Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3393

Experiment: Hydroxylamine 0.5 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hydroxylamine 0.5 M
3,931,110	+		Pf6N2E2_3392	0.64	-2.3
3,931,452	-				+1.4
3,931,477	+				+1.0
3,931,478	-				-2.3
3,931,581	+				-1.1
3,931,581	+				-2.0
3,931,582	-				-1.1
3,931,582	-				-1.0
3,931,613	+				+1.7
3,931,613	+				+1.2
3,931,664	+				+0.2
3,931,664	+				+0.1
3,931,664	+				+0.8
3,931,665	-				-1.2
3,931,697	+				-1.3
3,931,697	+				-2.3
3,931,697	+				-2.3
3,931,697	+				+0.7
3,931,698	-				+0.1
3,931,723	+				+1.0
3,931,723	+				-1.7
3,931,729	-				-0.3
3,931,774	+				+0.3
3,931,814	+				-2.6
3,931,814	+				-0.0
3,931,869	-				-1.4
3,931,880	+				+0.3
3,931,880	+				-0.1
3,931,881	-				+0.7
3,931,881	-				+2.3
3,931,924	+				+0.5
3,931,924	+				-3.1
3,931,934	+				+0.2
3,931,935	-				-0.9
3,932,016	+				+0.4
3,932,016	+				-0.8
3,932,016	+				-2.2
3,932,016	+				-0.2
3,932,016	+				-2.5
3,932,017	-				+2.0
3,932,017	-				+0.9
3,932,017	-				+1.1
3,932,017	-				+0.6
3,932,020	-				+0.8
3,932,036	+				-1.7
3,932,095	+				-0.5
3,932,095	+				-0.5
3,932,095	+				+0.6
3,932,095	+				+0.1
3,932,096	-				-1.1
3,932,096	-				+0.6
3,932,096	-				+0.3
3,932,096	-				-2.3
3,932,096	-				-1.3
3,932,096	-				+0.2
3,932,096	-				+1.6
3,932,166	-		Pf6N2E2_3393	0.21	-1.9
3,932,208	+		Pf6N2E2_3393	0.29	+0.3
3,932,209	-		Pf6N2E2_3393	0.29	+0.4
3,932,209	-		Pf6N2E2_3393	0.29	-1.1
3,932,209	-		Pf6N2E2_3393	0.29	+0.5
3,932,209	-		Pf6N2E2_3393	0.29	-0.4
3,932,209	-		Pf6N2E2_3393	0.29	-2.9
3,932,209	-		Pf6N2E2_3393	0.29	-0.8
3,932,332	+		Pf6N2E2_3393	0.51	-0.0
3,932,332	+		Pf6N2E2_3393	0.51	-1.6
3,932,333	-		Pf6N2E2_3393	0.51	-1.3
3,932,333	-		Pf6N2E2_3393	0.51	-1.3
3,932,333	-		Pf6N2E2_3393	0.51	-1.5
3,932,333	-		Pf6N2E2_3393	0.51	+1.0
3,932,344	-		Pf6N2E2_3393	0.53	-1.9
3,932,344	-		Pf6N2E2_3393	0.53	+1.2
3,932,379	+		Pf6N2E2_3393	0.59	-2.7
3,932,563	+				+2.4
3,932,564	-				+0.4
3,932,632	-				+0.8
3,932,651	+				-0.6
3,932,652	-				+1.0
3,932,652	-				+1.5
3,932,652	-				-1.0
3,932,652	-				-1.8
3,932,652	-				-2.5
3,932,652	-				+0.3
3,932,652	-				-3.4
3,932,679	+				+0.2
3,932,680	-				+2.9
3,932,680	-				-0.1
3,932,680	-				+0.3
3,932,763	+				+0.4
3,932,763	+				+2.2
3,932,763	+				-2.5
3,932,763	+				+0.2
3,932,763	+				+0.8
3,932,764	-				+0.2
3,932,764	-				+0.5
3,932,768	+				+0.3
3,932,768	+				-0.1
3,932,768	+				+0.3
3,932,768	+				+0.2
3,932,768	+				-1.1
3,932,769	-				-2.8
3,932,769	-				-0.6
3,932,769	-				+1.8
3,932,769	-				-0.0
3,932,808	+		Pf6N2E2_3394	0.13	+1.2
3,932,808	+		Pf6N2E2_3394	0.13	-0.1
3,932,809	-		Pf6N2E2_3394	0.13	+2.5
3,932,849	+		Pf6N2E2_3394	0.17	+0.1
3,932,849	+		Pf6N2E2_3394	0.17	+1.0
3,932,849	+		Pf6N2E2_3394	0.17	-2.8
3,932,850	-		Pf6N2E2_3394	0.17	-2.1
3,932,850	-		Pf6N2E2_3394	0.17	-1.5
3,932,850	-		Pf6N2E2_3394	0.17	+0.3
3,932,850	-		Pf6N2E2_3394	0.17	+0.8
3,932,921	+		Pf6N2E2_3394	0.22	+1.0
3,932,921	+		Pf6N2E2_3394	0.22	-3.3
3,932,921	+		Pf6N2E2_3394	0.22	+1.0
3,932,922	-		Pf6N2E2_3394	0.22	+0.9
3,932,933	+		Pf6N2E2_3394	0.23	+1.0
3,932,934	-		Pf6N2E2_3394	0.23	+1.3
3,933,018	+		Pf6N2E2_3394	0.30	+0.9
3,933,019	-		Pf6N2E2_3394	0.30	+1.7
3,933,078	+		Pf6N2E2_3394	0.35	-2.3
3,933,078	+		Pf6N2E2_3394	0.35	+1.1
3,933,079	-		Pf6N2E2_3394	0.35	-2.3
3,933,079	-		Pf6N2E2_3394	0.35	-2.9
3,933,079	-		Pf6N2E2_3394	0.35	+0.4
3,933,079	-		Pf6N2E2_3394	0.35	-0.8
3,933,079	-		Pf6N2E2_3394	0.35	-1.7
3,933,123	+		Pf6N2E2_3394	0.39	+0.2
3,933,124	-		Pf6N2E2_3394	0.39	+0.8
3,933,126	+		Pf6N2E2_3394	0.39	+1.5
3,933,126	+		Pf6N2E2_3394	0.39	-2.5
3,933,126	+		Pf6N2E2_3394	0.39	-1.1
3,933,127	-		Pf6N2E2_3394	0.39	-1.0
3,933,169	+		Pf6N2E2_3394	0.43	+0.2
3,933,169	+		Pf6N2E2_3394	0.43	+1.8
3,933,169	+		Pf6N2E2_3394	0.43	+0.1
3,933,170	-		Pf6N2E2_3394	0.43	-1.5
3,933,170	-		Pf6N2E2_3394	0.43	+1.0
3,933,493	-		Pf6N2E2_3394	0.69	-1.1
3,933,493	-		Pf6N2E2_3394	0.69	-3.2
3,933,512	+		Pf6N2E2_3394	0.71	+0.9
3,933,512	+		Pf6N2E2_3394	0.71	-0.6
3,933,512	+		Pf6N2E2_3394	0.71	+1.8
3,933,513	-		Pf6N2E2_3394	0.71	+2.0
3,933,513	-		Pf6N2E2_3394	0.71	+1.1
3,933,513	-		Pf6N2E2_3394	0.71	-0.5