Experiment: Hydroxylamine 0.5 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_802 and Pf6N2E2_803 are separated by 386 nucleotides Pf6N2E2_803 and Pf6N2E2_804 are separated by 99 nucleotides Pf6N2E2_804 and Pf6N2E2_805 are separated by 12 nucleotides
Pf6N2E2_802 - Threonine dehydratase biosynthetic (EC 4.3.1.19), at 933,262 to 934,269
_802
Pf6N2E2_803 - hypothetical protein, at 934,656 to 934,937
_803
Pf6N2E2_804 - Fructokinase (EC 2.7.1.4), at 935,037 to 935,975
_804
Pf6N2E2_805 - Xylulose kinase (EC 2.7.1.17) (from data) , at 935,988 to 937,475
_805
Position (kb)
935
936 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 934.086 kb on + strand, within Pf6N2E2_802 at 934.087 kb on - strand, within Pf6N2E2_802 at 934.087 kb on - strand, within Pf6N2E2_802 at 934.087 kb on - strand, within Pf6N2E2_802 at 934.090 kb on + strand, within Pf6N2E2_802 at 934.090 kb on + strand, within Pf6N2E2_802 at 934.090 kb on + strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.153 kb on + strand, within Pf6N2E2_802 at 934.153 kb on + strand, within Pf6N2E2_802 at 934.153 kb on + strand, within Pf6N2E2_802 at 934.154 kb on - strand, within Pf6N2E2_802 at 934.154 kb on - strand, within Pf6N2E2_802 at 934.282 kb on + strand at 934.283 kb on - strand at 934.333 kb on - strand at 934.335 kb on + strand at 934.342 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.348 kb on - strand at 934.393 kb on + strand at 934.440 kb on + strand at 934.440 kb on + strand at 934.440 kb on + strand at 934.542 kb on + strand at 934.572 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.625 kb on - strand at 934.625 kb on - strand at 934.625 kb on - strand at 934.625 kb on - strand at 934.663 kb on + strand at 934.663 kb on + strand at 934.955 kb on + strand at 934.955 kb on + strand at 934.956 kb on - strand at 935.056 kb on + strand at 935.214 kb on - strand, within Pf6N2E2_804 at 935.383 kb on + strand, within Pf6N2E2_804 at 935.428 kb on + strand, within Pf6N2E2_804 at 935.428 kb on + strand, within Pf6N2E2_804 at 935.428 kb on + strand, within Pf6N2E2_804 at 935.428 kb on + strand, within Pf6N2E2_804 at 935.428 kb on + strand, within Pf6N2E2_804 at 935.428 kb on + strand, within Pf6N2E2_804 at 935.429 kb on - strand, within Pf6N2E2_804 at 935.429 kb on - strand, within Pf6N2E2_804 at 935.625 kb on + strand, within Pf6N2E2_804 at 935.677 kb on + strand, within Pf6N2E2_804 at 935.678 kb on - strand, within Pf6N2E2_804 at 935.800 kb on + strand, within Pf6N2E2_804 at 935.800 kb on + strand, within Pf6N2E2_804 at 935.801 kb on - strand, within Pf6N2E2_804 at 935.896 kb on + strand at 935.896 kb on + strand at 935.896 kb on + strand at 935.897 kb on - strand at 935.897 kb on - strand at 935.971 kb on + strand at 935.971 kb on + strand at 935.971 kb on + strand at 935.971 kb on + strand at 935.971 kb on + strand at 935.972 kb on - strand at 935.972 kb on - strand at 935.972 kb on - strand at 935.972 kb on - strand at 935.975 kb on + strand at 935.976 kb on - strand at 935.976 kb on - strand at 935.976 kb on - strand at 935.976 kb on - strand at 935.976 kb on - strand at 935.976 kb on - strand at 936.022 kb on + strand at 936.022 kb on + strand at 936.022 kb on + strand at 936.022 kb on + strand at 936.022 kb on + strand at 936.022 kb on + strand at 936.023 kb on - strand at 936.023 kb on - strand at 936.023 kb on - strand at 936.023 kb on - strand at 936.023 kb on - strand at 936.081 kb on + strand at 936.082 kb on - strand at 936.313 kb on + strand, within Pf6N2E2_805 at 936.646 kb on + strand, within Pf6N2E2_805 at 936.647 kb on - strand, within Pf6N2E2_805 at 936.647 kb on - strand, within Pf6N2E2_805 at 936.652 kb on + strand, within Pf6N2E2_805 at 936.652 kb on + strand, within Pf6N2E2_805 at 936.876 kb on + strand, within