Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5167

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
5,954,460	+		Pf6N2E2_5165	0.88	-2.2
5,954,460	+		Pf6N2E2_5165	0.88	+0.5
5,954,461	-		Pf6N2E2_5165	0.88	+2.1
5,954,461	-		Pf6N2E2_5165	0.88	+0.0
5,954,555	+				+1.3
5,954,555	+				-0.2
5,954,555	+				-2.4
5,954,555	+				+1.2
5,954,555	+				+1.5
5,954,555	+				+1.4
5,954,556	-				+0.4
5,954,556	-				+0.5
5,954,556	-				-2.3
5,954,556	-				-1.1
5,954,559	+				+0.2
5,954,559	+				+0.9
5,954,559	+				-1.6
5,954,559	+				-1.2
5,954,559	+				+0.2
5,954,560	-				-0.6
5,954,560	-				-0.7
5,954,560	-				-2.4
5,954,666	+		Pf6N2E2_5166	0.11	-0.6
5,954,666	+		Pf6N2E2_5166	0.11	+0.5
5,954,667	-		Pf6N2E2_5166	0.11	-0.1
5,954,697	+		Pf6N2E2_5166	0.15	-0.9
5,954,697	+		Pf6N2E2_5166	0.15	-1.5
5,954,698	-		Pf6N2E2_5166	0.15	-1.4
5,954,703	+		Pf6N2E2_5166	0.16	+0.4
5,954,971	+		Pf6N2E2_5166	0.51	-0.5
5,954,971	+		Pf6N2E2_5166	0.51	+2.3
5,954,972	-		Pf6N2E2_5166	0.51	-2.5
5,955,402	+				+0.3
5,955,402	+				+0.6
5,955,402	+				-0.2
5,955,402	+				-1.2
5,955,402	+				+0.7
5,955,403	-				+0.2
5,955,403	-				-2.9
5,955,672	+		Pf6N2E2_5167	0.36	-0.3
5,955,737	+		Pf6N2E2_5167	0.44	-0.7
5,955,737	+		Pf6N2E2_5167	0.44	-2.2
5,955,737	+		Pf6N2E2_5167	0.44	-1.2
5,955,737	+		Pf6N2E2_5167	0.44	-2.8
5,955,737	+		Pf6N2E2_5167	0.44	-1.7
5,955,737	+		Pf6N2E2_5167	0.44	-2.5
5,955,737	+		Pf6N2E2_5167	0.44	+1.1
5,955,737	+		Pf6N2E2_5167	0.44	-1.5
5,955,738	-		Pf6N2E2_5167	0.44	-0.3
5,955,738	-		Pf6N2E2_5167	0.44	-1.8
5,955,738	-		Pf6N2E2_5167	0.44	-0.7
5,955,738	-		Pf6N2E2_5167	0.44	+0.2
5,955,738	-		Pf6N2E2_5167	0.44	-1.0
5,955,738	-		Pf6N2E2_5167	0.44	-1.9
5,955,738	-		Pf6N2E2_5167	0.44	-0.2
5,955,821	+		Pf6N2E2_5167	0.53	+0.7
5,955,822	-		Pf6N2E2_5167	0.53	-1.2
5,955,835	+		Pf6N2E2_5167	0.55	+0.1
5,955,835	+		Pf6N2E2_5167	0.55	-2.4
5,955,836	-		Pf6N2E2_5167	0.55	-0.4
5,956,149	-				+0.3
5,956,149	-				-3.7
5,956,149	-				+0.8
5,956,158	-				+0.2
5,956,184	+				-1.9
5,956,185	-				-2.2
5,956,225	+				+0.4
5,956,225	+				-1.5
5,956,226	-				-1.8
5,956,272	+				-0.1
5,956,288	+				-2.0
5,956,288	+				-0.1
5,956,288	+				-1.5
5,956,289	-				+0.5
5,956,289	-				+1.2
5,956,387	+				-2.0
5,956,451	+				+0.7
5,956,452	-				+0.5
5,956,452	-				+1.0
5,956,452	-				+1.3
5,956,452	-				-1.1
5,956,452	-				-0.5
5,956,481	+		Pf6N2E2_5168	0.14	+0.2
5,956,482	-		Pf6N2E2_5168	0.14	+1.6
5,956,552	+		Pf6N2E2_5168	0.40	+0.9
5,956,552	+		Pf6N2E2_5168	0.40	+1.6
5,956,552	+		Pf6N2E2_5168	0.40	-0.6
5,956,553	-		Pf6N2E2_5168	0.40	-1.9
5,956,553	-		Pf6N2E2_5168	0.40	+1.3
5,956,627	-		Pf6N2E2_5168	0.67	-0.5
5,956,769	+				-0.6
5,956,770	-				-1.5
5,956,780	-				+1.6
5,956,780	-				-1.5
5,956,823	+				-1.4
5,956,823	+				-0.6
5,956,823	+				+1.2
5,956,823	+				-0.2
5,956,823	+				+0.2
5,956,824	-				-0.4
5,956,824	-				-2.1
5,956,824	-				-3.6
5,956,863	+				+0.9
5,956,863	+				+1.2
5,956,864	-				-1.1
5,956,864	-				-2.8
5,956,963	-				+0.2
5,957,028	+		Pf6N2E2_5169	0.23	+0.8
5,957,028	+		Pf6N2E2_5169	0.23	-0.6
5,957,029	-		Pf6N2E2_5169	0.23	-0.9
5,957,029	-		Pf6N2E2_5169	0.23	-0.3
5,957,029	-		Pf6N2E2_5169	0.23	+1.0
5,957,029	-		Pf6N2E2_5169	0.23	-2.4
5,957,029	-		Pf6N2E2_5169	0.23	+0.1
5,957,119	-		Pf6N2E2_5169	0.50	+1.1