Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0008

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
9,858	-				-0.5
9,866	-				-0.5
9,880	+				+0.1
9,880	+				-0.6
9,880	+				-0.5
9,885	+				-0.3
9,885	+				+1.2
9,888	-				-0.1
9,888	-				-0.7
9,890	+				+0.3
9,890	+				+0.8
9,895	+				+0.2
9,898	-				+1.7
9,900	-				-1.3
9,903	-				-0.1
9,913	-				+0.7
9,913	-				+0.2
9,915	+				-0.1
9,915	+				+1.4
9,917	+				+0.6
9,923	-				-1.8
9,924	-				-0.0
9,958	-				-0.8
9,959	-				+0.2
9,967	-				+0.3
9,972	+				-0.8
9,972	+				-0.1
9,972	+				+0.2
9,979	-				-0.1
9,980	-				+0.8
9,980	-				-0.3
9,980	-				-0.1
9,980	-				-0.6
9,980	-				+0.0
9,980	-				-0.5
9,980	-				+1.0
9,980	-				+1.5
9,980	-				-0.3
9,980	-				+0.1
9,985	+				-2.4
9,988	-				+0.7
9,988	-				+1.0
10,040	+				+0.3
10,049	-				-0.1
10,049	-				-2.5
10,070	-				-0.4
10,083	-				-0.5
10,121	+				-0.7
10,124	+				-0.3
10,125	+				+0.8
10,125	+				+1.2
10,131	-				+0.0
10,132	-				-0.5
10,135	+				-0.2
10,158	+				+0.2
10,180	+				+0.4
10,189	+				-0.8
10,189	+				-2.1
10,197	-				-0.1
10,197	-				-1.7
10,234	+				-0.7
10,242	-				+2.1
10,242	-				-1.7
10,254	+				+1.1
10,259	+				-0.1
10,267	-				+0.0
10,269	+				-0.3
10,324	-				+0.2
10,326	-				-1.5
10,328	+				-0.1
10,328	+				-1.3
10,328	+				-0.6
10,331	-				+0.2
10,333	+				-0.8
10,333	+				-0.5
10,333	+				-0.1
10,333	+				-0.7
10,333	+				-1.0
10,333	+				-0.7
10,333	+				-0.4
10,333	+				+1.2
10,333	+				+1.8
10,333	+				-2.1
10,333	+				+0.6
10,336	-				+0.5
10,336	-				-0.5
10,340	-				+1.5
10,340	-				-0.4
10,341	-				+0.8
10,341	-				-0.5
10,341	-				-0.6
10,341	-				+1.2
10,341	-				-1.0
10,341	-				-2.1
10,341	-				+0.8
10,341	-				-0.5
10,341	-				+0.5
10,341	-				-2.0
10,341	-				-0.2
10,345	+				-0.0
10,353	-				+0.2
10,355	+				-0.5
10,361	+				+0.3
10,363	-				+0.2
10,366	+				+0.9
10,366	+				+0.3
10,366	+				-0.1
10,369	+				-0.7
10,374	+				+0.7
10,390	+				-1.0
10,390	+				+0.2
10,390	+				+0.5
10,390	+				-0.8
10,392	+				+0.0
10,392	+				-0.5
10,392	+				+0.7
10,392	+				+1.0
10,392	+				+0.8
10,392	+				-1.6
10,392	+				-0.2
10,392	+				+0.3
10,392	+				+0.4
10,392	+				+0.8
10,392	+				+0.9
10,392	+				-0.8
10,392	+				+0.0
10,392	+				-1.3
10,392	+				-1.4
10,392	+				-0.0
10,392	+				+0.8
10,392	+				-1.0
10,392	+				-1.0
10,396	+				-1.5
10,398	-				-1.2
10,398	-				-0.2
10,398	-				-0.3
10,398	-				-1.3
10,398	-				-1.4
10,398	-				-0.0
10,398	-				-2.0
10,398	-				-0.5
10,399	+				-1.3
10,399	+				-1.3
