Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2311

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
2,438,772	-		Dshi_2310	0.27	-2.7
2,438,782	-		Dshi_2310	0.28	-1.0
2,438,800	-		Dshi_2310	0.29	+0.4
2,438,826	+		Dshi_2310	0.32	-0.3
2,438,852	-		Dshi_2310	0.34	-2.0
2,439,098	-		Dshi_2310	0.57	-1.4
2,439,118	+		Dshi_2310	0.59	-0.4
2,439,180	+		Dshi_2310	0.65	+1.1
2,439,185	+		Dshi_2310	0.65	+0.2
2,439,188	-		Dshi_2310	0.65	-0.7
2,439,193	+		Dshi_2310	0.66	+0.1
2,439,193	+		Dshi_2310	0.66	-3.4
2,439,193	-		Dshi_2310	0.66	+1.1
2,439,224	-		Dshi_2310	0.69	-0.9
2,439,286	+		Dshi_2310	0.74	-1.7
2,439,330	-		Dshi_2310	0.79	-0.1
2,439,365	-		Dshi_2310	0.82	-0.2
2,439,373	-		Dshi_2310	0.83	-2.0
2,439,408	+		Dshi_2310	0.86	-0.1
2,439,460	+				-1.0
2,439,507	+				+0.6
2,439,585	-				-0.8
2,439,589	+				+0.0
2,439,644	+				+0.3
2,439,679	+				-2.3
2,439,697	+				-2.6
2,439,705	-				-0.0
2,439,719	+				-0.0
2,439,720	-				-0.2
2,439,817	-				+0.5
2,439,962	+				+0.1
2,439,996	+				+0.3
2,439,996	+				+0.4
2,440,053	-				-1.0
2,440,056	-				-2.3
2,440,072	-				-0.5
2,440,077	+				+0.2
2,440,085	-				+1.1
2,440,103	-				+0.8
2,440,161	+		Dshi_2311	0.11	-0.8
2,440,223	-		Dshi_2311	0.13	-0.4
2,440,295	-		Dshi_2311	0.15	+0.6
2,440,313	-		Dshi_2311	0.15	+0.7
2,440,313	-		Dshi_2311	0.15	-0.3
2,440,324	-		Dshi_2311	0.16	-0.3
2,440,382	-		Dshi_2311	0.17	-0.7
2,440,411	+		Dshi_2311	0.18	-0.4
2,440,480	+		Dshi_2311	0.20	-0.7
2,440,495	-		Dshi_2311	0.20	-0.3
2,440,512	+		Dshi_2311	0.21	+0.4
2,440,568	+		Dshi_2311	0.22	-0.2
2,440,575	-		Dshi_2311	0.23	-0.0
2,440,692	-		Dshi_2311	0.26	+0.1
2,440,693	+		Dshi_2311	0.26	-0.6
2,440,701	-		Dshi_2311	0.26	-0.0
2,440,757	-		Dshi_2311	0.28	-0.7
2,440,791	-		Dshi_2311	0.28	+0.5
2,440,796	+		Dshi_2311	0.29	-0.3
2,440,814	-		Dshi_2311	0.29	+0.3
2,440,895	+		Dshi_2311	0.31	-0.0
2,440,902	-		Dshi_2311	0.32	-0.4
2,440,922	+		Dshi_2311	0.32	+0.2
2,440,965	+		Dshi_2311	0.33	+0.4
2,440,965	+		Dshi_2311	0.33	-0.3
2,440,973	-		Dshi_2311	0.33	-0.1
2,440,973	-		Dshi_2311	0.33	+0.9
2,440,973	-		Dshi_2311	0.33	-1.5
2,440,973	-		Dshi_2311	0.33	-0.9
2,440,991	-		Dshi_2311	0.34	+0.6
2,441,012	-		Dshi_2311	0.35	+0.3
2,441,123	-		Dshi_2311	0.38	-0.5
2,441,124	+		Dshi_2311	0.38	-1.7
2,441,166	+		Dshi_2311	0.39	-0.6
2,441,176	+		Dshi_2311	0.39	-1.1
2,441,203	+		Dshi_2311	0.40	+0.3
2,441,318	+		Dshi_2311	0.43	-0.3
2,441,460	-		Dshi_2311	0.47	-1.4
2,441,568	-		Dshi_2311	0.50	+0.0
2,441,778	+		Dshi_2311	0.55	-2.3
2,441,849	-		Dshi_2311	0.57	-0.3
2,441,870	-		Dshi_2311	0.58	+0.4
2,441,870	-		Dshi_2311	0.58	-0.1
2,441,926	+		Dshi_2311	0.59	+0.0
2,441,996	-		Dshi_2311	0.61	+3.0
2,442,000	+		Dshi_2311	0.61	-0.4
