Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4491

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
5,222,411	+		Pf6N2E2_4490	0.15	-0.6
5,222,412	-		Pf6N2E2_4490	0.15	-1.3
5,222,412	-		Pf6N2E2_4490	0.15	-1.4
5,222,412	-		Pf6N2E2_4490	0.15	-1.6
5,222,412	-		Pf6N2E2_4490	0.15	-2.3
5,222,412	-		Pf6N2E2_4490	0.15	-0.8
5,222,429	+		Pf6N2E2_4490	0.17	+1.1
5,222,429	+		Pf6N2E2_4490	0.17	+0.9
5,222,430	-		Pf6N2E2_4490	0.17	-1.3
5,222,430	-		Pf6N2E2_4490	0.17	-0.5
5,222,646	+		Pf6N2E2_4490	0.41	-0.4
5,222,646	+		Pf6N2E2_4490	0.41	+0.5
5,222,647	-		Pf6N2E2_4490	0.41	-1.7
5,222,647	-		Pf6N2E2_4490	0.41	+1.0
5,222,842	-		Pf6N2E2_4490	0.62	+0.6
5,222,844	+		Pf6N2E2_4490	0.62	-0.5
5,222,844	+		Pf6N2E2_4490	0.62	-0.0
5,222,844	+		Pf6N2E2_4490	0.62	+1.1
5,222,844	+		Pf6N2E2_4490	0.62	+0.4
5,222,844	+		Pf6N2E2_4490	0.62	+3.6
5,222,844	+		Pf6N2E2_4490	0.62	-3.5
5,222,844	+		Pf6N2E2_4490	0.62	+0.3
5,222,844	+		Pf6N2E2_4490	0.62	-0.6
5,222,844	+		Pf6N2E2_4490	0.62	+0.6
5,222,844	+		Pf6N2E2_4490	0.62	-0.1
5,222,845	-		Pf6N2E2_4490	0.62	-2.3
5,222,845	-		Pf6N2E2_4490	0.62	+1.5
5,222,845	-		Pf6N2E2_4490	0.62	+0.7
5,222,845	-		Pf6N2E2_4490	0.62	+1.2
5,222,907	+		Pf6N2E2_4490	0.69	-0.1
5,222,992	+		Pf6N2E2_4490	0.78	+1.6
5,223,077	+		Pf6N2E2_4490	0.87	+0.3
5,223,169	+				+0.4
5,223,175	+				-0.8
5,223,175	+				-3.1
5,223,175	+				+1.4
5,223,175	+				+1.4
5,223,175	+				+0.7
5,223,176	-				+0.7
5,223,238	+				-1.5
5,223,239	-				+1.5
5,223,239	-				-1.4
5,223,255	-				+2.6
5,223,255	-				-0.9
5,223,255	-				-2.4
5,223,264	-				-0.6
5,223,319	+				-1.3
5,223,319	+				+0.3
5,223,319	+				-0.7
5,223,319	+				+1.4
5,223,320	-				-1.5
5,223,320	-				-0.7
5,223,320	-				-1.5
5,223,509	-		Pf6N2E2_4491	0.11	+1.8
5,223,509	-		Pf6N2E2_4491	0.11	-0.4
5,223,715	+		Pf6N2E2_4491	0.22	-0.5
5,223,715	+		Pf6N2E2_4491	0.22	+0.8
5,223,955	-		Pf6N2E2_4491	0.36	+0.2
5,223,955	-		Pf6N2E2_4491	0.36	+0.1
5,223,955	-		Pf6N2E2_4491	0.36	+0.5
5,224,025	-		Pf6N2E2_4491	0.40	-2.9
5,224,025	-		Pf6N2E2_4491	0.40	+0.7
5,224,025	-		Pf6N2E2_4491	0.40	-1.6
5,224,358	-		Pf6N2E2_4491	0.58	+0.7
5,224,358	-		Pf6N2E2_4491	0.58	-2.6
5,224,398	-		Pf6N2E2_4491	0.61	+1.1
5,224,398	-		Pf6N2E2_4491	0.61	-2.3
5,224,427	+		Pf6N2E2_4491	0.62	-0.7
5,224,453	+		Pf6N2E2_4491	0.64	+1.8
5,224,454	-		Pf6N2E2_4491	0.64	+0.0
5,224,454	-		Pf6N2E2_4491	0.64	-0.3
5,224,454	-		Pf6N2E2_4491	0.64	-0.7
5,224,475	+		Pf6N2E2_4491	0.65	-2.3
5,224,475	+		Pf6N2E2_4491	0.65	-1.7
5,224,476	-		Pf6N2E2_4491	0.65	-1.9
5,224,609	+		Pf6N2E2_4491	0.72	-1.4
5,224,610	-		Pf6N2E2_4491	0.72	+2.6
5,224,610	-		Pf6N2E2_4491	0.72	-0.9
5,224,668	+		Pf6N2E2_4491	0.76	+1.7
5,224,669	-		Pf6N2E2_4491	0.76	+1.5
5,224,711	+		Pf6N2E2_4491	0.78	-1.8
5,224,711	+		Pf6N2E2_4491	0.78	+0.8