10,399	+				+0.2
10,399	+				-0.7
10,399	+				-1.1
10,400	-				+2.0
10,400	-				+0.2
10,400	-				-0.6
10,400	-				+0.5
10,400	-				-0.7
10,400	-				-0.1
10,400	-				+0.4
10,400	-				-1.0
10,400	-				-0.6
10,402	+				+0.3
10,402	+				+0.9
10,402	-				+0.3
10,404	+				-1.2
10,407	-				-1.3
10,407	-				+1.3
10,407	-				+0.6
10,407	-				+0.0
10,407	-				+0.6
10,407	-				-0.5
10,407	-				-1.5
10,407	-				-1.4
10,407	-				-0.9
10,407	-				-0.0
10,407	-				+1.1
10,410	-				+1.0
10,410	-				+0.5
10,417	+				-1.5
10,425	-				+1.0
10,430	-				-0.2
10,434	+				+0.4
10,444	+				+0.2
10,448	+				-0.0
10,449	+				+2.2
10,449	+				-0.7
10,457	-				+0.0
10,463	-				-0.2
10,463	-				-0.4
10,478	-				+0.4
10,511	+				-3.2
10,535	+				-0.5
10,562	-				-0.0
10,587	+				+0.3
10,617	-				-0.6
10,619	-				+0.1
10,627	+				-0.0
10,634	-				+0.6
10,635	-				-0.6
10,673	+				+0.3
10,673	+				-0.1
10,675	+				-0.2
10,681	-				-0.3
10,681	-				-2.0
10,685	+				-1.1
10,685	+				-0.9
10,687	+				+1.3
10,695	-				-0.2
10,702	+				+0.1
10,705	-				+1.8
10,707	+				-0.5
10,707	+				-0.6
10,709	+				+0.1
10,709	+				+0.5
10,710	-				-0.4
10,715	-				-0.8
10,715	-				-0.4
10,717	-				-1.8
10,717	-				+0.2
10,717	-				+0.2
10,717	-				-0.4
10,721	+				-1.1
10,721	+				-0.2
10,721	+				+0.4
10,722	+				-0.8
10,722	+				+1.5
10,722	+				-0.5
10,722	+				+0.9
10,722	+				-0.8
10,722	+				+0.1
10,722	+				+2.4
10,722	-				+0.3
10,722	-				+0.3
10,729	-				-1.0
10,729	-				+0.9
10,729	-				-1.5
10,730	-				-0.3
10,730	-				-0.1
10,730	-				-1.2
10,730	-				-0.6
10,730	-				+1.1
10,730	-				-0.4
10,730	-				-0.6
10,733	+				-0.2
10,741	-		Dshi_0008	0.10	+0.1
10,745	-		Dshi_0008	0.11	-1.1
10,749	-		Dshi_0008	0.12	-3.2
10,750	-		Dshi_0008	0.12	-0.5
10,750	-		Dshi_0008	0.12	-1.0
10,751	+		Dshi_0008	0.12	+0.1
10,751	+		Dshi_0008	0.12	-0.2
10,751	-		Dshi_0008	0.12	+0.0
10,757	+		Dshi_0008	0.13	-1.1
10,757	+		Dshi_0008	0.13	-0.6
10,757	+		Dshi_0008	0.13	+0.2
10,757	+				-1.1
10,759	-		Dshi_0008	0.13	-1.1
10,759	-		Dshi_0008	0.13	-1.8
10,759	-		Dshi_0008	0.13	+1.5
10,759	-		Dshi_0008	0.13	-0.6
10,759	-		Dshi_0008	0.13	+1.8
10,762	+		Dshi_0008	0.14	+0.2
10,765	-		Dshi_0008	0.14	-0.2
10,765	-		Dshi_0008	0.14	-0.7
10,765	-		Dshi_0008	0.14	-0.3
10,767	+		Dshi_0008	0.15	-0.2
10,776	-		Dshi_0008	0.16	+0.3
10,787	-		Dshi_0008	0.18	-0.3
10,787	-		Dshi_0008	0.18	-0.0
10,794	-		Dshi_0008	0.19	-0.4
10,803	-		Dshi_0008	0.21	-0.2
10,804	-		Dshi_0008	0.21	-3.6
10,819	-		Dshi_0008	0.24	-0.7
10,821	+		Dshi_0008	0.24	-0.6
