Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4667

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
5,396,761	+		Pf6N2E2_4666	0.60	+0.8
5,396,761	+		Pf6N2E2_4666	0.60	-1.1
5,396,761	+		Pf6N2E2_4666	0.60	-0.2
5,396,761	+		Pf6N2E2_4666	0.60	-0.2
5,396,762	-		Pf6N2E2_4666	0.60	+1.1
5,396,762	-		Pf6N2E2_4666	0.60	+1.0
5,396,762	-		Pf6N2E2_4666	0.60	-0.8
5,396,800	+		Pf6N2E2_4666	0.61	-1.3
5,396,800	+		Pf6N2E2_4666	0.61	-1.0
5,396,886	+		Pf6N2E2_4666	0.65	+1.3
5,396,887	-		Pf6N2E2_4666	0.66	+0.0
5,396,893	+		Pf6N2E2_4666	0.66	+2.5
5,396,893	+		Pf6N2E2_4666	0.66	-0.3
5,396,893	+		Pf6N2E2_4666	0.66	-2.7
5,396,894	-		Pf6N2E2_4666	0.66	+2.1
5,396,894	-		Pf6N2E2_4666	0.66	+0.7
5,396,906	+		Pf6N2E2_4666	0.66	+2.4
5,396,906	+		Pf6N2E2_4666	0.66	-2.4
5,396,906	+		Pf6N2E2_4666	0.66	-2.9
5,396,906	+		Pf6N2E2_4666	0.66	-1.1
5,396,907	-		Pf6N2E2_4666	0.66	+0.5
5,396,907	-		Pf6N2E2_4666	0.66	-0.6
5,396,907	-		Pf6N2E2_4666	0.66	+0.9
5,396,907	-		Pf6N2E2_4666	0.66	+1.6
5,397,046	+		Pf6N2E2_4666	0.73	-2.6
5,397,046	+		Pf6N2E2_4666	0.73	-3.1
5,397,047	-		Pf6N2E2_4666	0.73	-0.7
5,397,123	+		Pf6N2E2_4666	0.77	-0.8
5,397,123	+		Pf6N2E2_4666	0.77	+1.0
5,397,123	+		Pf6N2E2_4666	0.77	+0.7
5,397,124	-		Pf6N2E2_4666	0.77	+0.1
5,397,124	-		Pf6N2E2_4666	0.77	+0.1
5,397,124	-		Pf6N2E2_4666	0.77	-0.6
5,397,124	-		Pf6N2E2_4666	0.77	+0.2
5,397,124	-		Pf6N2E2_4666	0.77	-2.4
5,397,124	-		Pf6N2E2_4666	0.77	+0.4
5,397,124	-		Pf6N2E2_4666	0.77	-2.2
5,397,124	-		Pf6N2E2_4666	0.77	-1.1
5,397,127	-		Pf6N2E2_4666	0.77	+0.9
5,397,444	+				+1.4
5,397,444	+				+1.0
5,397,444	+				-0.0
5,397,496	+				-0.0
5,397,496	+				+0.8
5,397,496	+				-0.8
5,397,496	+				+1.1
5,397,496	+				-2.7
5,397,497	-				-2.1
5,397,497	-				+0.6
5,397,497	-				-1.2
5,397,497	-				-1.0
5,397,526	+				+2.0
5,397,526	+				-3.0
5,397,527	-				+1.7
5,397,527	-				-1.6
5,397,527	-				+0.1
5,397,527	-				+1.0
5,397,527	-				-2.8
5,397,527	-				-1.2
5,397,625	+				-0.3
5,397,676	+				+1.2
5,397,677	-				-0.2
5,397,677	-				+0.4
5,397,677	-				+1.6
5,397,749	-		Pf6N2E2_4667	0.17	-1.9
5,397,749	-		Pf6N2E2_4667	0.17	+0.5
5,397,802	+		Pf6N2E2_4667	0.28	-2.3
5,397,802	+		Pf6N2E2_4667	0.28	-0.7
5,397,802	+		Pf6N2E2_4667	0.28	-1.9
5,397,802	+		Pf6N2E2_4667	0.28	+1.4
5,397,802	+		Pf6N2E2_4667	0.28	+0.1
5,397,832	+		Pf6N2E2_4667	0.34	+0.1
5,397,832	+		Pf6N2E2_4667	0.34	+0.4
5,397,832	+		Pf6N2E2_4667	0.34	+0.8
5,397,832	+		Pf6N2E2_4667	0.34	-1.6
5,397,832	+		Pf6N2E2_4667	0.34	-0.3
