Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4981

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
5,746,384	+				+1.1
5,746,384	+				-2.0
5,746,384	+				-2.4
5,746,384	+				+0.2
5,746,384	+				-1.0
5,746,385	-				-0.3
5,746,385	-				-2.7
5,746,385	-				+0.9
5,746,385	-				+0.4
5,746,385	-				-0.1
5,746,385	-				-1.0
5,746,385	-				+0.9
5,746,385	-				+3.2
5,746,385	-				-0.5
5,746,385	-				+0.1
5,746,385	-				+1.0
5,746,395	+				+0.1
5,746,395	+				+1.2
5,746,395	+				+1.6
5,746,395	+				-1.4
5,746,395	+				-1.6
5,746,396	-				+0.8
5,746,396	-				-2.0
5,746,396	-				+3.0
5,746,396	-				-2.0
5,746,434	+				-0.3
5,746,434	+				+0.9
5,746,434	+				-1.4
5,746,434	+				-1.6
5,746,434	+				+1.5
5,746,435	-				+0.6
5,746,435	-				+0.6
5,746,435	-				-2.4
5,746,435	-				+1.2
5,746,435	-				+1.0
5,746,435	-				+1.2
5,746,438	+				-1.4
5,746,443	+				-1.9
5,746,443	+				+0.7
5,746,444	-				+3.1
5,746,444	-				-2.1
5,746,444	-				+0.3
5,746,444	-				-2.7
5,746,465	+				+0.8
5,746,525	+				+1.1
5,746,525	+				-0.9
5,746,525	+				-1.6
5,746,526	-				+0.8
5,746,526	-				-0.8
5,746,527	+				+0.8
5,746,527	+				-2.9
5,746,527	+				-0.7
5,746,528	-				+1.1
5,746,528	-				-2.0
5,746,528	-				+0.5
5,746,562	+				+0.1
5,746,562	+				+0.3
5,746,562	+				-0.6
5,746,563	-				-0.8
5,746,563	-				+2.4
5,746,563	-				+1.6
5,746,568	+				+1.4
5,746,784	+		Pf6N2E2_4980	0.41	-2.0
5,746,784	+		Pf6N2E2_4980	0.41	-1.3
5,746,784	+		Pf6N2E2_4980	0.41	+1.3
5,746,785	-		Pf6N2E2_4980	0.41	-0.1
5,746,786	+		Pf6N2E2_4980	0.41	+1.2
5,746,786	+		Pf6N2E2_4980	0.41	-1.7
5,746,786	+		Pf6N2E2_4980	0.41	-3.0
5,746,786	+		Pf6N2E2_4980	0.41	-0.3
5,746,786	+		Pf6N2E2_4980	0.41	-1.0
5,746,786	+		Pf6N2E2_4980	0.41	-0.3
5,746,787	-		Pf6N2E2_4980	0.42	-1.4
5,746,956	+		Pf6N2E2_4980	0.74	+1.2
5,746,957	-		Pf6N2E2_4980	0.74	-2.9
5,746,957	-		Pf6N2E2_4980	0.74	+0.7
5,746,957	-		Pf6N2E2_4980	0.74	+0.3
5,747,059	+				+0.1
5,747,059	+				-0.0
5,747,062	+				-2.0
5,747,062	+				-0.6
5,747,063	-				-3.2
5,747,063	-				+2.6
5,747,063	-				-0.4
5,747,699	-		Pf6N2E2_4981	0.33	-0.4
5,747,847	+		Pf6N2E2_4981	0.41	+1.9
5,747,847	+		Pf6N2E2_4981	0.41	-0.7
5,747,848	-		Pf6N2E2_4981	0.41	+1.2
5,747,848	-		Pf6N2E2_4981	0.41	-1.1
5,747,927	+		Pf6N2E2_4981	0.45	+1.7
5,747,927	+		Pf6N2E2_4981	0.45	+1.5
5,747,927	+		Pf6N2E2_4981	0.45	-1.3
5,747,927	+		Pf6N2E2_4981	0.45	-0.2
5,747,928	-		Pf6N2E2_4981	0.45	-0.1
5,747,928	-		Pf6N2E2_4981	0.45	-0.6
5,747,928	-		Pf6N2E2_4981	0.45	+1.7
5,747,928	-		Pf6N2E2_4981	0.45	+0.5
5,747,928	-		Pf6N2E2_4981	0.45	+0.2
5,748,231	+		Pf6N2E2_4981	0.61	-0.2
5,748,231	+		Pf6N2E2_4981	0.61	-0.9
5,748,231	+		Pf6N2E2_4981	0.61	+0.4
5,748,232	-		Pf6N2E2_4981	0.61	-0.5
5,748,232	-		Pf6N2E2_4981	0.61	-1.0
5,748,232	-		Pf6N2E2_4981	0.61	+0.6
5,748,538	+		Pf6N2E2_4981	0.77	-1.9
5,748,538	+		Pf6N2E2_4981	0.77	-1.6
5,748,538	+		Pf6N2E2_4981	0.77	-1.7
5,748,538	+		Pf6N2E2_4981	0.77	-1.1
5,748,538	+		Pf6N2E2_4981	0.77	+1.4
5,748,539	-		Pf6N2E2_4981	0.77	-0.0
5,748,539	-		Pf6N2E2_4981	0.77	-1.3
5,748,539	-		Pf6N2E2_4981	0.77	-0.2
5,748,539	-		Pf6N2E2_4981	0.77	-0.9
5,748,539	-		Pf6N2E2_4981	0.77	-0.4
5,748,717	+		Pf6N2E2_4981	0.86	+1.0
5,748,717	+		Pf6N2E2_4981	0.86	-0.9
5,748,717	+		Pf6N2E2_4981	0.86	-0.8
5,748,717	+		Pf6N2E2_4981	0.86	-0.3
5,748,718	-		Pf6N2E2_4981	0.86	-0.7
5,748,930	+				-2.2
5,748,978	+				-1.1
5,748,978	+				-2.4
5,748,978	+				+0.8
5,748,979	-				-1.3
5,748,979	-				+1.1
5,748,979	-				+0.3
5,749,147	+				+0.6
5,749,147	+				+0.1
5,749,147	+				+1.8
5,749,147	+				-1.4
5,749,147	+				+0.2
5,749,148	-				-0.1
5,749,148	-				-0.8
5,749,148	-				+0.9
5,749,148	-				+1.3
5,749,249	+				-0.3
5,749,249	+				-2.2
5,749,250	-				-2.6
5,749,250	-				+0.2
5,749,250	-				-0.2
5,749,250	-				-0.1
5,749,250	-				-0.4
5,749,250	-				-0.0
5,749,250	-				+0.6
5,749,250	-				+0.3
5,749,268	+				-0.1
5,749,268	+				-1.3
5,749,268	+				-0.7
5,749,268	+				-0.2
5,749,268	+				+1.1
5,749,269	-				+0.7
5,749,269	-				-0.0
5,749,269	-				+0.5
5,749,269	-				+0.0
5,749,269	-				+0.1
5,749,269	-				+1.3
5,749,269	-				+0.5
5,749,303	+				+0.3
5,749,325	+				+0.6
5,749,349	+				-2.3
5,749,349	+				-2.6
5,749,349	+				-1.1
5,749,575	+		Pf6N2E2_4982	0.18	+1.9
5,749,575	+		Pf6N2E2_4982	0.18	-1.7
5,749,575	+		Pf6N2E2_4982	0.18	+1.0
5,749,599	+		Pf6N2E2_4982	0.19	+0.6
5,749,599	+		Pf6N2E2_4982	0.19	-1.1