10,835	-		Dshi_0008	0.27	-0.5
10,838	+		Dshi_0008	0.27	-0.0
10,843	+		Dshi_0008	0.28	-0.3
10,851	-		Dshi_0008	0.29	-0.5
10,861	-		Dshi_0008	0.31	+0.9
10,866	-		Dshi_0008	0.32	-2.1
10,869	+		Dshi_0008	0.32	-0.1
10,869	+		Dshi_0008	0.32	-0.5
10,876	-		Dshi_0008	0.34	-0.2
10,876	-		Dshi_0008	0.34	-0.2
10,876	-		Dshi_0008	0.34	+0.2
10,877	-		Dshi_0008	0.34	-0.2
10,877	-		Dshi_0008	0.34	-2.0
10,879	+		Dshi_0008	0.34	-2.0
10,879	+		Dshi_0008	0.34	+0.1
10,882	-		Dshi_0008	0.35	+0.5
10,887	-		Dshi_0008	0.36	-0.7
10,888	+		Dshi_0008	0.36	-0.3
10,888	+		Dshi_0008	0.36	-1.9
10,888	+		Dshi_0008	0.36	+0.1
10,896	-		Dshi_0008	0.37	-0.1
10,908	+		Dshi_0008	0.39	-0.0
10,908	+		Dshi_0008	0.39	-0.8
10,908	+		Dshi_0008	0.39	+0.2
10,908	+		Dshi_0008	0.39	-0.2
10,908	+		Dshi_0008	0.39	+0.1
10,916	-		Dshi_0008	0.41	-0.0
10,916	-		Dshi_0008	0.41	+0.2
10,918	+		Dshi_0008	0.41	-1.0
10,918	+		Dshi_0008	0.41	-0.2
10,918	+		Dshi_0008	0.41	+0.6
10,918	+		Dshi_0008	0.41	+0.2
10,918	+		Dshi_0008	0.41	+0.0
10,918	+		Dshi_0008	0.41	+0.4
10,919	+		Dshi_0008	0.41	+0.2
10,919	+		Dshi_0008	0.41	+0.1
10,922	+		Dshi_0008	0.42	+0.5
10,922	+		Dshi_0008	0.42	-0.0
10,922	+		Dshi_0008	0.42	+0.6
10,922	+		Dshi_0008	0.42	+0.4
10,926	-		Dshi_0008	0.42	-0.1
10,926	-		Dshi_0008	0.42	+0.0
10,927	-		Dshi_0008	0.43	-0.2
10,946	+		Dshi_0008	0.46	+0.4
10,963	+		Dshi_0008	0.49	-2.5
10,970	+		Dshi_0008	0.50	-3.1
10,971	-		Dshi_0008	0.50	-0.9
10,971	-		Dshi_0008	0.50	-2.7
10,973	-		Dshi_0008	0.51	-0.4
10,978	-		Dshi_0008	0.51	+0.8
10,980	-		Dshi_0008	0.52	-0.0
10,981	+		Dshi_0008	0.52	-1.3
10,982	-		Dshi_0008	0.52	+0.5
10,985	+		Dshi_0008	0.53	-0.1
11,012	+		Dshi_0008	0.57	-0.1
11,014	+		Dshi_0008	0.58	-1.6
11,014	+		Dshi_0008	0.58	+0.2
11,014	-		Dshi_0008	0.58	+0.5
11,022	-		Dshi_0008	0.59	-0.1
11,022	-		Dshi_0008	0.59	+0.9
11,025	-		Dshi_0008	0.60	-0.9
11,025	-		Dshi_0008	0.60	-0.2
11,025	-		Dshi_0008	0.60	-0.2
11,027	+		Dshi_0008	0.60	-0.8
11,032	+		Dshi_0008	0.61	-0.2
11,032	+		Dshi_0008	0.61	+0.0
11,032	+		Dshi_0008	0.61	+0.2
11,033	-		Dshi_0008	0.61	+0.6
11,035	-		Dshi_0008	0.61	-0.1
11,035	-		Dshi_0008	0.61	-1.1
11,035	-		Dshi_0008	0.61	+0.1
11,036	-		Dshi_0008	0.62	-0.9
11,042	+		Dshi_0008	0.63	+0.5
11,042	+		Dshi_0008	0.63	-1.5
11,042	+		Dshi_0008	0.63	-0.5
11,042	+		Dshi_0008	0.63	+0.1
11,042	+		Dshi_0008	0.63	-1.1
11,042	+		Dshi_0008	0.63	+0.5
11,042	+		Dshi_0008	0.63	-0.1
11,042	+		Dshi_0008	0.63	-0.4
11,042	+		Dshi_0008	0.63	-2.3
11,042	+		Dshi_0008	0.63	-0.4
11,042	+		Dshi_0008	0.63	-1.0