5,397,833	-		Pf6N2E2_4667	0.34	-1.2
5,397,833	-		Pf6N2E2_4667	0.34	-1.2
5,398,066	+		Pf6N2E2_4667	0.80	+0.8
5,398,066	+		Pf6N2E2_4667	0.80	-2.1
5,398,066	+		Pf6N2E2_4667	0.80	-2.5
5,398,066	+		Pf6N2E2_4667	0.80	+0.5
5,398,066	+		Pf6N2E2_4667	0.80	-1.3
5,398,067	-		Pf6N2E2_4667	0.81	+0.7
5,398,067	-		Pf6N2E2_4667	0.81	+1.1
5,398,067	-		Pf6N2E2_4667	0.81	-1.0
5,398,126	+				-0.5
5,398,127	-				+1.1
5,398,211	+		Pf6N2E2_4668	0.14	+0.3
5,398,211	+		Pf6N2E2_4668	0.14	-1.3
5,398,211	+		Pf6N2E2_4668	0.14	+1.6
5,398,212	-		Pf6N2E2_4668	0.14	+0.4
5,398,220	+		Pf6N2E2_4668	0.17	-0.6
5,398,220	+		Pf6N2E2_4668	0.17	-0.9
5,398,220	+		Pf6N2E2_4668	0.17	+0.4
5,398,221	-		Pf6N2E2_4668	0.18	+0.7
5,398,221	-		Pf6N2E2_4668	0.18	-1.6
5,398,221	-		Pf6N2E2_4668	0.18	+1.3
5,398,555	+				-1.2
5,398,555	+				+0.8
5,398,555	+				-3.7
5,398,555	+				+3.1
5,398,555	+				+2.6
5,398,555	+				-1.6
5,398,555	+				-0.7
5,398,555	+				-2.1
5,398,556	-				-1.2
5,398,556	-				+1.2
5,398,556	-				+0.0
5,398,556	-				-0.3
5,398,556	-				-1.2
5,398,556	-				+1.4
5,398,556	-				-1.8
5,398,556	-				+0.8
5,398,603	+				-1.1
5,398,604	-				-2.7
5,398,604	-				+0.3
5,398,604	-				+2.3
5,398,604	-				-0.2
5,398,632	+				-3.0
5,398,632	+				+2.5
5,398,632	+				+0.2
5,398,632	+				-0.4
5,398,633	-				+1.2
5,398,633	-				-0.2
5,398,633	-				-2.5
5,398,633	-				+0.3
5,398,668	+		Pf6N2E2_4669	0.17	+1.2
5,398,669	-		Pf6N2E2_4669	0.18	+1.4
5,398,672	-		Pf6N2E2_4669	0.18	-1.5
5,398,672	-		Pf6N2E2_4669	0.18	+0.5
5,398,672	-		Pf6N2E2_4669	0.18	+1.7
5,398,672	-		Pf6N2E2_4669	0.18	-1.2
5,398,672	-		Pf6N2E2_4669	0.18	+0.8
5,398,854	+		Pf6N2E2_4669	0.58	-0.6
5,398,854	+		Pf6N2E2_4669	0.58	-0.8
5,398,855	-		Pf6N2E2_4669	0.59	+1.1
5,398,897	+		Pf6N2E2_4669	0.68	+1.1
5,398,976	+		Pf6N2E2_4669	0.85	-0.1
5,398,986	+		Pf6N2E2_4669	0.88	+1.4
5,398,986	+		Pf6N2E2_4669	0.88	+1.5
5,398,986	+		Pf6N2E2_4669	0.88	-1.0
5,398,986	+		Pf6N2E2_4669	0.88	+0.1
5,398,986	+		Pf6N2E2_4669	0.88	-1.8
5,398,987	-		Pf6N2E2_4669	0.88	-0.1
5,398,987	-		Pf6N2E2_4669	0.88	+1.1
5,398,987	-		Pf6N2E2_4669	0.88	-1.1
5,398,987	-		Pf6N2E2_4669	0.88	-2.5
5,398,987	-		Pf6N2E2_4669	0.88	-1.5
5,398,987	-		Pf6N2E2_4669	0.88	+1.1
5,398,987	-		Pf6N2E2_4669	0.88	+0.8
5,399,020	+				+0.4
5,399,020	+				+1.5
5,399,020	+				-1.8
5,399,020	+				+1.7
5,399,021	-				+0.0
5,399,021	-				+1.8
5,399,072	+				-0.6
5,399,075	+				-2.4
5,399,075	+				+0.7
5,399,075	+				-0.1
5,399,075	+				-0.5
5,399,075	+				-0.2
5,399,076	-				-0.7
5,399,076	-				+1.6