Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_874

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
1,023,656	+		Pf6N2E2_873	0.46	-1.9
1,023,656	+		Pf6N2E2_873	0.46	-0.7
1,023,657	-		Pf6N2E2_873	0.46	+1.3
1,023,657	-		Pf6N2E2_873	0.46	+0.5
1,023,657	-		Pf6N2E2_873	0.46	+0.6
1,023,657	-		Pf6N2E2_873	0.46	-0.4
1,023,835	+		Pf6N2E2_873	0.60	-0.7
1,023,835	+		Pf6N2E2_873	0.60	+2.3
1,023,969	+		Pf6N2E2_873	0.70	-1.0
1,023,970	-		Pf6N2E2_873	0.70	+0.6
1,023,973	+		Pf6N2E2_873	0.71	+1.0
1,023,973	+		Pf6N2E2_873	0.71	-2.1
1,023,974	-		Pf6N2E2_873	0.71	+1.2
1,023,974	-		Pf6N2E2_873	0.71	+0.6
1,023,974	-		Pf6N2E2_873	0.71	-1.9
1,023,974	-		Pf6N2E2_873	0.71	+0.7
1,023,974	-		Pf6N2E2_873	0.71	-1.7
1,023,974	-		Pf6N2E2_873	0.71	-0.0
1,023,974	-				+0.6
1,024,020	+		Pf6N2E2_873	0.74	-1.2
1,024,021	-		Pf6N2E2_873	0.74	+1.7
1,024,021	-		Pf6N2E2_873	0.74	-0.3
1,024,275	+				+0.7
1,024,275	+				+1.4
1,024,276	-				+3.2
1,024,276	-				-1.3
1,024,337	+				-2.3
1,024,338	-				-2.3
1,024,357	+				-0.3
1,024,357	+				+2.1
1,024,357	+				+0.1
1,024,357	+				+1.0
1,024,482	-				+0.8
1,024,586	+		Pf6N2E2_874	0.17	+0.3
1,024,586	+		Pf6N2E2_874	0.17	-1.4
1,024,587	-		Pf6N2E2_874	0.18	+1.2
1,024,587	-		Pf6N2E2_874	0.18	-0.2
1,024,587	-		Pf6N2E2_874	0.18	+1.3
1,024,587	-		Pf6N2E2_874	0.18	-0.3
1,024,587	-		Pf6N2E2_874	0.18	+0.2
1,024,643	+		Pf6N2E2_874	0.26	-2.2
1,024,644	-		Pf6N2E2_874	0.26	-1.9
1,024,713	+		Pf6N2E2_874	0.36	-0.3
1,024,714	-		Pf6N2E2_874	0.36	-1.3
1,024,714	-		Pf6N2E2_874	0.36	-0.3
1,024,715	+		Pf6N2E2_874	0.36	+1.3
1,024,715	+		Pf6N2E2_874	0.36	-0.4
1,024,715	+		Pf6N2E2_874	0.36	+0.6
1,024,716	-		Pf6N2E2_874	0.37	+0.6
1,024,716	-		Pf6N2E2_874	0.37	-0.1
1,024,716	-		Pf6N2E2_874	0.37	+0.4
1,024,730	+		Pf6N2E2_874	0.39	-3.4
1,024,730	+		Pf6N2E2_874	0.39	-0.7
1,024,730	+		Pf6N2E2_874	0.39	+0.6
1,024,730	+		Pf6N2E2_874	0.39	+1.7
1,024,730	+		Pf6N2E2_874	0.39	+1.2
1,024,730	+		Pf6N2E2_874	0.39	-0.2
1,024,731	-		Pf6N2E2_874	0.39	-0.0
1,024,731	-		Pf6N2E2_874	0.39	+1.0
1,024,814	+		Pf6N2E2_874	0.51	+0.5
1,024,815	-		Pf6N2E2_874	0.51	+0.5
1,024,963	+		Pf6N2E2_874	0.73	+0.5
1,024,984	+		Pf6N2E2_874	0.76	-0.1
1,024,984	+		Pf6N2E2_874	0.76	-1.1
1,024,985	-		Pf6N2E2_874	0.76	-1.2
1,024,985	-		Pf6N2E2_874	0.76	+1.5
1,025,069	+		Pf6N2E2_874	0.89	-2.0
1,025,096	+				+1.3
1,025,096	+				-0.2
1,025,096	+				+1.6
1,025,096	+				-1.8
1,025,096	+				+0.2
1,025,096	+				+0.6
1,025,097	-				+0.9
1,025,097	-				+0.8
1,025,130	+				-1.6
1,025,322	+		Pf6N2E2_875	0.26	-0.7
1,025,330	+		Pf6N2E2_875	0.28	+1.6
1,025,330	+		Pf6N2E2_875	0.28	-0.8
1,025,331	-		Pf6N2E2_875	0.28	+1.8
1,025,331	-		Pf6N2E2_875	0.28	-1.4
1,025,331	-		Pf6N2E2_875	0.28	+1.9
1,025,331	-		Pf6N2E2_875	0.28	+1.9
1,025,365	-		Pf6N2E2_875	0.36	+2.2
1,025,365	-		Pf6N2E2_875	0.36	-0.0
1,025,432	+		Pf6N2E2_875	0.51	-0.1
1,025,432	+		Pf6N2E2_875	0.51	+0.8
1,025,432	+		Pf6N2E2_875	0.51	+0.2
1,025,432	+		Pf6N2E2_875	0.51	+1.5
1,025,432	+		Pf6N2E2_875	0.51	-1.2
1,025,433	-		Pf6N2E2_875	0.51	-1.0
1,025,433	-		Pf6N2E2_875	0.51	-1.2
1,025,433	-		Pf6N2E2_875	0.51	+0.6
1,025,433	-		Pf6N2E2_875	0.51	-0.7
1,025,433	-		Pf6N2E2_875	0.51	-0.2
1,025,433	-		Pf6N2E2_875	0.51	-1.3
1,025,433	-		Pf6N2E2_875	0.51	+1.4
1,025,433	-		Pf6N2E2_875	0.51	+1.7
1,025,491	+		Pf6N2E2_875	0.65	+1.9
1,025,492	-		Pf6N2E2_875	0.65	+1.2
1,025,621	+				+1.1
1,025,622	-				-2.0
1,025,622	-				+1.3
1,025,622	-				-0.8
1,025,622	-				-0.7
1,025,647	-				-1.2
1,025,660	-				-1.3
1,025,660	-				+0.1
1,025,660	-				-1.1
1,025,670	+				-1.7
1,025,670	+				-1.0
1,025,737	+		Pf6N2E2_876	0.14	+0.5
1,025,761	-		Pf6N2E2_876	0.18	+0.3
1,025,976	+		Pf6N2E2_876	0.51	-1.9
1,026,092	-		Pf6N2E2_876	0.69	+0.2
1,026,095	-		Pf6N2E2_876	0.69	-0.2
1,026,095	-		Pf6N2E2_876	0.69	+1.2
1,026,109	+		Pf6N2E2_876	0.71	+0.3
1,026,110	-		Pf6N2E2_876	0.71	-2.1
1,026,110	-		Pf6N2E2_876	0.71	-0.7
1,026,110	-		Pf6N2E2_876	0.71	+0.6