11,042	+		Dshi_0008	0.63	-0.4
11,042	+		Dshi_0008	0.63	+0.9
11,042	+		Dshi_0008	0.63	-1.4
11,042	+		Dshi_0008	0.63	+0.2
11,042	+		Dshi_0008	0.63	+0.5
11,042	+		Dshi_0008	0.63	-0.7
11,042	+		Dshi_0008	0.63	+0.2
11,048	-		Dshi_0008	0.64	+0.2
11,050	-		Dshi_0008	0.64	+0.4
11,050	-		Dshi_0008	0.64	+0.9
11,050	-		Dshi_0008	0.64	-0.3
11,050	-		Dshi_0008	0.64	-0.3
11,050	-		Dshi_0008	0.64	-0.2
11,050	-		Dshi_0008	0.64	+0.5
11,050	-		Dshi_0008	0.64	+0.7
11,050	-		Dshi_0008	0.64	-0.7
11,069	+		Dshi_0008	0.67	+0.7
11,069	+		Dshi_0008	0.67	-0.2
11,071	+		Dshi_0008	0.68	+0.4
11,071	+		Dshi_0008	0.68	-0.9
11,071	+		Dshi_0008	0.68	+0.9
11,079	-		Dshi_0008	0.69	-0.0
11,108	+				+0.6
11,113	+		Dshi_0008	0.75	-0.4
11,113	+		Dshi_0008	0.75	+0.0
11,113	+		Dshi_0008	0.75	-0.0
11,113	+		Dshi_0008	0.75	-0.8
11,113	-		Dshi_0008	0.75	+0.1
11,141	-		Dshi_0008	0.80	+0.8
11,168	-		Dshi_0008	0.85	-1.0
11,178	-		Dshi_0008	0.86	+0.4
11,192	+		Dshi_0008	0.89	-0.0
11,192	+		Dshi_0008	0.89	+0.6
11,192	-		Dshi_0008	0.89	+0.2
11,197	+		Dshi_0008	0.90	-0.1
11,205	-				+0.5
11,267	+				-0.1
11,267	+				-0.1
11,267	+				+0.4
11,272	+				-0.8
11,275	-				-1.6
11,331	+				+0.2
11,332	+				+1.0
11,351	+				-0.2
11,375	+				-0.1
11,375	+				+3.2
11,375	+				+0.8
11,375	+				+0.2
11,375	+				-0.2
11,375	+				-0.1
11,375	+				+0.2
11,375	+				+0.1
11,375	+				+0.1
11,375	+				-0.2
11,375	+				+1.2
11,375	+				-1.0
11,375	+				-0.7
11,375	+				+0.0
11,375	+				-0.2
11,375	+				-0.3
11,375	+				-0.9
11,375	+				+0.8
11,375	+				+1.2
11,375	+				-0.1
11,375	+				-1.0
11,375	+				-0.1
11,375	+				-0.3
11,375	+				+0.2
11,375	+				+1.7
11,375	+				-0.7
11,375	+				-0.2
11,375	+				+0.5
11,375	+				-0.5
11,375	+				-0.6
11,375	+				-0.3
11,375	+				+1.3
11,375	+				-0.0
11,375	+				+0.6
11,375	+				-1.3
11,375	+				-1.4
11,375	+				-0.5
11,375	+				+0.8
11,375	+				-1.1
11,375	+				-2.1
11,375	+				-2.0
11,375	+				-1.0
11,375	+				-0.4
11,375	+				-0.9
11,375	+				+0.4
11,375	+				-0.3
11,375	+				-2.1
11,375	+				-1.8
11,375	+				-1.4
11,375	+				+1.1
11,375	+				-1.0
11,380	+				-0.5
11,380	+				-0.8
11,382	-				-0.1
11,383	-				-0.8
11,383	-				+0.7
11,383	-				-0.0
11,383	-				+1.3
11,383	-				-0.7
11,383	-				+0.5
11,383	-				+0.0
11,383	-				-0.5
11,383	-				-1.0
11,383	-				-0.5
11,383	-				+0.1
11,383	-				+0.1
11,383	-				+1.2
11,383	-				+0.5
11,383	-				-1.2
11,383	-				-2.3
11,383	-				+0.5
11,383	-				-1.8
11,383	-				-0.1
11,383	-				-0.3
11,383	-				+0.1
11,383	-				-0.4
11,383	-				-1.7
