Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2792 and Dshi_2793 overlap by 4 nucleotides Dshi_2793 and Dshi_2794 are separated by 22 nucleotides
Dshi_2792: Dshi_2792 - toxic anion resistance family protein (RefSeq), at 2,950,980 to 2,952,173
_2792
Dshi_2793: Dshi_2793 - lipoprotein, putative (RefSeq), at 2,952,170 to 2,953,117
_2793
Dshi_2794: Dshi_2794 - hypothetical protein (RefSeq), at 2,953,140 to 2,954,270
_2794
Position (kb)
2952
2953
2954 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2951.191 kb on - strand, within Dshi_2792 at 2951.247 kb on + strand, within Dshi_2792 at 2951.390 kb on + strand, within Dshi_2792 at 2951.390 kb on + strand, within Dshi_2792 at 2951.447 kb on + strand, within Dshi_2792 at 2951.565 kb on - strand, within Dshi_2792 at 2951.587 kb on - strand, within Dshi_2792 at 2951.608 kb on + strand, within Dshi_2792 at 2951.623 kb on + strand, within Dshi_2792 at 2951.696 kb on + strand, within Dshi_2792 at 2951.778 kb on + strand, within Dshi_2792 at 2951.780 kb on + strand, within Dshi_2792 at 2951.788 kb on - strand, within Dshi_2792 at 2951.794 kb on - strand, within Dshi_2792 at 2951.813 kb on + strand, within Dshi_2792 at 2951.847 kb on + strand, within Dshi_2792 at 2952.009 kb on + strand, within Dshi_2792 at 2952.127 kb on - strand at 2952.147 kb on + strand at 2952.470 kb on - strand, within Dshi_2793 at 2952.470 kb on - strand, within Dshi_2793 at 2952.581 kb on + strand, within Dshi_2793 at 2952.581 kb on + strand, within Dshi_2793 at 2952.581 kb on + strand, within Dshi_2793 at 2952.589 kb on - strand, within Dshi_2793 at 2952.589 kb on - strand, within Dshi_2793 at 2952.667 kb on + strand, within Dshi_2793 at 2952.817 kb on - strand, within Dshi_2793 at 2952.833 kb on + strand, within Dshi_2793 at 2952.918 kb on + strand, within Dshi_2793 at 2952.947 kb on - strand, within Dshi_2793 at 2952.960 kb on - strand, within Dshi_2793 at 2953.089 kb on + strand at 2953.121 kb on - strand at 2953.260 kb on + strand, within Dshi_2794 at 2953.365 kb on + strand, within Dshi_2794 at 2953.377 kb on + strand, within Dshi_2794 at 2953.445 kb on + strand, within Dshi_2794 at 2953.517 kb on - strand, within Dshi_2794 at 2953.542 kb on - strand, within Dshi_2794 at 2953.605 kb on + strand, within Dshi_2794 at 2953.712 kb on + strand, within Dshi_2794 at 2953.826 kb on - strand, within Dshi_2794 at 2953.842 kb on + strand, within Dshi_2794 at 2954.048 kb on + strand, within Dshi_2794
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 2,951,191 - Dshi_2792 0.18 +0.8 2,951,247 + Dshi_2792 0.22 -1.1 2,951,390 + Dshi_2792 0.34 +0.4 2,951,390 + Dshi_2792 0.34 -1.0 2,951,447 + Dshi_2792 0.39 +0.6 2,951,565 - Dshi_2792 0.49 -0.8 2,951,587 - Dshi_2792 0.51 -0.6 2,951,608 + Dshi_2792 0.53 -0.6 2,951,623 + Dshi_2792 0.54 -1.7 2,951,696 + Dshi_2792 0.60 -0.9 2,951,778 + Dshi_2792 0.67 -0.6 2,951,780 + Dshi_2792 0.67 +1.6 2,951,788 - Dshi_2792 0.68 -0.6 2,951,794 - Dshi_2792 0.68 -1.2 2,951,813 + Dshi_2792 0.70 -2.1 2,951,847 + Dshi_2792 0.73 +0.0 2,952,009 + Dshi_2792 0.86 -0.5 2,952,127 - +0.1 2,952,147 + +1.2 2,952,470 - Dshi_2793 0.32 -0.3 2,952,470 - Dshi_2793 0.32 -0.7 2,952,581 + Dshi_2793 0.43 -1.9 2,952,581 + Dshi_2793 0.43 -0.2 2,952,581 + Dshi_2793 0.43 -1.0 2,952,589 - Dshi_2793 0.44 -1.0 2,952,589 - Dshi_2793 0.44 -0.8 2,952,667 + Dshi_2793 0.52 +0.5 2,952,817 - Dshi_2793 0.68 -0.8 2,952,833 + Dshi_2793 0.70 -1.1 2,952,918 + Dshi_2793 0.79 -1.0 2,952,947 - Dshi_2793 0.82 -0.3 2,952,960 - Dshi_2793 0.83 -1.9 2,953,089 + -0.6 2,953,121 - +3.2 2,953,260 + Dshi_2794 0.11 -1.2 2,953,365 + Dshi_2794 0.20 -0.4 2,953,377 + Dshi_2794 0.21 -0.4 2,953,445 + Dshi_2794 0.27 -0.6 2,953,517 - Dshi_2794 0.33 +0.1 2,953,542 - Dshi_2794 0.36 +0.2 2,953,605 + Dshi_2794 0.41 -1.1 2,953,712 + Dshi_2794 0.51 -0.4 2,953,826 - Dshi_2794 0.61 +0.7 2,953,842 + Dshi_2794 0.62 -0.8 2,954,048 + Dshi_2794 0.80 +0.3
Or see this region's nucleotide sequence