Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5047

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
5,822,167	+		Pf6N2E2_5046	0.38	+1.6
5,822,167	+		Pf6N2E2_5046	0.38	+1.6
5,822,167	+		Pf6N2E2_5046	0.38	-0.2
5,822,168	-		Pf6N2E2_5046	0.38	+0.8
5,822,171	+		Pf6N2E2_5046	0.39	+0.1
5,822,171	+		Pf6N2E2_5046	0.39	+2.4
5,822,171	+		Pf6N2E2_5046	0.39	+0.5
5,822,172	-		Pf6N2E2_5046	0.39	+0.7
5,822,172	-		Pf6N2E2_5046	0.39	+0.6
5,822,172	-		Pf6N2E2_5046	0.39	-0.9
5,822,636	+		Pf6N2E2_5046	0.73	-0.3
5,822,636	+		Pf6N2E2_5046	0.73	+1.0
5,822,636	+		Pf6N2E2_5046	0.73	+0.2
5,822,636	+		Pf6N2E2_5046	0.73	+1.4
5,822,636	+		Pf6N2E2_5046	0.73	+0.8
5,822,637	-		Pf6N2E2_5046	0.73	+0.4
5,822,952	+				+2.4
5,822,953	-				+1.4
5,822,965	+				+0.8
5,822,983	+				-1.4
5,822,983	+				-0.6
5,822,983	+				-1.6
5,822,983	+				-0.4
5,822,983	+				+0.4
5,822,983	+				-0.3
5,822,983	+				+0.6
5,823,041	+				-1.7
5,823,041	+				+2.4
5,823,042	-				+0.1
5,823,060	+				-1.1
5,823,060	+				+1.4
5,823,060	+				-2.3
5,823,060	+				-1.5
5,823,061	-				-0.8
5,823,061	-				+2.0
5,823,061	-				-3.5
5,823,062	+				-0.2
5,823,062	+				-0.7
5,823,062	+				-1.8
5,823,063	-				+0.5
5,823,063	-				+0.4
5,823,063	-				-1.0
5,823,369	-		Pf6N2E2_5047	0.24	-0.2
5,823,369	-		Pf6N2E2_5047	0.24	+1.5
5,823,463	+		Pf6N2E2_5047	0.31	-1.2
5,823,552	+		Pf6N2E2_5047	0.38	-2.0
5,823,552	+		Pf6N2E2_5047	0.38	+1.4
5,823,553	-		Pf6N2E2_5047	0.38	-0.8
5,823,553	-		Pf6N2E2_5047	0.38	+1.6
5,823,609	-		Pf6N2E2_5047	0.43	+0.3
5,823,609	-		Pf6N2E2_5047	0.43	-2.3
5,823,609	-		Pf6N2E2_5047	0.43	-0.6
5,823,731	+		Pf6N2E2_5047	0.52	+1.3
5,823,731	+		Pf6N2E2_5047	0.52	+0.5
5,823,731	+		Pf6N2E2_5047	0.52	+1.5
5,824,175	+		Pf6N2E2_5047	0.86	-0.6
5,824,176	-		Pf6N2E2_5047	0.86	-0.8
5,824,330	-				+0.7
5,824,343	+				+0.4
5,824,343	+				-0.0
5,824,344	-				-1.2
5,824,344	-				+1.5
5,824,403	+				-2.4
5,824,403	+				+0.3
5,824,403	+				-2.7
5,824,403	+				+0.2
5,824,404	-				+2.0
5,824,405	+				+3.0
5,824,405	+				+1.0
5,824,414	+				+0.2
5,824,414	+				+0.6
5,824,415	-				-1.5
5,824,415	-				-0.4
5,824,415	-				+0.5
5,824,574	+				-0.9
5,824,719	-		Pf6N2E2_5048	0.25	-1.6
5,824,719	-		Pf6N2E2_5048	0.25	+1.2
5,824,719	-		Pf6N2E2_5048	0.25	+0.2
5,824,740	-		Pf6N2E2_5048	0.28	-2.0
5,824,754	+		Pf6N2E2_5048	0.29	+1.5
5,824,754	+		Pf6N2E2_5048	0.29	-3.0
5,824,873	+		Pf6N2E2_5048	0.42	-0.1
5,824,874	-		Pf6N2E2_5048	0.42	+1.6
5,824,947	+		Pf6N2E2_5048	0.50	-1.7
5,824,947	+		Pf6N2E2_5048	0.50	+0.7
5,824,947	+		Pf6N2E2_5048	0.50	-1.3
5,824,947	+		Pf6N2E2_5048	0.50	-0.8
5,824,947	+		Pf6N2E2_5048	0.50	-1.3
5,824,948	-		Pf6N2E2_5048	0.50	+0.7
5,824,982	+		Pf6N2E2_5048	0.54	-1.9
5,825,207	+		Pf6N2E2_5048	0.78	+1.7
5,825,208	-		Pf6N2E2_5048	0.78	-0.9
5,825,208	-		Pf6N2E2_5048	0.78	+2.0
5,825,208	-		Pf6N2E2_5048	0.78	-3.0
5,825,208	-		Pf6N2E2_5048	0.78	+2.3
5,825,208	-		Pf6N2E2_5048	0.78	+0.9
5,825,208	-		Pf6N2E2_5048	0.78	-0.5
5,825,217	+		Pf6N2E2_5048	0.79	-4.0
5,825,218	-		Pf6N2E2_5048	0.79	+0.5
5,825,218	-		Pf6N2E2_5048	0.79	-2.4
5,825,218	-		Pf6N2E2_5048	0.79	-0.1
5,825,219	+		Pf6N2E2_5048	0.80	+1.4
5,825,219	+		Pf6N2E2_5048	0.80	+2.5
5,825,220	-		Pf6N2E2_5048	0.80	+1.0
5,825,220	-		Pf6N2E2_5048	0.80	-2.0
5,825,220	-		Pf6N2E2_5048	0.80	-2.9
5,825,220	-		Pf6N2E2_5048	0.80	-0.3
5,825,220	-		Pf6N2E2_5048	0.80	-2.5
5,825,220	-		Pf6N2E2_5048	0.80	+1.1
5,825,220	-		Pf6N2E2_5048	0.80	+0.2
5,825,220	-		Pf6N2E2_5048	0.80	+0.2
5,825,220	-		Pf6N2E2_5048	0.80	-0.5
5,825,260	+		Pf6N2E2_5048	0.84	+0.1
5,825,261	-		Pf6N2E2_5048	0.84	+0.3