2,442,020	-		Dshi_2311	0.62	-0.6
2,442,020	-		Dshi_2311	0.62	-1.2
2,442,059	-		Dshi_2311	0.63	+0.8
2,442,171	+		Dshi_2311	0.66	-0.5
2,442,203	+		Dshi_2311	0.67	+1.5
2,442,216	-		Dshi_2311	0.67	-0.2
2,442,319	-		Dshi_2311	0.70	-0.1
2,442,334	-		Dshi_2311	0.71	-0.7
2,442,340	+		Dshi_2311	0.71	-1.1
2,442,349	+		Dshi_2311	0.71	-0.9
2,442,427	+		Dshi_2311	0.73	-3.7
2,442,451	+		Dshi_2311	0.74	+0.0
2,442,469	-		Dshi_2311	0.74	+0.5
2,442,518	+		Dshi_2311	0.76	+2.5
2,442,561	-		Dshi_2311	0.77	-1.9
2,442,576	-		Dshi_2311	0.77	-1.7
2,442,610	+		Dshi_2311	0.78	+0.2
2,442,670	-		Dshi_2311	0.80	-0.0
2,442,732	-		Dshi_2311	0.81	-0.7
2,442,768	+		Dshi_2311	0.82	-0.1
2,442,805	-		Dshi_2311	0.83	-1.5
2,442,807	+		Dshi_2311	0.83	+2.2
2,442,812	+		Dshi_2311	0.84	+0.3
2,442,822	+		Dshi_2311	0.84	-2.6
2,442,834	+		Dshi_2311	0.84	+0.8
2,442,872	+		Dshi_2311	0.85	-0.2
2,442,889	-		Dshi_2311	0.86	-0.6
2,443,024	+		Dshi_2311	0.89	-0.7
2,443,037	-		Dshi_2311	0.90	+1.7
2,443,037	-		Dshi_2311	0.90	-0.7
2,443,105	+				-0.4
2,443,113	-				-0.7
2,443,159	+				-0.3
2,443,192	+				+0.9
2,443,192	+				-0.9
2,443,198	+				-0.6
2,443,200	-				-0.6
2,443,261	+				-4.2
2,443,273	+				-0.4
2,443,280	-				+0.5
2,443,280	-				-1.1
2,443,327	-				-0.5
2,443,330	+				+1.9
2,443,330	+				-1.2
2,443,330	+				+0.0
2,443,330	+				-1.2
2,443,334	+				+0.6
2,443,334	-				-0.2
2,443,334	-				+0.1
2,443,353	-				+0.0
2,443,353	-				-1.7
2,443,367	+				-0.7
2,443,418	+				-1.7
2,443,426	-				-0.3
2,443,426	-				+0.3
2,443,428	+				-0.1
2,443,446	-				-0.3
2,443,457	-				-0.1
2,443,457	-				+0.0
2,443,458	-				+1.1
2,443,460	+				-0.4
2,443,460	+				-0.8
2,443,460	+				+0.4
2,443,460	+				-0.0
2,443,460	+				+0.4
2,443,460	+				-0.4
2,443,460	+				-0.6
2,443,460	+				+0.4
2,443,460	+				-0.5
2,443,468	-				+0.0
2,443,468	-				-0.4
2,443,468	-				-0.2
2,443,468	-				-0.7
2,443,468	-				+0.9
2,443,468	-				+0.0
2,443,468	-				+0.1
2,443,468	-				+2.1
2,443,468	-				-1.2
2,443,468	-				+1.1
2,443,468	-				-0.0
2,443,468	-				+0.7
2,443,468	-				-0.2
2,443,468	-				-0.1
2,443,468	-				+1.7
2,443,468	-				-0.1
2,443,468	-				+0.3
2,443,468	-				+0.1
2,443,468	-				+0.1
2,443,468	-				-1.8
2,443,468	-				-1.4
2,443,468	-				+0.2
2,443,468	-				-0.1
2,443,468	-				+0.9
2,443,470	+				+0.3
2,443,470	+				-1.1
2,443,470	+				-0.5
2,443,470	+				+0.2
2,443,470	+				+0.6
2,443,470	+				+0.5
2,443,472	+				+0.3
2,443,472	+				-0.6
2,443,472	+				-0.7
2,443,477	+				-0.4
2,443,478	-				+1.5
2,443,478	-				-0.6
2,443,478	-				+1.3
2,443,478	-				-0.3
2,443,478	-				-0.9
2,443,480	-				+0.0
2,443,495	+				+0.0
2,443,495	+				+0.8
2,443,503	-				+1.1