5,224,711	+		Pf6N2E2_4491	0.78	+0.5
5,224,711	+		Pf6N2E2_4491	0.78	-0.9
5,224,711	+		Pf6N2E2_4491	0.78	-2.5
5,224,712	-		Pf6N2E2_4491	0.78	+0.9
5,224,789	+		Pf6N2E2_4491	0.82	+1.3
5,224,789	+		Pf6N2E2_4491	0.82	+1.5
5,224,789	+		Pf6N2E2_4491	0.82	-1.6
5,224,789	+		Pf6N2E2_4491	0.82	-0.1
5,224,789	+		Pf6N2E2_4491	0.82	-1.0
5,224,789	+		Pf6N2E2_4491	0.82	-1.2
5,224,789	+		Pf6N2E2_4491	0.82	+0.8
5,224,789	+		Pf6N2E2_4491	0.82	-2.0
5,224,790	-		Pf6N2E2_4491	0.82	-2.3
5,224,846	+		Pf6N2E2_4491	0.86	+5.3
5,224,846	+		Pf6N2E2_4491	0.86	+1.1
5,224,846	+		Pf6N2E2_4491	0.86	-1.2
5,224,846	+		Pf6N2E2_4491	0.86	+1.4
5,224,846	+		Pf6N2E2_4491	0.86	-1.0
5,224,846	+		Pf6N2E2_4491	0.86	+1.3
5,224,846	+		Pf6N2E2_4491	0.86	+0.7
5,224,846	+		Pf6N2E2_4491	0.86	+2.3
5,224,846	+		Pf6N2E2_4491	0.86	-0.5
5,224,846	+		Pf6N2E2_4491	0.86	-1.5
5,224,846	+		Pf6N2E2_4491	0.86	+0.7
5,224,846	+		Pf6N2E2_4491	0.86	+0.4
5,224,847	-		Pf6N2E2_4491	0.86	+0.5
5,224,847	-		Pf6N2E2_4491	0.86	+1.5
5,224,847	-		Pf6N2E2_4491	0.86	-1.9
5,224,847	-		Pf6N2E2_4491	0.86	+1.7
5,224,847	-		Pf6N2E2_4491	0.86	-2.5
5,224,847	-		Pf6N2E2_4491	0.86	+0.2
5,224,847	-		Pf6N2E2_4491	0.86	+0.5
5,224,847	-		Pf6N2E2_4491	0.86	+1.0
5,224,847	-		Pf6N2E2_4491	0.86	-1.7
5,225,112	+				+0.2
5,225,113	-				-0.1
5,225,178	+				+1.0
5,225,179	-				+0.5
5,225,192	+				+0.9
5,225,282	+		Pf6N2E2_4492	0.10	+1.5
5,225,283	-		Pf6N2E2_4492	0.11	+0.7
5,225,324	+		Pf6N2E2_4492	0.23	+1.4
5,225,325	-		Pf6N2E2_4492	0.23	+0.0
5,225,325	-		Pf6N2E2_4492	0.23	+2.3
5,225,328	+		Pf6N2E2_4492	0.24	-0.3
5,225,329	-		Pf6N2E2_4492	0.24	+0.5
5,225,472	+		Pf6N2E2_4492	0.66	+1.4
5,225,472	+		Pf6N2E2_4492	0.66	-2.5
5,225,473	-		Pf6N2E2_4492	0.67	+0.7
5,225,503	+		Pf6N2E2_4492	0.76	-0.4
5,225,559	+				-2.7
5,225,634	-				-0.8
5,225,645	-				+0.8
5,225,645	-				+1.1
5,225,687	+				-0.5
5,225,906	+		Pf6N2E2_4493	0.41	-2.4
5,225,906	+		Pf6N2E2_4493	0.41	-0.9
5,225,906	+		Pf6N2E2_4493	0.41	+1.3
5,225,906	+		Pf6N2E2_4493	0.41	+2.0
5,225,907	-		Pf6N2E2_4493	0.41	-1.0
5,225,998	+		Pf6N2E2_4493	0.61	-2.4
5,225,998	+		Pf6N2E2_4493	0.61	+0.3
5,225,999	-		Pf6N2E2_4493	0.61	+0.0
5,225,999	-		Pf6N2E2_4493	0.61	-1.7
5,226,009	+		Pf6N2E2_4493	0.63	-0.1
5,226,009	+		Pf6N2E2_4493	0.63	-2.7
5,226,009	+		Pf6N2E2_4493	0.63	+0.2
5,226,009	+		Pf6N2E2_4493	0.63	-1.2
5,226,009	+		Pf6N2E2_4493	0.63	+0.9
5,226,009	+		Pf6N2E2_4493	0.63	+0.2
5,226,010	-		Pf6N2E2_4493	0.63	+1.1
5,226,010	-		Pf6N2E2_4493	0.63	+1.2
5,226,010	-		Pf6N2E2_4493	0.63	+1.5
5,226,010	-		Pf6N2E2_4493	0.63	+2.0
5,226,069	+		Pf6N2E2_4493	0.76	+0.5
5,226,069	+		Pf6N2E2_4493	0.76	+2.1
5,226,070	-		Pf6N2E2_4493	0.76	+1.4
5,226,070	-		Pf6N2E2_4493	0.76	+2.4
5,226,070	-		Pf6N2E2_4493	0.76	+1.2
5,226,070	-		Pf6N2E2_4493	0.76	-0.1