11,383	-				-1.1
11,383	-				-2.1
11,383	-				+0.2
11,383	-				-0.2
11,383	-				-3.2
11,383	-				-1.1
11,383	-				-0.2
11,383	-				-0.3
11,383	-				-0.2
11,383	-				+2.4
11,383	-				+0.8
11,383	-				-0.4
11,383	-				-0.8
11,383	-				+1.9
11,383	-				-2.0
11,383	-				-0.3
11,383	-				+0.4
11,383	-				-0.5
11,383	-				+0.2
11,383	-				+0.1
11,383	-				-0.1
11,383	-				-0.0
11,383	-				-2.1
11,383	-				+0.0
11,383	-				-0.2
11,383	-				+0.5
11,385	+				-0.0
11,388	+				-0.5
11,388	-				-0.2
11,388	-				-0.5
11,388	-				-0.2
11,398	+				-1.0
11,398	+				-3.3
11,398	+				-0.3
11,398	+				+0.5
11,398	+				+0.5
11,398	+				-2.0
11,401	-				+0.1
11,403	+				+0.1
11,405	+				-0.4
11,405	+				+0.9
11,405	+				-0.5
11,405	+				+0.6
11,405	+				-0.1
11,406	-				-0.0
11,406	-				-0.4
11,408	+				+0.2
11,408	+				+0.1
11,413	-				-0.1
11,415	+				+0.1
11,416	-				+0.4
11,421	-				-0.4
11,421	-				-0.5
11,421	-				-0.7
11,423	-				+0.3
11,423	-				-0.2
11,423	-				-0.1
11,428	+				-0.3
11,428	+				-3.7
11,430	+				+0.6
11,436	-				-0.2
11,436	-				+0.1
11,436	-				-0.4
11,436	-				-0.4
11,446	+				+0.7
11,461	-				+0.4
11,479	+				-0.9
11,489	-				+0.2
11,511	+				+0.2
11,511	+				-0.5
11,524	+				-0.5
11,531	+				-2.5
11,531	+				-1.1
11,531	+				-1.4
11,531	+				+0.2
11,539	-				+0.0
11,548	+				+0.2
11,548	+				-1.2
11,552	+				-0.9
11,592	-				+1.2
11,602	-				+1.3
11,606	-				-0.8
11,611	+				+0.2
11,616	+				+0.3
11,616	+				-0.4
11,625	-				-0.1
11,633	+				+0.3
11,633	+				+1.7
11,633	+				-1.9
11,641	-				+1.1
11,641	-				-0.1
11,641	-				+0.7
11,641	-				-0.4
11,641	-				+0.0
11,643	-				-1.0
11,661	+				+0.9
11,737	-				-0.2
11,738	+				-3.3
11,744	+				+0.4
11,745	+				+1.3
11,745	+				+0.2
11,745	+				-0.5
11,752	-				-1.0
11,753	-				+0.4
11,814	-		Dshi_0009	0.32	+0.3
11,820	-		Dshi_0009	0.35	+0.1
11,820	-		Dshi_0009	0.35	-2.5
11,824	+		Dshi_0009	0.37	+0.3
11,832	-		Dshi_0009	0.41	+1.2
11,832	-		Dshi_0009	0.41	-0.4
11,834	+		Dshi_0009	0.42	+0.0
11,842	-		Dshi_0009	0.46	-0.0
11,842	-		Dshi_0009	0.46	-0.2
11,842	-		Dshi_0009	0.46	+0.4
11,932	+		Dshi_0009	0.89	+0.6
11,942	+				-1.0
11,961	-				-1.7
11,989	-				+0.1
12,007	+				-0.4
12,008	-				-0.3
12,026	-				+0.3
12,033	-				+2.6
12,033	-				+0.3
12,059	-				-1.4
12,070	+				+0.9
12,076	+				-0.1
12,078	-				+0.6
12,078	-				-0.4
12,078	-				-1.1
12,078	-				+1.2
12,078	-				+0.2
12,106	-				-2.4
12,152	+				-0.7
12,201	+		Dshi_0010	0.15	-1.1
12,209	-		Dshi_0010	0.17	-0.8
12,234	+		Dshi_0010	0.22	-1.1