Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5662

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
6,473,209	+		Pf6N2E2_5660	0.78	+0.7
6,473,209	+		Pf6N2E2_5660	0.78	+3.2
6,473,235	+		Pf6N2E2_5660	0.81	+1.6
6,473,235	+		Pf6N2E2_5660	0.81	+0.8
6,473,235	+		Pf6N2E2_5660	0.81	+1.4
6,473,236	-		Pf6N2E2_5660	0.81	-1.0
6,473,331	+				+3.0
6,473,331	+				+1.0
6,473,331	+				+1.4
6,473,332	-				+1.8
6,473,352	+				+1.0
6,473,352	+				+0.4
6,473,352	+				+1.8
6,473,353	-				+3.2
6,473,353	-				+3.1
6,473,353	-				+1.4
6,473,370	+				+2.1
6,473,370	+				+1.5
6,473,370	+				+2.7
6,473,371	-				+2.9
6,473,371	-				+3.2
6,473,371	-				+2.4
6,473,371	-				+3.2
6,473,371	-				+2.5
6,473,371	-				+1.7
6,473,379	+				-0.9
6,473,380	-				+1.7
6,473,625	+		Pf6N2E2_5661	0.22	+2.3
6,473,626	-		Pf6N2E2_5661	0.22	+1.9
6,473,646	-		Pf6N2E2_5661	0.25	+2.0
6,473,680	-		Pf6N2E2_5661	0.30	+2.1
6,473,733	+		Pf6N2E2_5661	0.38	+2.5
6,473,733	+		Pf6N2E2_5661	0.38	+2.1
6,473,733	+		Pf6N2E2_5661	0.38	+1.2
6,473,734	-		Pf6N2E2_5661	0.38	-1.0
6,473,734	-		Pf6N2E2_5661	0.38	+1.8
6,473,793	+		Pf6N2E2_5661	0.47	+1.9
6,473,794	-		Pf6N2E2_5661	0.47	+1.4
6,474,075	+		Pf6N2E2_5661	0.87	+2.8
6,474,075	+		Pf6N2E2_5661	0.87	+2.4
6,474,076	-		Pf6N2E2_5661	0.88	+2.4
6,474,136	+				+2.6
6,474,157	+				+2.1
6,474,157	+				+1.3
6,474,157	+				+2.4
6,474,157	+				+0.8
6,474,158	-				+1.5
6,474,158	-				-1.4
6,474,170	+				+3.1
6,474,182	+				-0.1
6,474,182	+				+1.8
6,474,182	+				+1.4
6,474,182	+				+0.5
6,474,182	+				+3.2
6,474,183	-				+1.1
6,474,183	-				+1.5
6,474,183	-				+1.9
6,474,183	-				+2.6
6,474,183	-				+2.2
6,474,200	+				+0.2
6,474,201	-				+0.7
6,474,329	+		Pf6N2E2_5662	0.24	+1.6
6,474,335	+		Pf6N2E2_5662	0.25	+2.0
6,474,335	+		Pf6N2E2_5662	0.25	+2.1
6,474,335	+		Pf6N2E2_5662	0.25	-2.3
6,474,335	+		Pf6N2E2_5662	0.25	+1.0
6,474,335	+		Pf6N2E2_5662	0.25	+2.2
6,474,335	+		Pf6N2E2_5662	0.25	+3.3
6,474,335	+		Pf6N2E2_5662	0.25	+3.3
6,474,335	+		Pf6N2E2_5662	0.25	+1.7
6,474,335	+		Pf6N2E2_5662	0.25	+2.7
6,474,336	-		Pf6N2E2_5662	0.25	+2.0
6,474,336	-		Pf6N2E2_5662	0.25	+0.5
6,474,336	-		Pf6N2E2_5662	0.25	+0.7
6,474,336	-		Pf6N2E2_5662	0.25	+2.2
6,474,380	+		Pf6N2E2_5662	0.32	+2.8
6,474,381	-		Pf6N2E2_5662	0.32	+2.5
6,474,383	+		Pf6N2E2_5662	0.32	+1.7
6,474,383	+		Pf6N2E2_5662	0.32	+2.9
6,474,488	+		Pf6N2E2_5662	0.47	+0.4
6,474,489	-		Pf6N2E2_5662	0.47	-0.4
6,474,489	-		Pf6N2E2_5662	0.47	+2.5
6,474,629	+		Pf6N2E2_5662	0.67	+2.4
6,474,629	+		Pf6N2E2_5662	0.67	+4.4
6,474,630	-		Pf6N2E2_5662	0.68	+2.4
6,474,630	-		Pf6N2E2_5662	0.68	+2.7
6,474,635	-		Pf6N2E2_5662	0.68	+1.9
6,474,728	+		Pf6N2E2_5662	0.82	+0.3
6,474,729	-		Pf6N2E2_5662	0.82	+2.4
6,474,731	+		Pf6N2E2_5662	0.82	+2.4
6,474,731	+		Pf6N2E2_5662	0.82	+2.0
6,474,732	-		Pf6N2E2_5662	0.82	+1.0
6,474,732	-		Pf6N2E2_5662	0.82	+3.3
6,474,732	-		Pf6N2E2_5662	0.82	+1.2
6,474,732	-		Pf6N2E2_5662	0.82	+1.5
6,474,732	-		Pf6N2E2_5662	0.82	+0.6
6,474,749	+		Pf6N2E2_5662	0.85	+2.6
6,474,749	+		Pf6N2E2_5662	0.85	+3.0
6,474,750	-		Pf6N2E2_5662	0.85	+1.1
6,474,770	+		Pf6N2E2_5662	0.88	+2.7
6,474,771	-		Pf6N2E2_5662	0.88	-0.4
6,474,787	+				+1.4
6,474,834	-				+1.0
6,474,916	+				+3.3
6,474,916	+				+4.4
6,474,916	+				+1.3
6,474,916	+				-2.1
6,474,916	+				+3.0
6,474,916	+				+2.8
6,474,917	-				+0.6
6,474,917	-				+1.5
6,474,943	-				+1.8
6,474,943	-				+2.7
6,474,949	+				+1.2
6,475,041	+		Pf6N2E2_5663	0.17	+1.8
6,475,042	-		Pf6N2E2_5663	0.17	+1.7
6,475,042	-		Pf6N2E2_5663	0.17	+2.0
6,475,309	+		Pf6N2E2_5663	0.52	+1.1
6,475,309	+		Pf6N2E2_5663	0.52	-0.6
6,475,310	-		Pf6N2E2_5663	0.52	+1.9
6,475,467	-		Pf6N2E2_5663	0.72	+0.8
6,475,467	-		Pf6N2E2_5663	0.72	+0.1
6,475,587	+		Pf6N2E2_5663	0.88	+2.0
6,475,676	-				+3.2
6,475,676	-				+1.2
6,475,734	+				+0.2
6,475,735	-				+2.6
6,475,735	-				+1.0
6,475,762	-				+2.8
6,475,762	-				+0.1
6,475,808	-				+3.5
6,475,833	-				+1.3