2,443,503	-				+0.6
2,443,535	-				-1.5
2,443,572	+				-0.3
2,443,572	+				+0.4
2,443,572	+				-0.4
2,443,572	+				-1.3
2,443,580	+				+0.1
2,443,580	-				+0.5
2,443,580	-				-0.5
2,443,580	-				-0.1
2,443,580	-				-0.1
2,443,580	-				+0.4
2,443,580	-				+0.7
2,443,580	-				+1.3
2,443,580	-				-0.4
2,443,580	-				-1.0
2,443,580	-				+0.1
2,443,580	-				-1.3
2,443,587	+				-1.1
2,443,587	+				+0.9
2,443,587	+				+2.1
2,443,615	+				-0.3
2,443,622	+				+0.3
2,443,623	+				-0.5
2,443,623	+				-0.7
2,443,623	+				+0.7
2,443,628	+				+1.1
2,443,630	-				-0.9
2,443,631	-				+0.3
2,443,631	-				+0.1
2,443,631	-				-0.9
2,443,631	-				+0.3
2,443,631	-				-1.4
2,443,632	+				-0.6
2,443,633	+				-0.3
2,443,633	+				-0.1
2,443,633	+				-1.0
2,443,633	+				+0.8
2,443,633	+				-0.4
2,443,633	+				+0.2
2,443,633	+				-1.7
2,443,641	-				-0.1
2,443,641	-				+0.0
2,443,641	-				+0.1
2,443,641	-				+0.7
2,443,641	-				-0.0
2,443,641	-				+0.1
2,443,641	-				-2.8
2,443,641	-				-0.3
2,443,641	-				-0.1
2,443,677	+				+3.1
2,443,677	+				+0.8
2,443,690	-				-2.3
2,443,695	-				+0.0
2,443,698	+				-1.0
2,443,709	+				-1.5
2,443,728	+				-0.4
2,443,748	-				+0.5
2,443,759	+				+0.1
2,443,759	+				-0.7
2,443,759	+				-0.2
2,443,759	+				+0.7
2,443,759	+				-0.9
2,443,767	-				-0.1
2,443,767	-				+0.7
2,443,767	-				+0.3
2,443,769	+				-0.1
2,443,772	-				-0.9
2,443,810	+				-0.8
2,443,812	+				+0.2
2,443,812	+				-0.2
2,443,812	+				-0.6
2,443,817	+				-0.9
2,443,820	-				+0.0
2,443,820	-				-0.2
2,443,825	-				+0.7
2,443,886	-				+1.1
2,443,888	+				-1.1
2,443,891	-				-1.9
2,443,895	+				+3.0
2,443,895	+				-0.5
2,443,896	-				+0.6
2,443,903	-				+1.7
2,443,931	-		Dshi_2312	0.10	+0.1
2,443,943	-		Dshi_2312	0.13	-0.4
2,443,944	-		Dshi_2312	0.13	-2.2
2,443,954	+		Dshi_2312	0.15	-1.7
2,443,968	-		Dshi_2312	0.18	-2.6
2,444,005	-		Dshi_2312	0.25	+0.2
2,444,012	+		Dshi_2312	0.26	-2.0
2,444,020	-		Dshi_2312	0.28	-0.6
2,444,025	+		Dshi_2312	0.29	-0.9
2,444,034	+		Dshi_2312	0.30	+1.1
2,444,112	+		Dshi_2312	0.46	+1.1
2,444,136	+		Dshi_2312	0.50	-0.1
2,444,146	+		Dshi_2312	0.52	-0.2
2,444,146	+		Dshi_2312	0.52	-0.4
2,444,146	+		Dshi_2312	0.52	-1.2
2,444,154	-		Dshi_2312	0.54	-1.7
2,444,154	-		Dshi_2312	0.54	+0.7
2,444,157	+		Dshi_2312	0.54	+0.4
2,444,176	-		Dshi_2312	0.58	-0.6
2,444,191	-		Dshi_2312	0.61	-0.3
2,444,229	-		Dshi_2312	0.68	+0.2
2,444,233	-		Dshi_2312	0.69	-0.2
2,444,241	-		Dshi_2312	0.71	-2.4
2,444,284	+		Dshi_2312	0.79	+0.7
2,444,286	+		Dshi_2312	0.79	+0.5
2,444,286	+		Dshi_2312	0.79	-0.5
2,444,299	-		Dshi_2312	0.82	-1.0
2,444,317	+		Dshi_2312	0.85	-1.0
2,444,334	+		Dshi_2312	0.89	-0.3
2,444,342	-				-0.4
2,444,386	-				-1.4