4
3,555,617	+		Dshi_3381	0.68	-2.2
3,555,618	+		Dshi_3381	0.68	-4.1
3,555,618	+		Dshi_3381	0.68	-5.0
3,555,623	+		Dshi_3381	0.68	-1.8
3,555,626	-		Dshi_3381	0.68	-0.4
3,555,626	-		Dshi_3381	0.68	-3.8
3,555,667	+		Dshi_3381	0.71	-2.7
3,555,699	+		Dshi_3381	0.72	-2.7
3,555,705	+		Dshi_3381	0.73	-2.2
3,555,740	-		Dshi_3381	0.75	-3.1
3,555,785	-		Dshi_3381	0.77	-3.5
3,555,834	-		Dshi_3381	0.80	-4.1
3,555,866	-		Dshi_3381	0.82	-2.2
3,555,868	+		Dshi_3381	0.82	-4.1
3,555,869	+		Dshi_3381	0.82	-0.9
3,555,876	-		Dshi_3381	0.82	-3.0
3,555,951	+		Dshi_3381	0.86	-1.1
3,555,969	+		Dshi_3381	0.87	-2.6
3,555,996	-		Dshi_3381	0.89	-1.7
3,556,038	-				-3.7
3,556,089	+				-1.2
3,556,097	-				-4.1
3,556,099	+				-2.8
3,556,112	+				-2.9
3,556,130	+				-1.8
3,556,130	+				-1.8
3,556,130	+				-2.2
3,556,138	-				-2.6
3,556,138	-				-1.8
3,556,152	+				-3.3
3,556,155	-				-1.4
3,556,162	+				-2.7
3,556,205	+				-3.5
3,556,241	-				-4.9
3,556,289	-				-1.5
3,556,315	-				-2.8
3,556,330	-				-1.9
3,556,332	+				-1.9
3,556,335	-				-3.9
3,556,344	+				-1.9
3,556,344	+				-2.6
3,556,352	-				-2.6
3,556,352	-				-3.1
3,556,384	-				-4.7
3,556,417	+				-3.8
3,556,422	+				-1.6
3,556,438	+				-2.6
3,556,444	-				-1.4
3,556,446	-				-2.6
3,556,451	+				-3.8
3,556,459	-				-2.9
3,556,459	-				-2.4
3,556,643	+		Dshi_3382	0.14	-1.9
3,556,714	-		Dshi_3382	0.16	-2.0
3,556,728	+		Dshi_3382	0.17	-2.9
3,556,829	+		Dshi_3382	0.20	-1.6
3,556,934	+		Dshi_3382	0.23	+0.1
3,556,935	-		Dshi_3382	0.23	-1.0
3,556,942	-		Dshi_3382	0.23	-3.2
3,556,942	-		Dshi_3382	0.23	-4.2
3,556,949	-		Dshi_3382	0.23	-1.2
3,556,977	-		Dshi_3382	0.24	-3.2
3,556,984	-		Dshi_3382	0.24	-3.2
3,557,019	+		Dshi_3382	0.25	-3.2
3,557,027	+		Dshi_3382	0.26	-2.9
3,557,048	+		Dshi_3382	0.26	-1.1
3,557,056	+		Dshi_3382	0.27	-4.2
3,557,108	-		Dshi_3382	0.28	-1.8