Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_960

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
1,130,031	-				-3.2
1,130,031	-				+0.3
1,130,137	-		Pf6N2E2_959	0.15	-1.9
1,130,337	+		Pf6N2E2_959	0.42	+0.3
1,130,530	-		Pf6N2E2_959	0.68	-1.3
1,130,582	-		Pf6N2E2_959	0.76	-1.3
1,130,582	-		Pf6N2E2_959	0.76	-0.5
1,130,615	+		Pf6N2E2_959	0.80	-2.8
1,130,615	+		Pf6N2E2_959	0.80	+1.1
1,130,811	+				+0.2
1,130,873	+				+2.5
1,130,873	+				+2.2
1,131,275	+		Pf6N2E2_960	0.20	+2.5
1,131,309	+		Pf6N2E2_960	0.22	+1.4
1,131,309	+		Pf6N2E2_960	0.22	+2.0
1,131,343	+		Pf6N2E2_960	0.24	+0.3
1,131,344	-		Pf6N2E2_960	0.24	+1.5
1,131,503	-		Pf6N2E2_960	0.31	-1.5
1,131,503	-		Pf6N2E2_960	0.31	+1.5
1,131,596	-		Pf6N2E2_960	0.35	-0.9
1,131,665	-		Pf6N2E2_960	0.39	-0.5
1,131,678	+		Pf6N2E2_960	0.39	+0.5
1,131,679	-		Pf6N2E2_960	0.39	-2.5
1,131,748	+		Pf6N2E2_960	0.43	-1.3
1,131,748	+		Pf6N2E2_960	0.43	+0.3
1,131,748	+		Pf6N2E2_960	0.43	+0.5
1,131,752	+		Pf6N2E2_960	0.43	-0.3
1,131,752	+		Pf6N2E2_960	0.43	-3.0
1,131,802	-		Pf6N2E2_960	0.45	-0.5
1,131,860	+		Pf6N2E2_960	0.48	-0.7
1,131,956	-		Pf6N2E2_960	0.52	+1.5
1,132,049	+		Pf6N2E2_960	0.57	+2.1
1,132,050	-		Pf6N2E2_960	0.57	-0.5
1,132,118	+		Pf6N2E2_960	0.60	+1.7
1,132,118	+		Pf6N2E2_960	0.60	+0.8
1,132,118	+		Pf6N2E2_960	0.60	-2.3
1,132,118	+		Pf6N2E2_960	0.60	-1.3
1,132,119	-		Pf6N2E2_960	0.60	-0.2
1,132,165	+		Pf6N2E2_960	0.62	-1.7
1,132,165	+		Pf6N2E2_960	0.62	-1.5
1,132,191	+		Pf6N2E2_960	0.64	+1.2
1,132,192	-		Pf6N2E2_960	0.64	+2.1
1,132,204	+		Pf6N2E2_960	0.64	+1.4
1,132,243	+		Pf6N2E2_960	0.66	+1.3
1,132,243	+		Pf6N2E2_960	0.66	+1.5
1,132,243	+		Pf6N2E2_960	0.66	+1.1
1,132,244	-		Pf6N2E2_960	0.66	-0.1
1,132,244	-		Pf6N2E2_960	0.66	-0.9
1,132,330	+		Pf6N2E2_960	0.70	+2.2
1,132,330	+		Pf6N2E2_960	0.70	-0.0
1,132,412	+		Pf6N2E2_960	0.74	-0.4
1,132,412	+		Pf6N2E2_960	0.74	+0.5
1,132,413	-		Pf6N2E2_960	0.74	+0.5
1,132,461	+		Pf6N2E2_960	0.76	-0.4
1,132,577	+		Pf6N2E2_960	0.82	+1.3
1,132,577	+		Pf6N2E2_960	0.82	+0.7
1,132,578	-		Pf6N2E2_960	0.82	-1.4
1,132,579	+		Pf6N2E2_960	0.82	+0.4
1,132,579	+		Pf6N2E2_960	0.82	+1.8
1,132,579	+		Pf6N2E2_960	0.82	+2.0
1,132,579	+		Pf6N2E2_960	0.82	-0.7
1,132,579	+		Pf6N2E2_960	0.82	+0.9
1,132,579	+		Pf6N2E2_960	0.82	-1.6
1,132,600	+		Pf6N2E2_960	0.83	-0.7
1,132,601	-		Pf6N2E2_960	0.83	-2.5
1,132,804	+				+0.1
1,132,862	-				+2.2
1,132,862	-				-3.2
1,132,897	-				+1.8
1,132,903	+				-1.5
1,132,903	+				-0.6
1,132,903	+				+1.0
1,132,903	+				-0.5
1,132,904	-				+2.9
1,133,189	+		Pf6N2E2_961	0.44	-0.4
1,133,207	+		Pf6N2E2_961	0.48	+0.5
1,133,345	+		Pf6N2E2_961	0.74	+1.7
1,133,458	+				-3.4
1,133,459	-				-2.8
1,133,465	+				+0.1
1,133,812	+		Pf6N2E2_962	0.66	-1.6
1,133,812	+		Pf6N2E2_962	0.66	-1.3
1,133,932	+		Pf6N2E2_962	0.89	+1.0