Pf6N2E2_805 at 936.876 kb on + strand, within Pf6N2E2_805 at 936.876 kb on + strand, within Pf6N2E2_805 at 936.906 kb on + strand, within Pf6N2E2_805 at 936.906 kb on + strand, within Pf6N2E2_805 at 936.906 kb on + strand, within Pf6N2E2_805 at 936.906 kb on + strand, within Pf6N2E2_805 at 936.907 kb on - strand, within Pf6N2E2_805 at 936.907 kb on - strand, within Pf6N2E2_805 at 936.907 kb on - strand, within Pf6N2E2_805 at 936.907 kb on - strand, within Pf6N2E2_805 at 936.970 kb on + strand, within Pf6N2E2_805 at 936.970 kb on + strand, within Pf6N2E2_805 at 936.970 kb on + strand, within Pf6N2E2_805 at 936.970 kb on + strand, within Pf6N2E2_805 at 936.970 kb on + strand, within Pf6N2E2_805 at 936.970 kb on + strand, within Pf6N2E2_805 at 936.971 kb on - strand, within Pf6N2E2_805
Per-strain Table
Position Strand Gene LocusTag Fraction Hydroxylamine 0.5 M remove 934,086 + Pf6N2E2_802 0.82 +0.6 934,087 - Pf6N2E2_802 0.82 +1.1 934,087 - Pf6N2E2_802 0.82 +1.0 934,087 - Pf6N2E2_802 0.82 +0.4 934,090 + Pf6N2E2_802 0.82 +0.4 934,090 + Pf6N2E2_802 0.82 -1.0 934,090 + Pf6N2E2_802 0.82 +0.8 934,091 - Pf6N2E2_802 0.82 +0.6 934,091 - Pf6N2E2_802 0.82 +0.6 934,091 - Pf6N2E2_802 0.82 +1.6 934,091 - Pf6N2E2_802 0.82 +1.6 934,091 - Pf6N2E2_802 0.82 -2.4 934,153 + Pf6N2E2_802 0.88 -1.6 934,153 + Pf6N2E2_802 0.88 -0.6 934,153 + Pf6N2E2_802 0.88 +0.0 934,154 - Pf6N2E2_802 0.88 +2.7 934,154 - Pf6N2E2_802 0.88 +1.6 934,282 + +0.4 934,283 - -0.4 934,333 - -2.2 934,335 + -0.1 934,342 + +1.5 934,347 + -0.2 934,347 + +0.5 934,347 + -1.7 934,347 + -1.6 934,347 + +2.1 934,347 + -1.7 934,347 + -0.9 934,348 - +3.6 934,393 + -0.2 934,440 + +1.0 934,440 + -0.3 934,440 + +1.0 934,542 + -0.2 934,572 + +1.4 934,624 + +1.1 934,624 + +1.9 934,624 + -1.2 934,624 + +0.9 934,624 + +0.4 934,624 + -1.4 934,625 - -3.2 934,625 - +1.0 934,625 - -0.9 934,625 - -1.6 934,663 + -2.4 934,663 + -1.0 934,955 + +0.9 934,955 + -1.0 934,956 - -0.7 935,056 + -1.8 935,214 - Pf6N2E2_804 0.19 -0.4 935,383 + Pf6N2E2_804 0.37 +2.1 935,428 + Pf6N2E2_804 0.42 +0.6 935,428 + Pf6N2E2_804 0.42 +0.5 935,428 + Pf6N2E2_804 0.42 +1.8 935,428 + Pf6N2E2_804 0.42 -0.6 935,428 + Pf6N2E2_804 0.42 +2.9 935,428 + Pf6N2E2_804 0.42 -0.7 935,429 - Pf6N2E2_804 0.42 +2.9 935,429 - Pf6N2E2_804 0.42 -0.7 935,625 + Pf6N2E2_804 0.63 -0.9 935,677 + Pf6N2E2_804 0.68 +1.6 935,678 - Pf6N2E2_804 0.68 -1.2 935,800 + Pf6N2E2_804 0.81 -1.0 935,800 + Pf6N2E2_804 0.81 +0.0 935,801 - Pf6N2E2_804 0.81 -1.4 935,896 + -1.0 935,896 + +1.4 935,896 + -1.0 935,897 - +0.5 935,897 - +1.4 935,971 + +0.8 935,971 + +1.9 935,971 + -2.6 935,971 + +1.8 935,971 + -0.2 935,972 - -2.1 935,972 - +1.8 935,972 - -1.6 935,972 - +1.9 935,975 + -0.5 935,976 - +1.7 935,976 - +1.9 935,976 - +0.2 935,976 - -0.6 935,976 - -1.4 935,976 - +3.8 936,022 + +0.5 936,022 + +2.6 936,022 + -0.9 936,022 + -0.7 936,022 + -1.1 936,022 + +0.7 936,023 - +0.8 936,023 - +2.4 936,023 - +2.3 936,023 - +3.0 936,023 - +1.1 936,081 + +0.7 936,082 - -0.7 936,313 + Pf6N2E2_805 0.22 -0.1 936,646 + Pf6N2E2_805 0.44 -0.4 936,647 - Pf6N2E2_805 0.44 +0.7 936,647 - Pf6N2E2_805 0.44 +0.6 936,652 + Pf6N2E2_805 0.45 -2.8 936,652 + Pf6N2E2_805 0.45 +0.8 936,876 + Pf6N2E2_805 0.60 +0.7 936,876 + Pf6N2E2_805 0.60 +0.7 936,876 + Pf6N2E2_805 0.60 -0.6 936,906 + Pf6N2E2_805 0.62 -0.8 936,906 + Pf6N2E2_805 0.62 +2.1 936,906 + Pf6N2E2_805 0.62 -0.1 936,906 + Pf6N2E2_805 0.62 -1.6 936,907 - Pf6N2E2_805 0.62 -0.7 936,907 - Pf6N2E2_805 0.62 -2.1 936,907 - Pf6N2E2_805 0.62 -2.5 936,907 - Pf6N2E2_805 0.62 -2.8 936,970 + Pf6N2E2_805 0.66 -1.0 936,970 + Pf6N2E2_805 0.66 +0.4 936,970 + Pf6N2E2_805 0.66 -1.2 936,970 + Pf6N2E2_805 0.66 -3.7 936,970 + Pf6N2E2_805 0.66 -0.1 936,970 + Pf6N2E2_805 0.66 -0.5 936,971 - Pf6N2E2_805 0.66 +1.0
Or see this region's nucleotide sequence